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IMGVR_UViG_3300028453_000003-3300028453-Ga0307246_100016681
Arc-VirIMGVR_UViG_3300028453_000003-3300028453-Ga0307246_100016681
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-143
Domain cluster:
rep: JBCH_GD18_4_SO25_S179_scaffold_97345_prodigal-single.1__X__X__00005__D80-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01844.30 best | HNH | 31.2 | 2.70e-07 | 35.1% | 97.9% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ccyA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 39.0 | 3.79e-01 | 100.0% | 74.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937899 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.80 | 50.0 | 6.05e-01 | 85.8% | 93.3% |
| 3739322 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.55 | 41.0 | 3.58e-01 | 76.1% | 52.0% |
| 4943269 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.50 | 45.0 | 3.75e-01 | 100.0% | 81.7% |