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IMGVR_UViG_3300028453_000051-3300028453-Ga0307246_10103447
Arc-VirIMGVR_UViG_3300028453_000051-3300028453-Ga0307246_10103447
Identity
- Kingdom:
- archaea
Quality
63.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-11_39-80
Domain cluster:
rep: IMGVR_UViG_3300013746_000012-3300013746-Ga0116843_10001871__D6-11_111-154
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.69 | 47.0 | 4.75e-01 | 73.6% | 72.7% |
| 2pjzA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 36.0 | 2.28e-01 | 100.0% | 11.1% |
| 6wcsA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.62 | 52.0 | 3.58e-01 | 100.0% | 59.8% |
| 3c0fB00 | 3.30.1490.340 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.61 | 41.0 | 3.64e-01 | 71.7% | 95.3% |
| 3l1aA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 42.0 | 2.88e-01 | 79.2% | 31.5% |
| 1r89A04 | 3.30.70.1550 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Archaeal tRNA CCA-adding enzyme catalytic domain | 0.56 | 40.0 | 4.37e-01 | 98.1% | 93.2% |
| 3rbyA02 | 2.40.128.310 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain | 0.55 | 48.0 | 4.00e-01 | 100.0% | 93.7% |
| 2kgjA00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.54 | 46.0 | 3.82e-01 | 100.0% | 88.2% |
| 1lf6A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 45.0 | 2.98e-01 | 100.0% | 34.8% |
| 6vilA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.53 | 39.0 | 2.99e-01 | 83.0% | 35.9% |
| 4g2sA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.53 | 45.0 | 3.65e-01 | 98.1% | 96.2% |
| 1x4hA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 45.0 | 3.61e-01 | 100.0% | 74.8% |
| 5jpnC01 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.51 | 43.0 | 3.18e-01 | 100.0% | 36.8% |
| 2q0iA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 40.0 | 2.58e-01 | 94.3% | 75.7% |
| 7uinD01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.50 | 37.0 | 2.77e-01 | 86.8% | 64.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1505155 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.69 | 48.0 | 4.73e-01 | 73.6% | 71.4% |
| None | — | 0.67 | 60.0 | 3.68e-01 | 100.0% | 20.0% | |
| 185092 | 6115.1.1.1 ↗ | a+b three layers › AF1514-like › AF1514-like › AF1514-like › DUF5619 | 0.61 | 41.0 | 3.64e-01 | 71.7% | 95.3% |
| 3436518 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.61 | 51.0 | 3.84e-01 | 100.0% | 82.8% |
| 4235207 | 4959.1.1.1 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 | 0.60 | 51.0 | 3.60e-01 | 98.1% | 91.4% |
| 4014784 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.59 | 51.0 | 4.24e-01 | 100.0% | 99.0% |
| 3798285 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 50.0 | 4.42e-01 | 100.0% | 91.3% |
| 4498093 | 2003.1.1.85 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SpnB_Rossmann | 0.54 | 44.0 | 3.04e-01 | 100.0% | 98.6% |
| 3279855 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.53 | 46.0 | 3.22e-01 | 100.0% | 98.9% |
| 4019457 | 213.1.1.77 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1, Acetyltransf_7 | 0.53 | 37.0 | 2.60e-01 | 77.4% | 56.2% |
| 3960107 | 2003.1.1.85 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SpnB_Rossmann | 0.53 | 44.0 | 3.11e-01 | 100.0% | 93.5% |
| 3922094 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.52 | 44.0 | 2.69e-01 | 98.1% | 99.5% |
| 3287252 | 2003.1.1.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Beta-ketacyl_N | 0.52 | 45.0 | 2.99e-01 | 98.1% | 95.7% |
| 3949950 | 2003.1.1.85 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SpnB_Rossmann | 0.52 | 45.0 | 3.02e-01 | 100.0% | 90.4% |
| 3650065 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.51 | 37.0 | 2.51e-01 | 83.0% | 50.4% |
| 4355578 | 304.111.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS_C | 0.50 | 41.0 | 3.00e-01 | 100.0% | 64.0% |