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IMGVR_UViG_3300028602_000031-3300028602-Ga0265294_1000081872

Arc-Vir

IMGVR_UViG_3300028602_000031-3300028602-Ga0265294_1000081872

Identity

Kingdom:
archaea

Quality

85.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-59
PDB
Domain cluster: representative
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4il7A00 2.60.120.1300 Mainly Beta › Sandwich › Jelly Rolls › 0.73 49.0 4.35e-01 91.5% 48.2%
1zvfB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.72 49.0 3.57e-01 89.8% 25.6%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.66 54.0 4.03e-01 94.9% 67.7%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.64 44.0 3.58e-01 88.1% 36.4%
4ksnA00 6.20.250.80 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.64 50.0 4.91e-01 88.1% 90.8%
6mv2A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 49.0 4.10e-01 84.7% 69.5%
3e0jB00 3.90.1030.20 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 0.62 43.0 3.30e-01 89.8% 30.8%
1n26A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 49.0 4.12e-01 89.8% 49.5%
2v5yA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 46.0 3.96e-01 88.1% 49.0%
2ebfX01 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.61 52.0 3.71e-01 100.0% 55.4%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.60 48.0 4.51e-01 89.8% 76.3%
1fm2B03 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.60 42.0 4.10e-01 72.9% 69.7%
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.60 45.0 4.67e-01 89.8% 92.5%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.60 47.0 4.41e-01 89.8% 76.3%
2jqjA01 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.59 51.0 3.98e-01 98.3% 87.7%
4wksC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.59 42.0 3.88e-01 74.6% 64.0%
6l9iA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 39.0 2.85e-01 86.4% 22.8%
2dbjA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 43.0 3.58e-01 89.8% 44.0%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 45.0 3.78e-01 86.4% 69.5%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.57 44.0 3.59e-01 86.4% 57.1%
4yfbC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.57 40.0 3.66e-01 72.9% 61.5%
1yoaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 49.0 3.64e-01 100.0% 92.5%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.57 44.0 3.88e-01 89.8% 82.1%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.51e-01 83.1% 90.9%
6nvxB02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.56 38.0 3.56e-01 71.2% 62.3%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.56 44.0 4.10e-01 88.1% 76.6%
1w99A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 43.0 3.08e-01 86.4% 37.2%
4d8mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 43.0 3.25e-01 89.8% 37.6%
3d0jA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 43.0 3.37e-01 88.1% 58.0%
2ecuA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 47.0 3.61e-01 100.0% 91.3%
3waiA02 2.60.40.3390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 42.0 3.78e-01 89.8% 59.1%
2eddA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.28e-01 89.8% 41.1%
4emeC02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.55 43.0 3.41e-01 91.5% 72.6%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.54 42.0 3.73e-01 88.1% 56.5%
2pjyC00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.54 42.0 3.91e-01 89.8% 70.9%
3liuA01 2.60.40.3160 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 41.0 3.31e-01 83.1% 41.5%
4n0rA03 2.60.40.3950 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 41.0 3.44e-01 86.4% 50.0%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.54 40.0 3.59e-01 86.4% 58.5%
3db0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 43.0 3.38e-01 88.1% 42.7%
4qv2A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.53 41.0 3.42e-01 89.8% 54.2%
3r8jA00 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.53 44.0 3.23e-01 96.6% 60.0%
4rudA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.53 36.0 3.62e-01 93.2% 70.7%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 42.0 3.21e-01 88.1% 37.2%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 41.0 3.62e-01 91.5% 56.4%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 40.0 3.61e-01 89.8% 57.9%
1lb6A00 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.53 41.0 3.16e-01 91.5% 47.7%
6j0qA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.53 41.0 3.46e-01 89.8% 55.0%
4gzuA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.30e-01 96.6% 85.3%
3q39B02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.53 43.0 3.63e-01 96.6% 87.3%
1flkA00 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.53 40.0 2.90e-01 89.8% 34.6%
3lq6A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.52 43.0 3.58e-01 96.6% 88.6%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 38.0 2.73e-01 84.7% 32.3%
2qsdA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 40.0 3.94e-01 91.5% 82.1%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.51 40.0 3.52e-01 91.5% 56.2%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.51 40.0 3.06e-01 89.8% 40.8%
4geiA00 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 40.0 3.11e-01 89.8% 54.2%
7q61A01 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 3.30e-01 88.1% 56.9%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.51 40.0 2.86e-01 89.8% 28.1%
4bkwA03 3.30.500.40 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.50 36.0 2.96e-01 86.4% 38.1%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.50 39.0 3.23e-01 89.8% 46.7%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3979798 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.66 55.0 4.46e-01 91.5% 64.5%
4942818 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.66 53.0 4.06e-01 89.8% 45.7%
3794299 11.1.1.545 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Chromosome_seg 0.65 53.0 3.84e-01 93.2% 41.7%
4028543 929.1.1.0 ↗ beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.64 47.0 4.38e-01 88.1% 62.7%
3182884 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 45.0 3.16e-01 76.3% 87.5%
4944012 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.64 50.0 4.14e-01 88.1% 52.7%
5032784 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.63 46.0 4.01e-01 89.8% 49.5%
4967222 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.62 50.0 4.99e-01 89.8% 96.7%
2106285 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.61 49.0 4.08e-01 89.8% 53.7%
None — 0.61 50.0 3.69e-01 94.9% 45.0%
4607738 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.61 50.0 4.07e-01 89.8% 60.0%
4668960 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.04e-01 89.8% 59.1%
4527830 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 50.0 4.18e-01 93.2% 60.0%
4013514 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.61 49.0 4.07e-01 89.8% 55.2%
3518700 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.60 48.0 3.36e-01 89.8% 28.6%
4674170 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.60 49.0 3.89e-01 89.8% 55.0%
4063634 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.60 49.0 3.86e-01 89.8% 53.2%
4012607 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 48.0 3.81e-01 89.8% 49.6%
3619496 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 50.0 3.11e-01 100.0% 31.3%
3813872 5.1.4.550 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.59 46.0 3.02e-01 89.8% 98.3%
119269 2492.1.1.21 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › APOBEC2 0.59 46.0 3.33e-01 89.8% 65.1%
3885658 11.1.1.126 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL4Ra_N 0.59 46.0 4.03e-01 88.1% 57.9%
4400596 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.59 48.0 3.54e-01 89.8% 40.6%
2512518 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.59 47.0 4.01e-01 89.8% 57.4%
5013669 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 47.0 4.20e-01 89.8% 67.1%
4930890 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 46.0 4.27e-01 88.1% 69.3%
3314109 10.2.1.74 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › WAK 0.57 43.0 3.33e-01 88.1% 37.5%
3164640 5084.1.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TbpB_B_D 0.57 45.0 3.14e-01 91.5% 48.9%
4872941 10.2.1.43 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat_C 0.57 44.0 3.69e-01 91.5% 52.9%
3315951 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.56 44.0 4.07e-01 89.8% 100.0%
4329871 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.56 44.0 3.13e-01 89.8% 27.4%
4287739 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 40.0 3.03e-01 78.0% 46.3%
3784941 4004.1.1.1 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › YegS_C 0.56 44.0 2.96e-01 88.1% 96.2%
4501238 207.1.1.37 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID 0.56 45.0 3.16e-01 100.0% 58.8%
5034832 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 43.0 4.08e-01 84.7% 92.9%
3500186 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 43.0 3.62e-01 84.7% 57.0%
4944742 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 43.0 3.48e-01 89.8% 54.6%
3309702 207.1.1.43 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 0.55 46.0 2.72e-01 96.6% 26.7%
167211 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.55 40.0 3.30e-01 89.8% 41.8%
4081350 10.32.1.317 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Cry1Ac_D5, Cry1Ac_dom-VII 0.55 42.0 2.74e-01 93.2% 35.1%
3399926 382.1.1.6 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR 0.55 44.0 3.70e-01 96.6% 51.3%
4568169 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.54 47.0 4.13e-01 100.0% 94.4%
3263518 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 38.0 3.23e-01 76.3% 77.1%
3821082 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.54 43.0 3.71e-01 89.8% 56.8%
3531341 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.54 45.0 4.08e-01 93.2% 72.5%
3728819 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 38.0 2.78e-01 79.7% 80.5%
4963504 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 40.0 3.58e-01 91.5% 57.8%
3923950 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.52 42.0 3.60e-01 93.2% 67.0%
4936008 1.1.7.28 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.51 40.0 3.56e-01 91.5% 70.5%
3734418 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.51 41.0 2.67e-01 94.9% 67.9%
3222570 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 39.0 3.31e-01 89.8% 87.0%
3490350 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.51 41.0 4.05e-01 93.2% 95.4%
4321103 11.1.1.913 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29899 0.51 40.0 2.98e-01 96.6% 92.8%
1851176 5092.1.1.0 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins 0.50 40.0 3.21e-01 91.5% 42.6%
5038654 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 39.0 3.63e-01 89.8% 72.5%
3722905 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 39.0 2.89e-01 89.8% 58.9%
D2 medium residues 60-110
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7essA01 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.67 46.0 3.45e-01 72.5% 32.6%
5c6dA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.67 47.0 3.69e-01 72.5% 40.2%
3p2aA01 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.66 40.0 4.54e-01 92.2% 86.1%
5sviB00 3.30.40.100 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.61 48.0 4.75e-01 98.0% 83.0%
3hrgA01 3.30.420.250 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain 0.60 40.0 3.01e-01 70.6% 33.6%
4l8nA03 3.30.160.670 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 49.0 3.53e-01 100.0% 53.7%
7wq5A01 3.30.730.10 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › AP2/ERF domain 0.58 42.0 4.11e-01 78.4% 69.0%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.58 48.0 3.71e-01 100.0% 64.3%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.57 41.0 3.14e-01 80.4% 51.9%
2fggA01 3.30.160.240 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 0.57 45.0 4.12e-01 94.1% 69.3%
6p0cA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 45.0 3.31e-01 90.2% 68.7%
1neiA00 3.30.160.220 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG 0.57 46.0 4.49e-01 100.0% 90.0%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 41.0 3.58e-01 80.4% 88.0%
1wisA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 39.0 3.25e-01 76.5% 43.6%
3cxbA02 3.30.390.70 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Salmonella typhimurium protein 0.56 43.0 3.63e-01 96.1% 90.6%
1pgsA01 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.55 39.0 3.03e-01 80.4% 34.8%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.55 40.0 3.50e-01 88.2% 97.9%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 42.0 2.66e-01 94.1% 41.2%
1jyoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.55 43.0 3.41e-01 98.0% 65.4%
3dmgA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 43.0 3.03e-01 96.1% 51.0%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 43.0 2.70e-01 94.1% 96.7%
3g4eA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 41.0 2.67e-01 92.2% 44.8%
5dynA01 3.40.50.11970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 37.0 3.01e-01 72.5% 45.3%
3l4gB03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.54 38.0 3.44e-01 76.5% 95.9%
2yfsA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 42.0 2.53e-01 98.0% 18.8%
4mdaA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 40.0 2.87e-01 100.0% 24.5%
2w0tA00 3.30.60.160 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.53 33.0 3.51e-01 78.4% 74.4%
1wfqA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 41.0 3.68e-01 90.2% 68.5%
2hj1A00 3.10.20.280 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like 0.51 36.0 3.29e-01 80.4% 54.5%
6igbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 39.0 2.49e-01 94.1% 36.4%
4gnxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 38.0 3.05e-01 82.4% 94.4%
1xreA02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.51 40.0 3.30e-01 98.0% 67.9%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3738600 221.1.1.46 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg 0.72 51.0 3.79e-01 74.5% 37.6%
4057017 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.67 56.0 4.52e-01 100.0% 47.6%
3347090 221.1.1.159 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF7138 0.65 45.0 3.89e-01 74.5% 47.1%
4126633 386.1.1.75 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Rua1_C 0.63 44.0 4.05e-01 82.4% 54.2%
3984933 252.2.1.5 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 0.62 49.0 4.15e-01 90.2% 85.6%
None — 0.62 48.0 3.34e-01 100.0% 23.5%
3925690 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.62 43.0 3.95e-01 78.4% 60.0%
5052185 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 47.0 3.65e-01 90.2% 45.4%
4947810 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 46.0 3.71e-01 90.2% 47.5%
4608174 284.1.3.1 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 0.60 45.0 3.91e-01 86.3% 100.0%
3742275 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.60 44.0 3.29e-01 84.3% 30.7%
4929843 4123.1.1.0 ↗ few secondary structure elements › E7 C-terminal domain-like › E7 C-terminal domain-like › E7 C-terminal domain-like 0.59 46.0 4.67e-01 94.1% 94.0%
4062195 2004.1.1.159 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.58 46.0 3.08e-01 92.2% 23.0%
3779203 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 41.0 3.03e-01 80.4% 26.7%
4983870 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.57 46.0 3.92e-01 98.0% 58.9%
5079725 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 41.0 3.94e-01 80.4% 66.7%
5064368 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 43.0 3.46e-01 90.2% 70.8%
5016571 4040.1.1.1 ↗ alpha bundles › Fic-like › Fic-like › Fic-like › Fic 0.55 39.0 2.51e-01 78.4% 62.1%
4937952 206.1.3.3 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N 0.55 40.0 2.58e-01 82.4% 15.8%
5015782 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.54 44.0 3.01e-01 98.0% 82.3%
4932262 304.43.1.3 ↗ a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 › DUF555 0.54 39.0 3.13e-01 80.4% 86.1%
3790485 2.1.1.224 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 0.53 36.0 2.55e-01 70.6% 22.9%
4142330 4099.1.1.11 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14 0.53 42.0 2.99e-01 98.0% 30.3%
3712993 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 37.0 3.43e-01 78.4% 64.0%
3994884 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.52 39.0 2.51e-01 88.2% 32.9%
3609240 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.52 38.0 2.63e-01 82.4% 44.8%
3642725 3529.1.1.0 ↗ beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain 0.52 38.0 3.50e-01 82.4% 84.3%
3599909 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.52 41.0 3.32e-01 94.1% 52.7%
3448941 2.1.1.31 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C 0.51 38.0 3.55e-01 88.2% 64.4%
3997826 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.51 37.0 2.78e-01 82.4% 42.8%
4579381 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.51 37.0 2.67e-01 80.4% 31.9%
3466180 206.1.3.14 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSH_synth_ATP 0.50 41.0 2.86e-01 90.2% 69.1%
3590939 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.50 37.0 2.46e-01 86.3% 81.7%