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IMGVR_UViG_3300028602_002087-3300028602-Ga0265294_1000673613
Arc-VirIMGVR_UViG_3300028602_002087-3300028602-Ga0265294_1000673613
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-71
Domain cluster:
rep: MF356679.1__ASR76378.1__D6_6__00006__D98-190
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11195.15 best | Tad2-like | 63.9 | 2.20e-17 | 100.0% | 95.9% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vmaA03 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.62 | 44.0 | 4.08e-01 | 81.2% | 57.8% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 42.0 | 4.29e-01 | 72.5% | 76.1% |
| 5wb2B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 41.0 | 4.04e-01 | 75.4% | 68.5% |
| 2ky8A00 | 3.30.890.10 | Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A | 0.59 | 43.0 | 4.33e-01 | 79.7% | 95.7% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 39.0 | 3.96e-01 | 75.4% | 71.6% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 44.0 | 2.93e-01 | 85.5% | 76.9% |
| 1f9qD00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 38.0 | 3.94e-01 | 75.4% | 74.2% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 40.0 | 4.08e-01 | 75.4% | 81.8% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.55 | 44.0 | 3.55e-01 | 88.4% | 55.7% |
| 6qm7K00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.55 | 46.0 | 3.42e-01 | 100.0% | 89.8% |
| 4ydsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 36.0 | 2.60e-01 | 71.0% | 21.2% |
| 2mp1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 38.0 | 3.69e-01 | 75.4% | 66.2% |
| 8djfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 42.0 | 2.85e-01 | 87.0% | 74.5% |
| 3vsfC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 44.0 | 2.88e-01 | 95.7% | 83.9% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 44.0 | 4.44e-01 | 100.0% | 95.8% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 2.97e-01 | 98.6% | 77.9% |
| 2bbhA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.52 | 38.0 | 3.00e-01 | 79.7% | 35.8% |
| 2oztA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 35.0 | 2.98e-01 | 71.0% | 98.3% |
| 5flwA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 42.0 | 2.82e-01 | 91.3% | 75.5% |
| 2k0mA00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 41.0 | 3.71e-01 | 92.8% | 75.0% |
| 1em2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 37.0 | 2.72e-01 | 78.3% | 26.2% |
| 3pieB05 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 42.0 | 4.33e-01 | 98.6% | 98.4% |
| 2ichA02 | 2.40.370.10 | Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain | 0.51 | 40.0 | 3.34e-01 | 88.4% | 92.3% |
| 5cbeE00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 34.0 | 3.51e-01 | 72.5% | 73.4% |
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.51 | 37.0 | 3.88e-01 | 81.2% | 88.3% |
| 3we5A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 39.0 | 3.25e-01 | 88.4% | 71.6% |
| 2y9mA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 38.0 | 3.07e-01 | 88.4% | 61.4% |
| 3qldA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 38.0 | 3.14e-01 | 88.4% | 92.1% |
| 4fd0A01 | 2.60.40.3630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 35.0 | 3.38e-01 | 72.5% | 91.1% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588096 | 4.1.1.189 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2829 | 0.91 | 85.0 | 8.33e-01 | 100.0% | 94.5% |
| 3164741 | 506.2.1.1 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UB2H | 0.65 | 45.0 | 4.33e-01 | 73.9% | 62.5% |
| 3974032 | 506.2.1.1 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UB2H | 0.65 | 46.0 | 4.24e-01 | 81.2% | 57.8% |
| 4339637 | 506.2.1.1 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UB2H | 0.64 | 45.0 | 4.30e-01 | 79.7% | 63.7% |
| 4632179 | 506.2.1.1 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UB2H | 0.62 | 44.0 | 4.03e-01 | 76.8% | 54.7% |
| 4993051 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.62 | 53.0 | 3.16e-01 | 98.6% | 65.3% |
| 3264469 | 4.1.1.309 ↗ | beta barrels › SH3 › SH3 › SH3 › MRP-S34 | 0.60 | 53.0 | 5.02e-01 | 100.0% | 90.6% |
| 181029 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.59 | 43.0 | 4.33e-01 | 79.7% | 95.7% |
| 3709343 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.58 | 45.0 | 3.66e-01 | 87.0% | 46.8% |
| 3781121 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 45.0 | 2.93e-01 | 87.0% | 73.1% |
| 4940229 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.56 | 48.0 | 3.06e-01 | 97.1% | 56.2% |
| 4124548 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.55 | 41.0 | 2.82e-01 | 79.7% | 28.7% |
| 3327525 | 3556.1.1.1 ↗ | a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 | 0.55 | 43.0 | 3.63e-01 | 91.3% | 63.7% |
| 4941788 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.55 | 47.0 | 3.05e-01 | 97.1% | 42.2% |
| 3238801 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.55 | 44.0 | 2.82e-01 | 95.7% | 21.6% |
| 3434770 | 3556.1.1.1 ↗ | a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 | 0.55 | 43.0 | 3.84e-01 | 89.9% | 74.3% |
| 4009799 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.54 | 41.0 | 3.59e-01 | 81.2% | 55.2% |
| 4295522 | 3556.1.1.1 ↗ | a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 | 0.54 | 43.0 | 3.83e-01 | 91.3% | 81.9% |
| 3852953 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 38.0 | 2.68e-01 | 75.4% | 28.3% |
| 2987525 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.54 | 44.0 | 2.94e-01 | 91.3% | 93.9% |
| 4447649 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.54 | 45.0 | 3.24e-01 | 98.6% | 81.3% |
| 3515806 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 38.0 | 3.08e-01 | 75.4% | 63.7% |
| 4052154 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.53 | 42.0 | 3.24e-01 | 88.4% | 85.9% |
| 5045400 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.53 | 44.0 | 2.82e-01 | 95.7% | 50.9% |
| 4024970 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 38.0 | 2.44e-01 | 81.2% | 26.3% |
| 5036533 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.52 | 40.0 | 2.84e-01 | 84.1% | 42.2% |
| 3284847 | 243.1.1.80 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26580 | 0.52 | 39.0 | 3.47e-01 | 82.6% | 99.1% |
| 3486847 | 4.1.1.284 ↗ | beta barrels › SH3 › SH3 › SH3 › SBNO | 0.51 | 41.0 | 3.62e-01 | 89.9% | 66.7% |
| 4241550 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.51 | 38.0 | 2.64e-01 | 79.7% | 30.0% |
| 5013017 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 41.0 | 3.30e-01 | 94.2% | 88.4% |
| 4379927 | 4.18.1.2 ↗ | beta barrels › SH3 › Plus3 › Plus3 › PF30080 | 0.51 | 43.0 | 3.29e-01 | 100.0% | 76.1% |
| 2043053 | 3414.1.1.1 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › Big_3 | 0.51 | 35.0 | 3.25e-01 | 72.5% | 78.9% |
| 3250883 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 40.0 | 3.51e-01 | 88.4% | 81.0% |
| 4040055 | 4.26.1.1 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 | 0.50 | 36.0 | 3.91e-01 | 76.8% | 93.1% |
| 3959060 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.50 | 39.0 | 3.06e-01 | 89.9% | 88.4% |
| 4179609 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.50 | 36.0 | 2.58e-01 | 76.8% | 38.6% |