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IMGVR_UViG_3300028481_000322-3300028481-Ga0233366_100009651
Arc-VirIMGVR_UViG_3300028481_000322-3300028481-Ga0233366_100009651
Identity
- Kingdom:
- archaea
Quality
92.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-71
Domain cluster:
representative
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ehdA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.90 | 84.0 | 6.28e-01 | 100.0% | 44.6% |
| 7o62B01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.88 | 80.0 | 6.27e-01 | 100.0% | 50.8% |
| 1s2gB00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.80 | 74.0 | 5.44e-01 | 100.0% | 47.3% |
| 1t1jA00 | 3.40.50.10400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein PA1492 | 0.79 | 72.0 | 5.98e-01 | 100.0% | 66.4% |
| 4fe7A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 44.0 | 3.70e-01 | 100.0% | 37.6% |
| 4d02A02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.68 | 62.0 | 4.85e-01 | 100.0% | 62.2% |
| 3fnbA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.67 | 56.0 | 3.84e-01 | 92.9% | 52.2% |
| 1cnzA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.66 | 59.0 | 3.72e-01 | 100.0% | 75.8% |
| 4c1bA02 | 3.40.50.12700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 54.0 | 4.82e-01 | 94.3% | 72.8% |
| 1khtB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 56.0 | 4.16e-01 | 100.0% | 60.2% |
| 5hn3A00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.63 | 56.0 | 3.60e-01 | 100.0% | 73.5% |
| 2bjiB02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.63 | 47.0 | 3.82e-01 | 100.0% | 43.1% |
| 2v4uA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.62 | 57.0 | 3.76e-01 | 100.0% | 26.2% |
| 1pswA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 56.0 | 4.37e-01 | 100.0% | 54.5% |
| 1qrvA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.61 | 36.0 | 3.62e-01 | 97.1% | 56.2% |
| 2i4lB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.60 | 54.0 | 4.76e-01 | 100.0% | 69.3% |
| 3tqtB01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 53.0 | 4.48e-01 | 100.0% | 98.3% |
| 1jmvA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 51.0 | 4.19e-01 | 100.0% | 75.0% |
| 2jaxA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 52.0 | 4.37e-01 | 100.0% | 97.6% |
| 2fepA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 47.0 | 3.84e-01 | 100.0% | 45.9% |
| 7kdyB01 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.59 | 49.0 | 3.87e-01 | 92.9% | 48.0% |
| 2x7xA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 52.0 | 4.27e-01 | 100.0% | 64.6% |
| 4nqrA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 52.0 | 4.06e-01 | 100.0% | 54.8% |
| 3uwpA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 46.0 | 3.25e-01 | 85.7% | 36.4% |
| 2jh3A02 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 44.0 | 3.74e-01 | 100.0% | 48.0% |
| 2qu7A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 45.0 | 3.78e-01 | 100.0% | 47.3% |
| 3huuC02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 49.0 | 4.06e-01 | 100.0% | 63.9% |
| 1mrzA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 49.0 | 3.83e-01 | 98.6% | 77.8% |
| 5hsgA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 49.0 | 4.13e-01 | 100.0% | 68.0% |
| 1ba2A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 49.0 | 4.11e-01 | 100.0% | 68.0% |
| 3luyA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 41.0 | 3.50e-01 | 100.0% | 47.4% |
| 4y9tA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 48.0 | 3.90e-01 | 100.0% | 59.3% |
| 2gh9A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 49.0 | 3.65e-01 | 100.0% | 75.3% |
| 3jzjA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 48.0 | 3.57e-01 | 100.0% | 72.9% |
| 3ke8A01 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.56 | 48.0 | 4.19e-01 | 100.0% | 94.7% |
| 3m20A00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.56 | 36.0 | 3.94e-01 | 80.0% | 79.7% |
| 2vy9A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.56 | 46.0 | 3.99e-01 | 94.3% | 87.7% |
| 3hs3A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 44.0 | 3.76e-01 | 92.9% | 84.9% |
| 1f2dA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 47.0 | 4.24e-01 | 100.0% | 92.2% |
| 7febA03 | 3.40.50.12790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 | 0.53 | 46.0 | 4.28e-01 | 100.0% | 100.0% |
| 1ixcA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 45.0 | 4.10e-01 | 100.0% | 94.0% |
| 4rk2A00 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 45.0 | 2.87e-01 | 100.0% | 75.1% |
| 3ugsB00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.52 | 45.0 | 3.29e-01 | 100.0% | 73.1% |
| 4c0zA02 | 1.10.150.480 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.52 | 37.0 | 3.43e-01 | 90.0% | 56.2% |
| 3cs3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 44.0 | 3.63e-01 | 100.0% | 65.9% |
| 2in3A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 38.0 | 3.68e-01 | 100.0% | 70.4% |
| 7ae2A01 | 1.20.120.580 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like | 0.51 | 41.0 | 3.44e-01 | 94.3% | 85.4% |
| 6yj5q01 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.51 | 43.0 | 3.68e-01 | 100.0% | 61.0% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2723402 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.90 | 85.0 | 6.27e-01 | 100.0% | 44.0% |
| 4423472 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.86 | 79.0 | 5.95e-01 | 100.0% | 49.4% |
| 3590973 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.84 | 78.0 | 5.99e-01 | 100.0% | 49.0% |
| 2410571 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.84 | 77.0 | 6.01e-01 | 100.0% | 50.4% |
| 10092 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.79 | 73.0 | 5.40e-01 | 100.0% | 46.7% |
| 4372753 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.75 | 54.0 | 4.67e-01 | 100.0% | 49.1% |
| 4190437 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.75 | 53.0 | 4.60e-01 | 100.0% | 48.2% |
| 4542132 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 63.0 | 4.72e-01 | 100.0% | 63.4% |
| 4145524 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.68 | 35.0 | 3.61e-01 | 88.6% | 52.3% |
| None | — | 0.68 | 59.0 | 4.37e-01 | 100.0% | 54.7% | |
| 3456221 | 2004.1.1.163 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KTI12 | 0.67 | 58.0 | 5.30e-01 | 100.0% | 83.2% |
| 3608799 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.67 | 58.0 | 4.06e-01 | 100.0% | 56.3% |
| 3498414 | 2007.15.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase | 0.67 | 59.0 | 4.37e-01 | 100.0% | 41.1% |
| 4999225 | 7545.1.1.0 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like | 0.66 | 58.0 | 4.96e-01 | 100.0% | 97.4% |
| 3516237 | 2003.1.10.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Ins134_P3_kin_N | 0.65 | 43.0 | 4.10e-01 | 100.0% | 56.5% |
| 4972899 | 2007.1.14.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › CbiX | 0.65 | 55.0 | 4.57e-01 | 100.0% | 54.2% |
| 4309099 | 2003.1.1.120 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA | 0.64 | 50.0 | 3.77e-01 | 94.3% | 34.3% |
| 4285250 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.62 | 51.0 | 4.22e-01 | 100.0% | 49.2% |
| 4069072 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.62 | 48.0 | 4.32e-01 | 100.0% | 59.0% |
| 4980903 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.61 | 52.0 | 4.28e-01 | 100.0% | 79.3% |
| 4030963 | 7512.1.1.35 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Asp1 | 0.61 | 52.0 | 3.90e-01 | 100.0% | 65.8% |
| 4352402 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.58 | 51.0 | 4.10e-01 | 100.0% | 54.3% |
| 4987616 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.57 | 48.0 | 3.58e-01 | 98.6% | 47.0% |
| 5052011 | 2007.2.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins | 0.57 | 50.0 | 3.92e-01 | 100.0% | 57.4% |
| 4666010 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.55 | 49.0 | 4.35e-01 | 100.0% | 69.0% |
| 5010036 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.54 | 45.0 | 3.81e-01 | 100.0% | 99.2% |
| 4302854 | 7510.1.1.1 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh | 0.54 | 45.0 | 3.74e-01 | 100.0% | 82.9% |
| 2050062 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.53 | 45.0 | 4.11e-01 | 100.0% | 83.8% |
| 3394718 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.53 | 36.0 | 3.79e-01 | 97.1% | 77.8% |
| 1252850 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.53 | 45.0 | 4.11e-01 | 100.0% | 82.7% |
| 4979210 | 7566.1.1.2 ↗ | a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N | 0.51 | 43.0 | 3.25e-01 | 97.1% | 50.8% |
| 4955585 | 2007.1.5.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG | 0.51 | 45.0 | 4.03e-01 | 100.0% | 71.0% |