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IMGVR_UViG_3300028603_001236-3300028603-Ga0265293_1000780514

Arc-Vir

IMGVR_UViG_3300028603_001236-3300028603-Ga0265293_1000780514

Quality

69.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-60
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.79 54.0 4.58e-01 71.2% 44.7%
1qr0A02 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.51 36.0 3.00e-01 74.6% 51.5%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3169544 3922.1.1.138 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Utp11 0.87 61.0 4.30e-01 72.9% 27.5%
3716174 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.84 60.0 4.78e-01 81.4% 40.0%
3783976 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.84 60.0 5.10e-01 78.0% 48.9%
3939311 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.83 64.0 5.10e-01 100.0% 43.6%
3574593 109.4.1.5 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.83 57.0 3.75e-01 71.2% 19.2%
3538408 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.79 56.0 4.73e-01 74.6% 46.3%
3735991 109.4.1.526 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Atx10homo_assoc 0.74 55.0 3.08e-01 78.0% 18.2%
3926333 5054.1.1.59 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 0.73 64.0 3.86e-01 100.0% 14.8%
4595166 5076.2.1.0 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ 0.73 52.0 3.43e-01 74.6% 26.7%
3966249 4958.1.1.0 a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit 0.73 52.0 3.76e-01 76.3% 28.4%
3795771 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.73 60.0 3.62e-01 91.5% 21.3%
4025072 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.71 60.0 4.72e-01 91.5% 58.3%
3834208 2004.5.1.3 a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.68 47.0 3.07e-01 71.2% 25.0%
4328184 140.1.1.4 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e,DALR_2 0.64 43.0 2.95e-01 71.2% 58.5%
3923603 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.63 53.0 3.38e-01 98.3% 54.7%
3392896 1128.1.1.1 alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.58 41.0 3.59e-01 72.9% 98.8%
3740646 1128.1.1.0 alpha bundles › LYR protein › LYR protein › LYR protein 0.58 39.0 3.53e-01 71.2% 98.8%