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IMGVR_UViG_3300028602_002087-3300028602-Ga0265294_1000673614
Arc-VirIMGVR_UViG_3300028602_002087-3300028602-Ga0265294_1000673614
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-70
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11195.15 best | Tad2-like | 30.2 | 7.50e-07 | 86.8% | 95.9% |
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hxnA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.63 | 43.0 | 3.02e-01 | 70.6% | 83.3% |
| 5h4eA02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.63 | 49.0 | 4.15e-01 | 86.8% | 76.5% |
| 7uhyA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 44.0 | 2.86e-01 | 73.5% | 43.9% |
| 4gzuB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 42.0 | 3.86e-01 | 73.5% | 85.7% |
| 2jh3A03 | 3.30.1360.190 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.60 | 45.0 | 3.89e-01 | 83.8% | 89.3% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.59 | 41.0 | 3.53e-01 | 73.5% | 75.4% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 45.0 | 4.60e-01 | 88.2% | 89.4% |
| 2qc5A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 40.0 | 2.63e-01 | 72.1% | 44.0% |
| 2elbA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 43.0 | 3.86e-01 | 82.4% | 80.4% |
| 3pnnA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.58 | 44.0 | 2.94e-01 | 85.3% | 40.5% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 39.0 | 3.45e-01 | 72.1% | 66.7% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 40.0 | 3.80e-01 | 75.0% | 83.9% |
| 2d7iA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.57 | 40.0 | 3.21e-01 | 75.0% | 90.0% |
| 4lqzA00 | 2.40.128.570 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 | 0.57 | 42.0 | 3.50e-01 | 82.4% | 98.5% |
| 6e20A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 43.0 | 3.55e-01 | 85.3% | 95.5% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 44.0 | 3.55e-01 | 86.8% | 68.6% |
| 4bt2A01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.55 | 46.0 | 3.93e-01 | 95.6% | 94.7% |
| 5umsA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 38.0 | 3.43e-01 | 75.0% | 78.4% |
| 1xv2C01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.55 | 44.0 | 3.83e-01 | 91.2% | 96.4% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 42.0 | 3.26e-01 | 89.7% | 86.3% |
| 2g7jA00 | 3.90.1150.40 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Protein of unknown function DUF2002 | 0.54 | 38.0 | 3.29e-01 | 75.0% | 88.4% |
| 4divS02 | 2.60.120.860 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 39.0 | 3.44e-01 | 79.4% | 75.0% |
| 5wb2B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 31.0 | 3.08e-01 | 77.9% | 53.4% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.52 | 43.0 | 3.27e-01 | 97.1% | 44.1% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 40.0 | 3.61e-01 | 88.2% | 78.4% |
| 4n9jA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.51 | 36.0 | 3.22e-01 | 77.9% | 72.0% |
| 1xtfA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.50 | 41.0 | 2.62e-01 | 97.1% | 74.2% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588096 | 4.1.1.189 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2829 | 0.89 | 75.0 | 7.28e-01 | 88.2% | 97.3% |
| 3777607 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.66 | 47.0 | 3.48e-01 | 76.5% | 69.2% |
| 1146605 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.62 | 44.0 | 3.31e-01 | 75.0% | 83.7% |
| 3237575 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 47.0 | 3.16e-01 | 86.8% | 25.0% |
| 3843929 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.59 | 42.0 | 3.08e-01 | 75.0% | 68.9% |
| 3389671 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.58 | 41.0 | 3.05e-01 | 75.0% | 66.8% |
| 3708221 | 633.23.1.23 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin | 0.58 | 40.0 | 3.06e-01 | 73.5% | 75.3% |
| 5014724 | 295.1.1.51 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C | 0.58 | 38.0 | 3.46e-01 | 79.4% | 47.0% |
| 4100064 | 5.1.3.192 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF5050 | 0.58 | 41.0 | 2.72e-01 | 75.0% | 79.3% |
| 4032337 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.57 | 40.0 | 3.03e-01 | 77.9% | 30.3% |
| 3524259 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.57 | 42.0 | 3.12e-01 | 79.4% | 76.2% |
| 3911662 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.56 | 41.0 | 3.00e-01 | 79.4% | 68.8% |
| 3598725 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 41.0 | 3.04e-01 | 79.4% | 68.8% |
| 4941512 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 42.0 | 4.21e-01 | 85.3% | 81.4% |
| 3701133 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 40.0 | 2.91e-01 | 76.5% | 67.3% |
| 4298074 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.55 | 42.0 | 3.17e-01 | 82.4% | 86.3% |
| 3894967 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.55 | 39.0 | 2.87e-01 | 75.0% | 71.9% |
| 3996007 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.55 | 41.0 | 2.56e-01 | 82.4% | 93.3% |
| 3920905 | 220.1.1.19 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle | 0.55 | 38.0 | 3.24e-01 | 75.0% | 64.5% |
| 3463325 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.54 | 42.0 | 2.92e-01 | 86.8% | 33.3% |
| 3567571 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.54 | 41.0 | 3.15e-01 | 82.4% | 80.6% |
| 4260682 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.54 | 43.0 | 3.23e-01 | 89.7% | 70.3% |
| 4302938 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.54 | 40.0 | 3.73e-01 | 79.4% | 71.8% |
| 3900148 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.54 | 41.0 | 3.10e-01 | 83.8% | 91.1% |
| 3857386 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 41.0 | 3.14e-01 | 83.8% | 90.3% |
| 3593624 | 633.23.1.23 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin | 0.53 | 37.0 | 2.80e-01 | 76.5% | 74.2% |
| 3521604 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.53 | 37.0 | 2.72e-01 | 75.0% | 67.2% |
| 3574641 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.53 | 38.0 | 2.76e-01 | 77.9% | 69.2% |
| 3851969 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.52 | 40.0 | 3.05e-01 | 89.7% | 84.1% |
| 3848155 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.52 | 37.0 | 2.67e-01 | 76.5% | 69.0% |
| 3888075 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.52 | 37.0 | 2.74e-01 | 76.5% | 66.7% |
| 4880122 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 37.0 | 2.86e-01 | 76.5% | 79.9% |
| 3939513 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.51 | 36.0 | 2.52e-01 | 75.0% | 54.9% |