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IMGVR_UViG_3300028603_001976-3300028603-Ga0265293_1001945810
Arc-VirIMGVR_UViG_3300028603_001976-3300028603-Ga0265293_1001945810
Identity
- Kingdom:
- archaea
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 389-507
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5wm1A05 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.74 | 24.0 | 2.51e-01 | 89.1% | 30.8% |
| 1ohgA01 | 3.30.2400.10 | Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › Major capsid protein gp5 | 0.64 | 29.0 | 2.75e-01 | 94.1% | 36.3% |
| 3e56A00 | 6.20.180.10 | Special › Other non-globular › Ubiquitin-like (UB roll) › | 0.61 | 18.0 | 2.22e-01 | 82.4% | 36.0% |
| 4jhmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 22.0 | 2.25e-01 | 85.7% | 33.3% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.53 | 20.0 | 2.29e-01 | 88.2% | 46.1% |
| 3gudA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 4.35e-01 | 88.2% | 88.2% |
D2
medium
residues 1-67
D3
medium
residues 83-145
D4
medium
residues 286-353
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5gv0A00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.63 | 48.0 | 3.73e-01 | 85.3% | 80.2% |
| 1a8dA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 44.0 | 3.04e-01 | 76.5% | 35.4% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 46.0 | 2.93e-01 | 80.9% | 36.2% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.61 | 52.0 | 4.08e-01 | 95.6% | 80.5% |
| 1k1yB02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.60 | 48.0 | 3.30e-01 | 89.7% | 92.1% |
| 2qzuA02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.60 | 43.0 | 4.09e-01 | 79.4% | 68.2% |
| 2mhgA00 | 2.20.130.30 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › Protein of unknown function DUF2782 | 0.58 | 43.0 | 4.26e-01 | 82.4% | 81.3% |
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.56 | 37.0 | 3.49e-01 | 72.1% | 52.3% |
| 3mwxA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 46.0 | 3.00e-01 | 91.2% | 87.0% |
| 4bf3A00 | 2.30.31.50 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F | 0.56 | 46.0 | 3.76e-01 | 91.2% | 80.5% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 38.0 | 3.67e-01 | 72.1% | 72.8% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.55 | 47.0 | 3.59e-01 | 100.0% | 54.8% |
| 3ecqA01 | 2.60.120.870 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 3.48e-01 | 98.5% | 76.5% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.55 | 40.0 | 3.31e-01 | 76.5% | 50.8% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 44.0 | 2.91e-01 | 94.1% | 38.1% |
| 2k6hA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.54 | 46.0 | 3.50e-01 | 98.5% | 54.4% |
| 3mpxA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 36.0 | 3.29e-01 | 70.6% | 68.0% |
| 4a6fA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 43.0 | 3.68e-01 | 86.8% | 72.4% |
| 4fbcA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.53 | 45.0 | 3.43e-01 | 98.5% | 51.7% |
| 2rgnB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 41.0 | 3.39e-01 | 86.8% | 58.5% |
| 1eazA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 41.0 | 3.58e-01 | 86.8% | 71.8% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 37.0 | 3.14e-01 | 77.9% | 47.5% |
| 3tu3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.50 | 40.0 | 3.42e-01 | 91.2% | 95.8% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4029923 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.66 | 46.0 | 3.21e-01 | 73.5% | 45.8% |
| 4083856 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 43.0 | 2.64e-01 | 73.5% | 37.7% |
| 2095503 | 3146.1.1.1 ↗ | a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H | 0.62 | 55.0 | 3.28e-01 | 100.0% | 19.5% |
| 3589304 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.61 | 41.0 | 4.03e-01 | 70.6% | 62.7% |
| 3929074 | 220.1.1.125 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_PLEKHM2 | 0.60 | 52.0 | 4.01e-01 | 95.6% | 65.3% |
| 3589839 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.60 | 48.0 | 3.14e-01 | 91.2% | 86.0% |
| 4428765 | 12.3.1.15 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › AmyA-gluTrfs_C | 0.60 | 49.0 | 3.24e-01 | 91.2% | 90.5% |
| 3231711 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 47.0 | 4.12e-01 | 89.7% | 72.0% |
| 5018712 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.57 | 39.0 | 3.63e-01 | 73.5% | 54.4% |
| 3507415 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.57 | 42.0 | 3.12e-01 | 80.9% | 58.4% |
| 1005444 | 295.2.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › Outer surface protein E › Outer surface protein E › OspE | 0.55 | 48.0 | 3.72e-01 | 98.5% | 73.5% |
| 3970247 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.55 | 43.0 | 3.63e-01 | 83.8% | 60.0% |
| 3576652 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.54 | 44.0 | 3.02e-01 | 97.1% | 45.1% |
| 3596085 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.54 | 41.0 | 3.94e-01 | 83.8% | 87.5% |
| 3274459 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 44.0 | 3.61e-01 | 89.7% | 67.2% |
| 4117150 | 212.1.1.10 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › RNase_PH | 0.53 | 41.0 | 3.25e-01 | 83.8% | 85.7% |
| 3326913 | 12.3.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid | 0.52 | 42.0 | 2.97e-01 | 92.6% | 88.4% |
| 3266642 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 42.0 | 3.23e-01 | 88.2% | 46.5% |
| 3263180 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 44.0 | 3.75e-01 | 92.6% | 63.6% |
| 3504193 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.52 | 43.0 | 3.49e-01 | 91.2% | 64.6% |
| 3566576 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.52 | 43.0 | 3.31e-01 | 92.6% | 49.4% |
| 3627627 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.52 | 43.0 | 3.38e-01 | 92.6% | 64.8% |
| 3243986 | 220.1.1.79 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › TBC1D23_C | 0.52 | 42.0 | 3.67e-01 | 89.7% | 78.1% |
| 3167463 | 212.1.1.10 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › RNase_PH | 0.51 | 37.0 | 2.86e-01 | 77.9% | 75.5% |
| 3903309 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.50 | 42.0 | 3.07e-01 | 95.6% | 52.0% |