←Back to structures

IMGVR_UViG_3300028591_000123-3300028591-Ga0247611_10000245104

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300028591_000123-3300028591-Ga0247611_10000245104 ↗
Kingdom:: archaea

Quality

70.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-67

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1k32A03	3.30.750.44	Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA ›	0.66	43.0	4.18e-01	70.3%	59.7%
3eslA02	1.25.40.930	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.65	49.0	4.04e-01	84.4%	43.7%
3sfvB02	6.10.140.2010	Special › Helix non-globular › Helix Hairpins ›	0.65	48.0	3.47e-01	81.2%	94.5%
1txuA01	1.10.246.120	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 ›	0.65	51.0	4.60e-01	89.1%	75.5%
2a3vB01	1.10.150.130	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain	0.64	46.0	4.04e-01	75.0%	51.1%
2f48A02	3.40.50.460	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphofructokinase domain	0.64	51.0	3.70e-01	100.0%	30.9%
5bmnA03	3.40.120.10	Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3	0.62	44.0	3.68e-01	76.6%	89.9%
3zilA00	1.25.10.60	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Rad61, Wapl domain	0.60	50.0	3.22e-01	100.0%	18.8%
3e48B02	3.90.25.10	Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1	0.53	38.0	3.27e-01	78.1%	94.3%
3fajA00	1.20.120.950	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062	0.52	43.0	3.78e-01	95.3%	88.1%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3734404	1128.1.1.1 ↗	alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR	0.77	52.0	4.85e-01	71.9%	56.2%
3538309	1128.1.1.1 ↗	alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR	0.76	52.0	4.83e-01	71.9%	56.2%
3392896	1128.1.1.1 ↗	alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR	0.74	50.0	4.57e-01	70.3%	54.1%
3597591	1128.1.1.0 ↗	alpha bundles › LYR protein › LYR protein › LYR protein	0.72	50.0	4.87e-01	76.6%	65.7%
3250261	1128.1.1.1 ↗	alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR	0.72	50.0	4.44e-01	71.9%	51.1%
5010597	5058.1.1.99 ↗	alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › DUF373	0.70	52.0	4.06e-01	79.7%	42.9%
3657184	1128.1.1.0 ↗	alpha bundles › LYR protein › LYR protein › LYR protein	0.67	46.0	3.86e-01	71.9%	42.7%
3786602	1128.1.1.1 ↗	alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR	0.64	46.0	4.05e-01	75.0%	51.6%
3519972	192.5.1.14 ↗	alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA	0.63	45.0	4.02e-01	75.0%	56.7%
3317357	109.4.1.420 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR	0.59	49.0	3.42e-01	96.9%	40.9%
5040242	186.1.1.0 ↗	alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N	0.59	44.0	3.89e-01	85.9%	95.2%
5081699	186.1.1.4 ↗	alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4	0.56	46.0	4.12e-01	90.6%	71.1%
4931760	3355.1.1.41 ↗	alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › DUF401	0.56	45.0	2.80e-01	89.1%	77.5%