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IMGVR_UViG_3300028568_000046-3300028568-Ga0255345_100206326
Arc-VirIMGVR_UViG_3300028568_000046-3300028568-Ga0255345_100206326
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-140
Domain cluster:
rep: IMGVR_UViG_3300001480_000052-3300001480-rank13_1001986620__D1-111
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04055.28 best | Radical_SAM | 43.6 | 5.10e-11 | 64.3% | 51.2% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4njhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.87 | 80.0 | 6.77e-01 | 94.3% | 70.3% |
| 3c8fA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.85 | 78.0 | 6.26e-01 | 95.7% | 67.3% |
| 3u31A01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.68 | 48.0 | 4.54e-01 | 71.4% | 83.5% |
| 3pkiA01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.65 | 45.0 | 3.99e-01 | 71.4% | 83.3% |
| 1yc5A01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.65 | 45.0 | 4.45e-01 | 71.4% | 90.7% |
| 2b4yA01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.64 | 45.0 | 4.42e-01 | 71.4% | 92.8% |
| 2x41A02 | 3.40.50.1700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain | 0.63 | 50.0 | 4.03e-01 | 84.3% | 94.2% |
| 3bg3A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 49.0 | 3.78e-01 | 87.1% | 63.9% |
| 3vylA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.60 | 50.0 | 3.89e-01 | 88.6% | 73.1% |
| 1z41A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 51.0 | 3.85e-01 | 92.9% | 73.3% |
| 3paoB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 50.0 | 3.87e-01 | 91.4% | 66.6% |
| 1losA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 46.0 | 4.02e-01 | 82.9% | 82.4% |
| 4cczA01 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.59 | 47.0 | 3.60e-01 | 84.3% | 72.0% |
| 1gvfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 49.0 | 3.92e-01 | 91.4% | 68.4% |
| 2uvaG02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.56 | 45.0 | 3.48e-01 | 84.3% | 99.3% |
| 4wzzA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 44.0 | 4.22e-01 | 82.9% | 91.2% |
| 1wv2A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 47.0 | 4.02e-01 | 92.1% | 67.0% |
| 3vdhA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 46.0 | 3.58e-01 | 92.1% | 73.6% |
| 4d8lA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.55 | 46.0 | 3.67e-01 | 92.9% | 57.1% |
| 3v75A01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 45.0 | 3.67e-01 | 91.4% | 54.2% |
| 3brsA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 43.0 | 4.42e-01 | 85.7% | 94.8% |
| 4gx0B04 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 41.0 | 4.29e-01 | 81.4% | 87.8% |
| 3dmyA02 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.53 | 40.0 | 4.08e-01 | 92.1% | 79.3% |
| 1vd6A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.53 | 44.0 | 3.86e-01 | 92.1% | 76.6% |
| 3r2uB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 39.0 | 3.28e-01 | 82.9% | 44.4% |
| 3efoB04 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.52 | 43.0 | 3.64e-01 | 91.4% | 86.9% |
| 7uvpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 3.38e-01 | 87.9% | 93.6% |
| 2f48A01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 44.0 | 3.51e-01 | 94.3% | 77.9% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1954222 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.92 | 84.0 | 6.79e-01 | 95.0% | 65.6% |
| 3965152 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.92 | 84.0 | 7.23e-01 | 95.0% | 66.0% |
| 5023330 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.91 | 83.0 | 6.72e-01 | 95.0% | 72.1% |
| 4277885 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.91 | 87.0 | 7.30e-01 | 100.0% | 68.0% |
| 4991319 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.91 | 82.0 | 6.88e-01 | 93.6% | 67.9% |
| 4995167 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.90 | 82.0 | 6.63e-01 | 94.3% | 71.2% |
| 4279772 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.90 | 81.0 | 6.58e-01 | 92.9% | 67.7% |
| 4279469 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.90 | 86.0 | 7.36e-01 | 100.0% | 67.3% |
| 5067065 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.90 | 82.0 | 6.58e-01 | 95.0% | 72.7% |
| 4098501 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.90 | 84.0 | 6.76e-01 | 97.9% | 64.5% |
| 4303997 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.89 | 86.0 | 7.06e-01 | 100.0% | 68.7% |
| 4521555 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.89 | 80.0 | 6.47e-01 | 93.6% | 69.4% |
| 4313457 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.89 | 80.0 | 6.72e-01 | 93.6% | 64.5% |
| 4929229 | 2002.1.1.232 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 | 0.89 | 79.0 | 6.54e-01 | 92.9% | 69.6% |
| 4936106 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.89 | 82.0 | 6.91e-01 | 96.4% | 67.4% |
| 5021167 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.89 | 79.0 | 6.35e-01 | 92.1% | 68.2% |
| 4337349 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.89 | 81.0 | 6.78e-01 | 95.0% | 70.3% |
| 4984856 | 2002.1.1.232 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 | 0.89 | 80.0 | 6.39e-01 | 93.6% | 69.4% |
| 5024568 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.89 | 80.0 | 6.80e-01 | 93.6% | 67.9% |
| 4599886 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 81.0 | 6.75e-01 | 95.0% | 67.7% |
| 4932050 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 81.0 | 6.97e-01 | 95.0% | 66.0% |
| 4970204 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 80.0 | 6.63e-01 | 95.0% | 68.3% |
| 3977266 | 2002.1.1.232 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 | 0.88 | 81.0 | 6.75e-01 | 95.0% | 71.8% |
| 5010295 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 81.0 | 6.87e-01 | 95.0% | 67.1% |
| 4458545 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 81.0 | 6.74e-01 | 95.0% | 61.4% |
| 3602602 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 78.0 | 6.35e-01 | 92.9% | 69.1% |
| 4549416 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 80.0 | 6.91e-01 | 95.0% | 69.1% |
| None | — | 0.88 | 80.0 | 6.79e-01 | 94.3% | 69.0% | |
| 4939708 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 80.0 | 6.41e-01 | 94.3% | 66.5% |
| 2440205 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.88 | 84.0 | 6.95e-01 | 100.0% | 75.1% |
| 4156735 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 82.0 | 6.84e-01 | 97.1% | 66.2% |
| 4554434 | 2002.1.1.232 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 | 0.87 | 82.0 | 6.80e-01 | 97.9% | 64.4% |
| 4449629 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.87 | 80.0 | 6.77e-01 | 95.0% | 70.5% |
| 5047699 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.87 | 78.0 | 6.42e-01 | 93.6% | 67.8% |
| 3838534 | 2002.1.1.232 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 | 0.86 | 78.0 | 6.33e-01 | 95.0% | 71.8% |
| 4612866 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.86 | 79.0 | 6.65e-01 | 95.0% | 70.2% |
| 5048704 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 76.0 | 6.00e-01 | 93.6% | 60.4% |
| 3165412 | 2002.1.1.232 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 | 0.85 | 77.0 | 6.18e-01 | 95.7% | 71.4% |
| 4995757 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 76.0 | 6.33e-01 | 93.6% | 63.4% |
| 5058430 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.83 | 75.0 | 5.56e-01 | 94.3% | 50.0% |
| 5023992 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.82 | 74.0 | 5.54e-01 | 95.0% | 59.7% |
| 4995751 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.80 | 65.0 | 4.87e-01 | 84.3% | 50.0% |
| 4985659 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 71.0 | 5.84e-01 | 93.6% | 63.8% |
| 4972142 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.76 | 67.0 | 5.63e-01 | 92.9% | 66.7% |
| 3954200 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.74 | 62.0 | 4.98e-01 | 87.9% | 56.9% |
| 4948322 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 52.0 | 4.25e-01 | 80.7% | 43.6% |
| 3600747 | 2003.1.4.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain | 0.69 | 48.0 | 4.15e-01 | 71.4% | 88.4% |
| 4946013 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.66 | 46.0 | 3.93e-01 | 70.7% | 88.1% |
| 4936585 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.66 | 45.0 | 3.72e-01 | 70.7% | 92.5% |
| 4455274 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.65 | 45.0 | 3.87e-01 | 70.0% | 90.2% |
| 4946796 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.63 | 45.0 | 3.66e-01 | 72.1% | 89.4% |
| 4303450 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.61 | 43.0 | 3.82e-01 | 72.9% | 93.2% |
| 4024079 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.60 | 48.0 | 3.84e-01 | 85.0% | 91.9% |
| 5055472 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.59 | 46.0 | 4.04e-01 | 80.7% | 87.5% |
| 4662471 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.59 | 37.0 | 3.82e-01 | 75.7% | 64.4% |
| 3970864 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.59 | 49.0 | 4.48e-01 | 90.7% | 94.2% |
| 3212023 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.58 | 44.0 | 3.57e-01 | 80.7% | 96.0% |
| 4231124 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.57 | 48.0 | 3.61e-01 | 92.1% | 97.4% |
| 4259946 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.56 | 42.0 | 3.55e-01 | 79.3% | 100.0% |
| 3957556 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.50 | 23.0 | 2.69e-01 | 70.0% | 57.0% |
D2
medium
residues 141-219
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hjxA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 57.0 | 3.92e-01 | 100.0% | 38.8% |
| 1hyeA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 48.0 | 3.96e-01 | 93.7% | 44.2% |
| 4lusA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.63 | 54.0 | 4.04e-01 | 100.0% | 47.0% |
| 3fdjA01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.60 | 50.0 | 4.55e-01 | 93.7% | 67.9% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 53.0 | 4.25e-01 | 100.0% | 96.8% |
| 1vc1A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.60 | 49.0 | 4.45e-01 | 92.4% | 82.7% |
| 3aapA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 47.0 | 4.15e-01 | 89.9% | 85.6% |
| 6p4xA03 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.58 | 47.0 | 3.28e-01 | 91.1% | 85.9% |
| 7ylrA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.58 | 42.0 | 3.84e-01 | 100.0% | 56.4% |
| 5agaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 49.0 | 3.71e-01 | 97.5% | 61.4% |
| 2jh3A02 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 50.0 | 4.37e-01 | 100.0% | 80.5% |
| 2hoeA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 47.0 | 3.92e-01 | 92.4% | 96.6% |
| 4kqcA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 47.0 | 3.83e-01 | 93.7% | 50.0% |
| 3jr7A01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.57 | 49.0 | 4.37e-01 | 98.7% | 94.9% |
| 2g7zA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 49.0 | 4.01e-01 | 100.0% | 96.1% |
| 2vgnA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.56 | 48.0 | 4.21e-01 | 100.0% | 92.1% |
| 6yubA02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.56 | 48.0 | 4.32e-01 | 100.0% | 82.6% |
| 5cxxB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 49.0 | 3.41e-01 | 100.0% | 74.8% |
| 1udxA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 48.0 | 3.80e-01 | 100.0% | 86.8% |
| 1wv9A00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.55 | 44.0 | 4.30e-01 | 100.0% | 81.6% |
| 2q8pA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.55 | 48.0 | 3.76e-01 | 100.0% | 62.8% |
| 1ygpA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 46.0 | 3.11e-01 | 100.0% | 29.2% |
| 2x6rB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 39.0 | 2.97e-01 | 81.0% | 75.1% |
| 3lccA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 42.0 | 3.23e-01 | 96.2% | 37.0% |
| 7xhlE01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 44.0 | 3.55e-01 | 98.7% | 99.4% |
| 7e52A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 44.0 | 3.86e-01 | 100.0% | 64.1% |
| 3vu9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 44.0 | 3.34e-01 | 100.0% | 50.2% |
| 1yh0A02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.51 | 41.0 | 3.25e-01 | 91.1% | 71.3% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3182342 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.64 | 56.0 | 3.88e-01 | 100.0% | 67.4% |
| 3175080 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.63 | 54.0 | 4.55e-01 | 98.7% | 78.6% |
| 2645887 | 7510.1.1.0 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like | 0.62 | 50.0 | 4.13e-01 | 88.6% | 76.4% |
| 3399196 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 52.0 | 4.04e-01 | 100.0% | 53.3% |
| 5052545 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 53.0 | 3.68e-01 | 100.0% | 47.1% |
| 3385733 | 2007.1.14.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Ferrochelatase | 0.61 | 51.0 | 4.15e-01 | 94.9% | 98.1% |
| 5069733 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.60 | 52.0 | 3.61e-01 | 100.0% | 76.3% |
| 3690972 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.60 | 48.0 | 3.55e-01 | 91.1% | 76.1% |
| 3724276 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.60 | 49.0 | 3.56e-01 | 93.7% | 70.2% |
| 3456443 | 2003.1.5.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 | 0.60 | 49.0 | 3.31e-01 | 91.1% | 35.1% |
| 4018678 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.59 | 52.0 | 3.41e-01 | 100.0% | 43.9% |
| 3476281 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.59 | 48.0 | 4.10e-01 | 93.7% | 54.6% |
| 3398696 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.59 | 42.0 | 3.10e-01 | 93.7% | 27.4% |
| 4968452 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.59 | 51.0 | 3.33e-01 | 100.0% | 38.2% |
| 3961091 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 49.0 | 4.30e-01 | 93.7% | 92.5% |
| 3734566 | 2484.1.1.176 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 | 0.58 | 48.0 | 2.97e-01 | 93.7% | 51.5% |
| 5021191 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.58 | 47.0 | 3.95e-01 | 93.7% | 50.7% |
| 4394721 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.58 | 49.0 | 3.82e-01 | 100.0% | 66.8% |
| 1756874 | 2004.1.1.542 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5, AAA_7 | 0.56 | 48.0 | 3.81e-01 | 100.0% | 69.1% |
| 3691341 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.56 | 46.0 | 3.50e-01 | 96.2% | 54.9% |
| 3690079 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 47.0 | 3.25e-01 | 100.0% | 58.5% |
| 3245213 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 44.0 | 4.07e-01 | 93.7% | 67.3% |
| 3735958 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.55 | 46.0 | 2.63e-01 | 93.7% | 12.1% |
| 5019587 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 45.0 | 3.61e-01 | 94.9% | 44.4% |
| 3414530 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.55 | 46.0 | 3.23e-01 | 94.9% | 92.1% |
| 3056321 | 7514.1.1.4 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › DmmA-like_N | 0.55 | 40.0 | 3.57e-01 | 100.0% | 52.9% |
| 4032754 | 3979.1.1.0 ↗ | a+b four layers › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain | 0.54 | 43.0 | 4.33e-01 | 89.9% | 92.5% |
| 3262207 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.54 | 44.0 | 3.31e-01 | 94.9% | 34.1% |
| 3333970 | 2484.1.1.176 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 | 0.54 | 46.0 | 2.88e-01 | 100.0% | 36.0% |
| 3356738 | 2484.1.1.42 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_2 | 0.54 | 44.0 | 3.74e-01 | 93.7% | 57.9% |
| 3702608 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.54 | 47.0 | 3.49e-01 | 100.0% | 37.9% |
| 4118402 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.54 | 44.0 | 2.98e-01 | 100.0% | 21.8% |
| 3706682 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.53 | 46.0 | 2.93e-01 | 100.0% | 18.4% |
| 3688164 | 2004.1.1.435 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_ATPase | 0.53 | 45.0 | 3.10e-01 | 98.7% | 59.0% |
| 3224330 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 46.0 | 3.86e-01 | 100.0% | 64.3% |
| 4032870 | 2484.1.1.8 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK | 0.52 | 44.0 | 3.59e-01 | 100.0% | 93.3% |
| 4588479 | 2495.1.1.0 ↗ | a/b three-layered sandwiches › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain | 0.52 | 44.0 | 4.42e-01 | 100.0% | 96.2% |
| 4194570 | 7519.1.1.1 ↗ | a/b three-layered sandwiches › ATP synthase (F1-ATPase), gamma subunit › ATP synthase (F1-ATPase), gamma subunit › ATP synthase (F1-ATPase), gamma subunit › ATP-synt | 0.51 | 44.0 | 2.92e-01 | 94.9% | 24.8% |
| 3723910 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.51 | 42.0 | 2.99e-01 | 93.7% | 60.4% |
| 4243603 | 7519.1.1.1 ↗ | a/b three-layered sandwiches › ATP synthase (F1-ATPase), gamma subunit › ATP synthase (F1-ATPase), gamma subunit › ATP synthase (F1-ATPase), gamma subunit › ATP-synt | 0.51 | 44.0 | 2.97e-01 | 98.7% | 32.2% |
| 3550777 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.51 | 38.0 | 2.59e-01 | 87.3% | 18.9% |
| 3925706 | 2004.1.1.93 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy | 0.51 | 42.0 | 3.76e-01 | 98.7% | 68.8% |
| 3983052 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.51 | 43.0 | 3.13e-01 | 100.0% | 33.6% |
| 4957189 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.50 | 42.0 | 2.68e-01 | 97.5% | 30.0% |