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IMGVR_UViG_3300028358_000008-3300028358-Ga0306904_10057918

Arc-Vir

IMGVR_UViG_3300028358_000008-3300028358-Ga0306904_10057918

Quality

84.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-46
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qbkB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.61 47.0 2.55e-01 86.7% 6.0%
2nyvA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 47.0 4.40e-01 100.0% 79.7%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.94e-01 84.4% 78.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3281272 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.64 47.0 3.43e-01 80.0% 37.6%
3501989 4143.1.1.0 a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like 0.63 51.0 3.71e-01 100.0% 64.7%
4313221 2004.1.1.552 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T4SS-DNA_transf, TraG-D_C 0.61 43.0 2.48e-01 77.8% 11.2%
3613552 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 48.0 3.38e-01 100.0% 25.6%
3585647 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 41.0 2.59e-01 100.0% 21.6%
3547222 102.1.1.114 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF26701 0.51 38.0 3.59e-01 100.0% 65.0%