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IMGVR_UViG_3300028602_000031-3300028602-Ga0265294_1000081862
Arc-VirIMGVR_UViG_3300028602_000031-3300028602-Ga0265294_1000081862
Identity
- Kingdom:
- archaea
Quality
58.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-96
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4uhiA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 44.0 | 2.81e-01 | 96.4% | 83.9% |
| 1s5jA03 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.51 | 43.0 | 3.58e-01 | 96.4% | 57.3% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.51 | 41.0 | 3.08e-01 | 94.0% | 71.2% |
| 2qv6B02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.50 | 34.0 | 3.07e-01 | 71.1% | 92.6% |
| 3pcoB04 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.50 | 29.0 | 3.05e-01 | 81.9% | 62.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937431 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 42.0 | 3.42e-01 | 71.1% | 56.4% |
| 5041715 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.59 | 40.0 | 3.67e-01 | 71.1% | 52.7% |
| 5037669 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.57 | 50.0 | 3.43e-01 | 100.0% | 87.0% |
| 4004116 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.55 | 34.0 | 3.22e-01 | 79.5% | 50.0% |
| 3858618 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 32.0 | 3.29e-01 | 78.3% | 60.0% |
| 4944823 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 30.0 | 3.28e-01 | 85.5% | 67.1% |
| 3409348 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.52 | 32.0 | 3.29e-01 | 79.5% | 62.5% |
| 3627712 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.51 | 45.0 | 2.76e-01 | 100.0% | 56.4% |
| 5009323 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.51 | 30.0 | 2.45e-01 | 88.0% | 31.2% |
| 3516325 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 28.0 | 2.93e-01 | 78.3% | 55.0% |
D2
medium
residues 101-152
D3
medium
residues 153-224