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IMGVR_UViG_3300028591_000123-3300028591-Ga0247611_1000024562
Arc-VirIMGVR_UViG_3300028591_000123-3300028591-Ga0247611_1000024562
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 118-216
Domain cluster:
rep: IMGVR_UViG_2684622743_000001-2684622743-2685523771__D41-153
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.54 | 31.0 | 3.60e-01 | 99.0% | 85.7% |
| 4z5qA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 43.0 | 3.00e-01 | 91.9% | 87.1% |
| 4obmA00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.52 | 43.0 | 3.25e-01 | 92.9% | 77.5% |
| 4hpqA00 | 1.10.10.2570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 31.0 | 3.59e-01 | 100.0% | 85.5% |
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 32.0 | 3.41e-01 | 71.7% | 72.1% |
| 1orqC01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 36.0 | 2.85e-01 | 74.7% | 83.5% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957561 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.71 | 63.0 | 6.16e-01 | 100.0% | 88.6% |
| 3690769 | 109.4.1.2205 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SF3b1, HEAT_EZ, PPP2R1A-like_HEAT | 0.67 | 47.0 | 2.70e-01 | 72.7% | 10.2% |
| 3214850 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.58 | 40.0 | 2.80e-01 | 72.7% | 78.0% |
| 2392275 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 42.0 | 2.94e-01 | 77.8% | 96.0% |
| 3925392 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.55 | 30.0 | 3.28e-01 | 85.9% | 63.7% |
| 3257563 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.54 | 33.0 | 3.43e-01 | 100.0% | 63.2% |
| 4050509 | 4096.1.1.1 ↗ | a+b two layers › NAP-like › NAP-like › NAP-like › NAP | 0.51 | 36.0 | 2.61e-01 | 72.7% | 46.5% |
| 3501429 | 109.4.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U3snoRNP10 | 0.51 | 38.0 | 2.73e-01 | 80.8% | 40.7% |