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IMGVR_UViG_3300028576_000077-3300028576-Ga0255340_100341046
Arc-VirIMGVR_UViG_3300028576_000077-3300028576-Ga0255340_100341046
Identity
- Kingdom:
- archaea
Quality
87.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 55-170
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4pk9A00 | 3.40.1090.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain | 0.87 | 81.0 | 5.58e-01 | 100.0% | 35.1% |
| 4akgA02 | 1.20.140.100 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain | 0.53 | 36.0 | 3.23e-01 | 70.7% | 85.1% |
| 3m21F00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.51 | 24.0 | 3.16e-01 | 76.7% | 79.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4317829 | 2007.1.19.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin | 0.83 | 78.0 | 5.44e-01 | 100.0% | 35.4% |
| 3334721 | 2007.1.19.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin | 0.80 | 75.0 | 5.07e-01 | 100.0% | 34.8% |
| 3656285 | 2007.1.19.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin | 0.79 | 68.0 | 4.80e-01 | 100.0% | 32.3% |
| 3236859 | 2007.1.19.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin | 0.75 | 70.0 | 4.84e-01 | 100.0% | 40.3% |
| 4029038 | 2007.1.19.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin | 0.74 | 67.0 | 4.72e-01 | 100.0% | 33.3% |
| 3237917 | 2007.1.19.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin | 0.70 | 64.0 | 4.57e-01 | 100.0% | 37.9% |
| 4488757 | 7522.1.1.1 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › Transketolase_C | 0.57 | 36.0 | 3.43e-01 | 97.4% | 52.1% |
| 3690560 | 2008.1.1.150 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7102 | 0.57 | 40.0 | 3.44e-01 | 94.0% | 43.7% |
| 2488644 | 2005.1.1.15 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase | 0.56 | 35.0 | 3.54e-01 | 86.2% | 59.5% |
| 4385639 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.53 | 40.0 | 3.63e-01 | 94.8% | 58.2% |
| 4110108 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.53 | 42.0 | 3.84e-01 | 96.6% | 63.9% |
| 2756424 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.53 | 38.0 | 3.41e-01 | 95.7% | 54.4% |
| 3183429 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 43.0 | 3.33e-01 | 94.0% | 67.8% |
| 4128223 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.50 | 40.0 | 3.65e-01 | 93.1% | 64.7% |
D2
medium
residues 1-54
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7l9pK01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.56 | 32.0 | 2.49e-01 | 85.2% | 26.1% |
| 2zxqA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 43.0 | 2.78e-01 | 92.6% | 21.3% |
| 1cl8A00 | 3.40.580.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RI Endonuclease; Chain A › Eco RI Endonuclease, subunit A | 0.52 | 40.0 | 2.62e-01 | 98.1% | 17.6% |
| 5umbA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 43.0 | 3.07e-01 | 98.1% | 39.2% |
| 1flcB00 | 3.90.20.10 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › | 0.52 | 35.0 | 2.52e-01 | 90.7% | 23.5% |
| 7qqfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 39.0 | 2.52e-01 | 94.4% | 66.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3313784 | 2007.1.19.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin | 0.84 | 76.0 | 4.83e-01 | 100.0% | 50.0% |
| 3181277 | 2007.1.19.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin | 0.81 | 71.0 | 4.65e-01 | 100.0% | 23.6% |
| 4446502 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.59 | 45.0 | 3.24e-01 | 85.2% | 67.3% |
| 3482807 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.57 | 39.0 | 3.25e-01 | 85.2% | 37.0% |
| 4031851 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.56 | 43.0 | 3.17e-01 | 87.0% | 79.4% |
| 4129336 | 3675.1.1.0 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain | 0.55 | 45.0 | 3.43e-01 | 98.1% | 69.3% |
| 3287378 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.55 | 38.0 | 2.44e-01 | 70.4% | 62.3% |
| 4579329 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.55 | 44.0 | 3.22e-01 | 92.6% | 81.0% |
| 2619966 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.53 | 37.0 | 2.86e-01 | 74.1% | 46.6% |
| 3307718 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.53 | 43.0 | 3.47e-01 | 98.1% | 60.0% |
| 3450312 | 7581.1.1.6 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C | 0.52 | 44.0 | 3.11e-01 | 96.3% | 70.6% |
| 2156991 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 35.0 | 2.18e-01 | 70.4% | 17.2% |
| 3398485 | 3939.1.1.16 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › Ax_dynein_light | 0.50 | 38.0 | 2.72e-01 | 87.0% | 44.3% |
| 4210625 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.50 | 39.0 | 2.38e-01 | 100.0% | 55.4% |