←Back to structures
IMGVR_UViG_3300028568_000046-3300028568-Ga0255345_100206345
Arc-VirIMGVR_UViG_3300028568_000046-3300028568-Ga0255345_100206345
Identity
- Kingdom:
- archaea
Quality
86.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-84
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 42.0 | 5.15e-01 | 72.8% | 98.0% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 43.0 | 4.67e-01 | 81.5% | 76.9% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 42.0 | 4.74e-01 | 82.7% | 83.9% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 41.0 | 4.80e-01 | 75.3% | 96.2% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 46.0 | 5.18e-01 | 87.7% | 100.0% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.65 | 38.0 | 3.40e-01 | 74.1% | 43.1% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 45.0 | 4.71e-01 | 82.7% | 81.9% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.63 | 37.0 | 3.44e-01 | 75.3% | 45.7% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 37.0 | 3.92e-01 | 84.0% | 68.1% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 44.0 | 4.56e-01 | 96.3% | 80.3% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.60 | 42.0 | 4.35e-01 | 97.5% | 77.9% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 38.0 | 3.65e-01 | 97.5% | 54.2% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 39.0 | 4.38e-01 | 76.5% | 88.7% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 37.0 | 4.17e-01 | 72.8% | 83.6% |
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.58 | 36.0 | 4.06e-01 | 92.6% | 83.6% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.57 | 45.0 | 3.75e-01 | 86.4% | 62.8% |
| 1deuB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 50.0 | 3.52e-01 | 98.8% | 90.8% |
| 3pieC09 | 2.30.30.750 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 48.0 | 4.50e-01 | 92.6% | 91.9% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 38.0 | 4.18e-01 | 97.5% | 90.5% |
| 5fpwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 49.0 | 3.37e-01 | 98.8% | 76.7% |
| 2mk5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 48.0 | 4.13e-01 | 96.3% | 73.3% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.56 | 37.0 | 4.01e-01 | 97.5% | 83.6% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.56 | 39.0 | 3.61e-01 | 84.0% | 56.7% |
| 1xkgA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 48.0 | 3.32e-01 | 98.8% | 69.5% |
| 1m9sA04 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 45.0 | 4.45e-01 | 88.9% | 90.7% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 35.0 | 3.90e-01 | 97.5% | 91.2% |
| 1r77A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 47.0 | 4.42e-01 | 97.5% | 93.9% |
| 4kc7A02 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 38.0 | 3.64e-01 | 75.3% | 89.9% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.53 | 37.0 | 3.37e-01 | 84.0% | 53.2% |
| 1sp4B00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 44.0 | 3.32e-01 | 97.5% | 42.0% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 42.0 | 3.75e-01 | 100.0% | 63.7% |
| 5bukB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 41.0 | 2.73e-01 | 97.5% | 57.3% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004050 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 43.0 | 4.59e-01 | 82.7% | 67.1% |
| 4481026 | 4.1.1.407 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29661 | 0.72 | 46.0 | 5.26e-01 | 88.9% | 88.3% |
| 4026958 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 44.0 | 5.13e-01 | 97.5% | 94.5% |
| 5032809 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.68 | 44.0 | 3.77e-01 | 82.7% | 41.5% |
| 3702154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 45.0 | 4.73e-01 | 98.8% | 76.0% |
| 3879653 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.67 | 44.0 | 4.70e-01 | 82.7% | 78.6% |
| 3847592 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 44.0 | 2.70e-01 | 96.3% | 12.0% |
| 3905549 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 42.0 | 3.87e-01 | 82.7% | 51.4% |
| 3766659 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.64 | 41.0 | 4.66e-01 | 84.0% | 88.3% |
| 2126408 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.64 | 42.0 | 4.26e-01 | 84.0% | 66.7% |
| 5066224 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.64 | 42.0 | 4.08e-01 | 82.7% | 60.0% |
| 154312 | 4.1.1.65 ↗ | beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor | 0.64 | 40.0 | 4.29e-01 | 84.0% | 72.9% |
| 4411726 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.64 | 49.0 | 5.36e-01 | 100.0% | 100.0% |
| 3387119 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.64 | 43.0 | 4.19e-01 | 82.7% | 62.2% |
| 4010681 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.64 | 43.0 | 4.10e-01 | 82.7% | 58.9% |
| 4937389 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.64 | 42.0 | 3.78e-01 | 82.7% | 49.1% |
| 4565837 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.64 | 42.0 | 4.03e-01 | 82.7% | 57.9% |
| 2727964 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.64 | 43.0 | 4.89e-01 | 86.4% | 96.6% |
| 3855038 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.63 | 46.0 | 3.64e-01 | 88.9% | 38.1% |
| 4029093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 41.0 | 3.30e-01 | 97.5% | 34.2% |
| 3409299 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.63 | 40.0 | 4.03e-01 | 82.7% | 63.7% |
| 3917568 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 40.0 | 3.60e-01 | 84.0% | 45.2% |
| 4161673 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.63 | 43.0 | 4.26e-01 | 85.2% | 67.1% |
| 3570368 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 41.0 | 3.85e-01 | 82.7% | 54.0% |
| 4523548 | 4.8.1.35 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 | 0.63 | 49.0 | 4.83e-01 | 85.2% | 78.8% |
| 4956630 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.63 | 42.0 | 3.40e-01 | 82.7% | 36.1% |
| 3281271 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.62 | 42.0 | 4.14e-01 | 82.7% | 63.3% |
| 3286662 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.62 | 44.0 | 4.08e-01 | 82.7% | 59.0% |
| 3589934 | 219.1.1.34 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C47 | 0.62 | 51.0 | 4.01e-01 | 90.1% | 96.4% |
| 3656401 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 41.0 | 4.24e-01 | 97.5% | 73.3% |
| 4422252 | 4.1.1.455 ↗ | beta barrels › SH3 › SH3 › SH3 › DSRB | 0.62 | 42.0 | 4.71e-01 | 85.2% | 96.7% |
| 4167784 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.62 | 47.0 | 4.97e-01 | 98.8% | 92.9% |
| 3416068 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.61 | 41.0 | 3.33e-01 | 84.0% | 36.1% |
| 3947700 | 4.8.1.25 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DSRB | 0.61 | 42.0 | 4.59e-01 | 85.2% | 92.1% |
| 3917372 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.61 | 43.0 | 4.52e-01 | 82.7% | 81.3% |
| 3730229 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.61 | 40.0 | 4.18e-01 | 82.7% | 73.3% |
| 3289944 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.61 | 43.0 | 4.18e-01 | 82.7% | 66.7% |
| 4565130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 41.0 | 3.90e-01 | 96.3% | 60.0% |
| 3440094 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.60 | 38.0 | 4.29e-01 | 97.5% | 86.7% |
| 4118552 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.60 | 42.0 | 4.37e-01 | 96.3% | 80.0% |
| 632 | 4.7.1.2 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF | 0.60 | 42.0 | 4.15e-01 | 96.3% | 69.8% |
| 5032454 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.59 | 44.0 | 3.73e-01 | 84.0% | 48.5% |
| 4033073 | 4.1.1.86 ↗ | beta barrels › SH3 › SH3 › SH3 › GW | 0.59 | 48.0 | 4.96e-01 | 87.7% | 97.3% |
| 4682138 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 48.0 | 4.94e-01 | 87.7% | 97.3% |
| 4936914 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.59 | 41.0 | 3.77e-01 | 82.7% | 56.2% |
| 3520654 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.58 | 38.0 | 3.15e-01 | 98.8% | 35.3% |
| 3715285 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.58 | 42.0 | 3.42e-01 | 82.7% | 40.6% |
| 4300895 | 4.11.1.6 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 | 0.58 | 43.0 | 3.57e-01 | 82.7% | 45.7% |
| 3661142 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.57 | 50.0 | 3.96e-01 | 97.5% | 61.8% |
| 3401387 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.56 | 49.0 | 3.81e-01 | 97.5% | 55.6% |
| 3612749 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.56 | 49.0 | 3.29e-01 | 97.5% | 39.1% |
| 1293364 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.56 | 48.0 | 4.13e-01 | 96.3% | 73.3% |
| 536 | 4.1.1.86 ↗ | beta barrels › SH3 › SH3 › SH3 › GW | 0.55 | 45.0 | 4.45e-01 | 88.9% | 90.7% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.54 | 43.0 | 4.27e-01 | 97.5% | 82.4% |
| 3730011 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.53 | 40.0 | 3.37e-01 | 97.5% | 46.4% |
| 4168737 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 37.0 | 3.88e-01 | 97.5% | 81.1% |
| 4486690 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.53 | 43.0 | 2.87e-01 | 90.1% | 93.7% |
| 3218349 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 39.0 | 3.76e-01 | 80.2% | 82.1% |
| 4932404 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.52 | 44.0 | 3.54e-01 | 92.6% | 57.5% |
| 4051617 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.52 | 35.0 | 3.03e-01 | 96.3% | 44.0% |
| 4209798 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.52 | 40.0 | 3.99e-01 | 84.0% | 80.0% |
| 4629022 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.52 | 37.0 | 3.99e-01 | 96.3% | 90.0% |
| 5068098 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.51 | 45.0 | 3.52e-01 | 97.5% | 60.0% |
| 4357819 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.51 | 38.0 | 4.10e-01 | 87.7% | 92.9% |
| 4947855 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 43.0 | 2.74e-01 | 96.3% | 72.3% |
| 3448896 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.50 | 33.0 | 3.24e-01 | 71.6% | 60.0% |
| 3602511 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 37.0 | 3.93e-01 | 96.3% | 90.0% |
| 1283866 | 220.1.1.51 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP3_C | 0.50 | 42.0 | 3.75e-01 | 100.0% | 63.7% |
| 4141828 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.50 | 38.0 | 4.00e-01 | 97.5% | 90.5% |