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IMGVR_UViG_3300028601_000032-3300028601-Ga0265295_100060072
Arc-VirIMGVR_UViG_3300028601_000032-3300028601-Ga0265295_100060072
Identity
- Kingdom:
- archaea
Quality
73.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-75
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01316.28 best | Arg_repressor | 28.9 | 1.10e-06 | 100.0% | 45.7% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2np2A00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.84 | 63.0 | 4.83e-01 | 82.2% | 37.3% |
| 5ui5I04 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.83 | 65.0 | 5.75e-01 | 84.4% | 61.9% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 62.0 | 4.71e-01 | 91.1% | 36.6% |
| 2h92A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 59.0 | 3.83e-01 | 100.0% | 81.9% |
| 3e3rB01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.66 | 54.0 | 4.41e-01 | 91.1% | 72.9% |
| 5h0pA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.64 | 50.0 | 3.90e-01 | 86.7% | 53.9% |
| 4i9fB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.64 | 56.0 | 3.92e-01 | 100.0% | 64.2% |
| 3d0wA00 | 1.10.760.20 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Protein of unknown function DUF3243 | 0.64 | 45.0 | 3.71e-01 | 75.6% | 40.7% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 46.0 | 4.03e-01 | 91.1% | 49.3% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 51.0 | 4.58e-01 | 100.0% | 87.1% |
| 2ew2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 47.0 | 3.58e-01 | 100.0% | 50.0% |
| 3it4B01 | 3.30.2330.10 | Alpha Beta › 2-Layer Sandwich › arginine biosynthesis bifunctional protein fold › arginine biosynthesis bifunctional protein suprefamily | 0.59 | 51.0 | 4.27e-01 | 97.8% | 89.9% |
| 3tw6B03 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 45.0 | 2.60e-01 | 91.1% | 18.2% |
| 2xb4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 47.0 | 3.06e-01 | 91.1% | 81.6% |
| 16vpA00 | 1.10.1290.10 | Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) | 0.58 | 49.0 | 2.97e-01 | 97.8% | 62.7% |
| 3u9rB02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 42.0 | 2.69e-01 | 100.0% | 14.4% |
| 3zfvA02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 3.19e-01 | 93.3% | 65.4% |
| 3a1kA01 | 1.10.20.60 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Glu-tRNAGln amidotransferase C subunit, N-terminal domain | 0.53 | 39.0 | 3.84e-01 | 91.1% | 75.9% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928271 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.94 | 69.0 | 7.33e-01 | 77.8% | 90.0% |
| 4945040 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.94 | 77.0 | 6.88e-01 | 86.7% | 66.7% |
| 4946654 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.93 | 76.0 | 6.81e-01 | 86.7% | 66.7% |
| 4944585 | 101.1.2.872 ↗ | alpha arrays › HTH › HTH › winged helix domain › rve | 0.93 | 75.0 | 6.73e-01 | 86.7% | 66.7% |
| 4927804 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.91 | 83.0 | 6.88e-01 | 100.0% | 61.3% |
| 3353701 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.90 | 80.0 | 6.11e-01 | 100.0% | 56.0% |
| 3987150 | 101.1.1.382 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66 | 0.89 | 73.0 | 7.03e-01 | 88.9% | 82.0% |
| 3590474 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 80.0 | 6.40e-01 | 100.0% | 55.3% |
| 5074546 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.88 | 72.0 | 5.82e-01 | 91.1% | 50.6% |
| 3934874 | 101.1.1.396 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Arg_repressor | 0.87 | 69.0 | 6.46e-01 | 86.7% | 74.5% |
| 4929129 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 73.0 | 6.62e-01 | 93.3% | 73.3% |
| 3941666 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.86 | 77.0 | 6.43e-01 | 97.8% | 59.5% |
| 4008778 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 70.0 | 6.44e-01 | 86.7% | 72.7% |
| 3984597 | 101.1.2.488 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDE_Tnp_IS66 | 0.85 | 75.0 | 5.96e-01 | 100.0% | 51.1% |
| 4938633 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 67.0 | 4.64e-01 | 91.1% | 28.1% |
| 3946360 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 77.0 | 6.70e-01 | 100.0% | 72.3% |
| 3988910 | 101.1.1.382 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66 | 0.84 | 65.0 | 6.59e-01 | 86.7% | 88.9% |
| 3293055 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.84 | 73.0 | 6.49e-01 | 100.0% | 78.5% |
| 3590551 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.84 | 65.0 | 6.29e-01 | 84.4% | 80.0% |
| 5044657 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 71.0 | 6.39e-01 | 93.3% | 71.7% |
| 4975263 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.83 | 68.0 | 5.48e-01 | 91.1% | 51.8% |
| 4979742 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 68.0 | 5.63e-01 | 93.3% | 55.0% |
| 3981939 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.82 | 63.0 | 5.92e-01 | 84.4% | 74.5% |
| 3983493 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.81 | 63.0 | 6.09e-01 | 84.4% | 82.0% |
| 3456283 | 101.1.10.21 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C | 0.81 | 70.0 | 4.25e-01 | 97.8% | 18.9% |
| 5079733 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 64.0 | 5.45e-01 | 91.1% | 53.3% |
| 4263795 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.80 | 66.0 | 5.55e-01 | 91.1% | 65.3% |
| 4964446 | 101.1.2.233 ↗ | alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH | 0.80 | 65.0 | 5.28e-01 | 91.1% | 54.1% |
| 4988081 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 65.0 | 5.62e-01 | 91.1% | 64.3% |
| 3334681 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.78 | 60.0 | 6.05e-01 | 86.7% | 86.7% |
| 4928356 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 62.0 | 5.54e-01 | 91.1% | 70.8% |
| 5044210 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 64.0 | 5.66e-01 | 100.0% | 74.3% |
| 4256283 | 5051.1.1.12 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Trp_Tyr_perm | 0.73 | 55.0 | 3.24e-01 | 84.4% | 30.7% |
| 3737539 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.67 | 51.0 | 4.43e-01 | 91.1% | 61.3% |
| 4934210 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.62 | 54.0 | 3.30e-01 | 100.0% | 77.4% |
| 3619546 | 3712.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 | 0.61 | 49.0 | 4.40e-01 | 91.1% | 63.1% |