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IMGVR_UViG_3300028355_000092-3300028355-Ga0306888_10138212
Arc-VirIMGVR_UViG_3300028355_000092-3300028355-Ga0306888_10138212
Identity
- Kingdom:
- archaea
Quality
85.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-83
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26683.1 best | Tyr_recomb_halo_N | 89.3 | 1.80e-25 | 98.5% | 100.0% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gouA03 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.63 | 51.0 | 3.75e-01 | 95.4% | 66.0% |
| 6xiuA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 43.0 | 3.82e-01 | 100.0% | 50.5% |
| 5h9cA00 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 39.0 | 3.69e-01 | 78.5% | 92.3% |
D2
high
residues 98-201
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a0pA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.90 | 76.0 | 8.08e-01 | 95.2% | 100.0% |
| 3nrwA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.88 | 80.0 | 8.10e-01 | 99.0% | 97.1% |
| 2kd1A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.81 | 72.0 | 6.92e-01 | 100.0% | 84.7% |
| 1z19A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.79 | 69.0 | 7.06e-01 | 99.0% | 98.0% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.78 | 65.0 | 6.85e-01 | 100.0% | 98.9% |
| 2kkpA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.74 | 65.0 | 6.22e-01 | 99.0% | 83.8% |
| 1xo0A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.70 | 60.0 | 5.88e-01 | 95.2% | 86.5% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.64 | 51.0 | 4.48e-01 | 85.6% | 83.1% |
| 3lwjA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 48.0 | 3.91e-01 | 81.7% | 65.3% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.62 | 49.0 | 4.59e-01 | 84.6% | 87.6% |
| 3ol4A02 | 1.10.10.2390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 36.0 | 4.35e-01 | 71.2% | 100.0% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.61 | 48.0 | 4.82e-01 | 88.5% | 84.6% |
| 4fxdA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.60 | 45.0 | 3.94e-01 | 77.9% | 85.6% |
| 1zp2A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 41.0 | 4.01e-01 | 89.4% | 63.5% |
| 2lsgA00 | 1.20.58.1280 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DNA repair protein Rev1, C-terminal domain | 0.59 | 41.0 | 4.25e-01 | 76.0% | 77.3% |
| 1grlB01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.58 | 49.0 | 3.79e-01 | 94.2% | 46.3% |
| 4l3uA00 | 1.20.1480.40 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 | 0.57 | 50.0 | 4.78e-01 | 100.0% | 87.8% |
| 1k3kA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.56 | 45.0 | 4.11e-01 | 91.3% | 70.5% |
| 3l09A01 | 1.20.58.1460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 38.0 | 3.94e-01 | 71.2% | 93.9% |
| 4lctB00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 39.0 | 2.75e-01 | 75.0% | 43.1% |
| 5fb0A02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.53 | 44.0 | 4.32e-01 | 91.3% | 84.8% |
| 2sasA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 48.0 | 3.94e-01 | 100.0% | 76.8% |
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.50 | 42.0 | 3.57e-01 | 90.4% | 83.8% |
| 1ezfC00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.50 | 40.0 | 2.91e-01 | 87.5% | 85.0% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4097981 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.90 | 84.0 | 8.39e-01 | 99.0% | 97.1% |
| 4385779 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.90 | 85.0 | 8.04e-01 | 100.0% | 92.5% |
| 4520087 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.89 | 82.0 | 8.36e-01 | 97.1% | 100.0% |
| 4130034 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.89 | 83.0 | 8.16e-01 | 98.1% | 92.7% |
| 4667626 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.89 | 81.0 | 8.33e-01 | 96.2% | 100.0% |
| 4040148 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.89 | 81.0 | 8.29e-01 | 96.2% | 100.0% |
| 4069480 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.89 | 83.0 | 8.16e-01 | 99.0% | 93.6% |
| 4063794 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.89 | 81.0 | 7.94e-01 | 97.1% | 90.9% |
| 3504160 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.88 | 82.0 | 8.07e-01 | 98.1% | 92.7% |
| 4579981 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.88 | 82.0 | 8.04e-01 | 99.0% | 92.7% |
| 4566333 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.88 | 80.0 | 8.22e-01 | 97.1% | 100.0% |
| 4220256 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.88 | 83.0 | 8.13e-01 | 100.0% | 94.5% |
| 4655797 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.88 | 76.0 | 7.97e-01 | 93.3% | 100.0% |
| 4362692 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.87 | 79.0 | 8.03e-01 | 95.2% | 100.0% |
| 4142699 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.87 | 79.0 | 8.05e-01 | 99.0% | 99.0% |
| 4160987 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.87 | 80.0 | 7.87e-01 | 97.1% | 91.8% |
| 4008705 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.87 | 82.0 | 7.91e-01 | 100.0% | 90.4% |
| 4396981 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.87 | 79.0 | 8.08e-01 | 98.1% | 100.0% |
| 4140783 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.87 | 79.0 | 8.13e-01 | 98.1% | 100.0% |
| 5054950 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.87 | 81.0 | 7.51e-01 | 98.1% | 86.4% |
| 3969537 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.87 | 78.0 | 8.00e-01 | 96.2% | 100.0% |
| 4318189 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.86 | 80.0 | 8.05e-01 | 99.0% | 100.0% |
| 4406523 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.86 | 79.0 | 7.81e-01 | 100.0% | 92.7% |
| 4406227 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.86 | 79.0 | 7.42e-01 | 98.1% | 96.0% |
| 4979940 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.86 | 78.0 | 7.70e-01 | 100.0% | 91.8% |
| 4465167 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.86 | 79.0 | 7.74e-01 | 98.1% | 97.3% |
| 4133754 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.86 | 80.0 | 7.72e-01 | 100.0% | 94.8% |
| 4199344 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.86 | 79.0 | 7.60e-01 | 98.1% | 94.8% |
| 4175280 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.85 | 77.0 | 7.74e-01 | 96.2% | 100.0% |
| 4377812 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.85 | 77.0 | 7.88e-01 | 96.2% | 100.0% |
| 4487415 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.85 | 79.0 | 7.65e-01 | 100.0% | 89.6% |
| 4053119 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.85 | 80.0 | 7.59e-01 | 100.0% | 90.8% |
| None | — | 0.85 | 78.0 | 7.44e-01 | 98.1% | 100.0% | |
| 4090274 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.85 | 77.0 | 7.76e-01 | 97.1% | 98.1% |
| 4969225 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.85 | 77.0 | 7.54e-01 | 97.1% | 90.9% |
| 4168571 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.85 | 79.0 | 7.74e-01 | 98.1% | 93.6% |
| 4566550 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.85 | 76.0 | 7.82e-01 | 99.0% | 100.0% |
| 4064194 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.85 | 78.0 | 7.39e-01 | 98.1% | 100.0% |
| 4173849 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.85 | 77.0 | 7.56e-01 | 99.0% | 91.8% |
| 5043403 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.83 | 70.0 | 7.14e-01 | 92.3% | 92.0% |
| 5052501 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.83 | 75.0 | 7.69e-01 | 98.1% | 100.0% |
| 4074907 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.83 | 77.0 | 7.61e-01 | 100.0% | 97.3% |
| 4051052 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.83 | 75.0 | 7.38e-01 | 99.0% | 91.8% |
| 4172485 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.82 | 73.0 | 7.20e-01 | 100.0% | 90.9% |
| 4038795 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.82 | 73.0 | 7.19e-01 | 96.2% | 100.0% |
| 4964438 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.82 | 74.0 | 7.01e-01 | 99.0% | 83.3% |
| 5055663 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.81 | 72.0 | 6.60e-01 | 99.0% | 75.4% |
| 4034350 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.81 | 72.0 | 6.99e-01 | 99.0% | 87.0% |
| 170034 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.81 | 72.0 | 7.11e-01 | 100.0% | 90.9% |
| 4964250 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.77 | 71.0 | 6.87e-01 | 100.0% | 91.3% |
| 5082760 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.77 | 70.0 | 6.74e-01 | 99.0% | 87.8% |
| 4981965 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.77 | 70.0 | 7.06e-01 | 100.0% | 99.0% |
| 4629318 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.77 | 69.0 | 6.92e-01 | 98.1% | 98.1% |
| 3587238 | 186.1.1.3 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_5 | 0.76 | 66.0 | 6.59e-01 | 99.0% | 93.3% |
| 3943489 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.76 | 68.0 | 6.95e-01 | 98.1% | 100.0% |
| 136330 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.74 | 65.0 | 6.38e-01 | 99.0% | 89.9% |
| 4458305 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.74 | 66.0 | 6.43e-01 | 100.0% | 89.6% |
| 3885624 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.68 | 57.0 | 5.42e-01 | 89.4% | 87.5% |
| 4443691 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.68 | 42.0 | 4.74e-01 | 77.9% | 81.2% |
| 3405089 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.62 | 55.0 | 3.50e-01 | 96.2% | 52.9% |
| 3938942 | 3198.1.1.1 ↗ | alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA | 0.61 | 47.0 | 4.39e-01 | 80.8% | 97.6% |
| 3643996 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.60 | 52.0 | 3.39e-01 | 95.2% | 47.3% |
| 3996406 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.57 | 34.0 | 3.99e-01 | 99.0% | 87.1% |
| 3561601 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 39.0 | 3.44e-01 | 93.3% | 48.7% |
| 3236455 | 3470.1.1.35 ↗ | extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › DUF19 | 0.54 | 46.0 | 3.89e-01 | 97.1% | 77.4% |
| 3411779 | 109.25.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › PF26588 | 0.53 | 37.0 | 3.65e-01 | 73.1% | 68.7% |
| 4960664 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 44.0 | 3.73e-01 | 94.2% | 65.0% |
| 3628729 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 45.0 | 2.73e-01 | 100.0% | 57.7% |