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IMGVR_UViG_3300028602_001953-3300028602-Ga0265294_1002057811
Arc-VirIMGVR_UViG_3300028602_001953-3300028602-Ga0265294_1002057811
Identity
- Kingdom:
- archaea
Quality
80.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-73
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p0tA01 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.69 | 39.0 | 3.82e-01 | 100.0% | 50.0% |
| 2bbrA02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.56 | 39.0 | 3.56e-01 | 74.3% | 66.0% |
| 1e6bA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 45.0 | 3.88e-01 | 94.3% | 86.5% |
| 3vouB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 35.0 | 2.89e-01 | 100.0% | 35.3% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.52 | 44.0 | 3.76e-01 | 100.0% | 99.2% |
| 1z72A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.52 | 37.0 | 2.62e-01 | 75.7% | 62.5% |
| 2l1lB00 | 1.20.1440.250 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.51 | 40.0 | 3.29e-01 | 98.6% | 47.2% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 36.0 | 3.37e-01 | 72.9% | 72.4% |
| 4ywkA01 | 3.30.1640.10 | Alpha Beta › 2-Layer Sandwich › mini-chromosome maintenance (MCM) complex, chain A, domain 1 › mini-chromosome maintenance (MCM) complex, chain A, domain 1 | 0.50 | 40.0 | 3.74e-01 | 95.7% | 73.2% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3764771 | 101.1.2.365 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEK_C | 0.60 | 43.0 | 4.72e-01 | 98.6% | 100.0% |
| 5026218 | 142.1.1.51 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Ammonium_transp | 0.59 | 43.0 | 3.93e-01 | 77.1% | 70.0% |
| 4026102 | 592.1.1.1 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI | 0.58 | 41.0 | 4.03e-01 | 100.0% | 69.3% |
| 4935458 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.58 | 38.0 | 3.45e-01 | 71.4% | 49.5% |
| 3840404 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.58 | 44.0 | 4.66e-01 | 100.0% | 98.3% |
| 3496703 | 101.1.1.117 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CHDCT2 | 0.57 | 47.0 | 3.34e-01 | 100.0% | 29.5% |
| 5040483 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.56 | 36.0 | 3.33e-01 | 70.0% | 48.4% |
| 4032781 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.56 | 41.0 | 3.64e-01 | 78.6% | 71.4% |
| 4968601 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 46.0 | 4.20e-01 | 100.0% | 80.0% |
| 3327323 | 101.28.1.0 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins | 0.55 | 41.0 | 4.25e-01 | 100.0% | 87.7% |
| 4965582 | 4953.2.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain | 0.53 | 44.0 | 4.13e-01 | 98.6% | 74.4% |
| 4950284 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.53 | 36.0 | 3.27e-01 | 72.9% | 81.0% |
| 3165905 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.52 | 37.0 | 3.34e-01 | 77.1% | 80.0% |
| 4981630 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.52 | 38.0 | 3.65e-01 | 80.0% | 96.5% |
| 3492848 | 193.1.1.21 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › DUF5745 | 0.52 | 42.0 | 3.78e-01 | 92.9% | 81.0% |
| 3988376 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.51 | 37.0 | 3.48e-01 | 78.6% | 83.3% |
| 353472 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.51 | 39.0 | 3.36e-01 | 84.3% | 67.8% |
| 5023062 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.50 | 36.0 | 3.25e-01 | 78.6% | 71.4% |
| 3684651 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.50 | 35.0 | 3.29e-01 | 78.6% | 58.8% |