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IMGVR_UViG_3300028603_004314-3300028603-Ga0265293_100080555
Arc-VirIMGVR_UViG_3300028603_004314-3300028603-Ga0265293_100080555
Identity
- Kingdom:
- archaea
Quality
72.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-64
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dk1A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.58 | 31.0 | 3.44e-01 | 84.4% | 64.0% |
| 1a2fA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.58 | 43.0 | 3.53e-01 | 81.2% | 64.5% |
| 2vhjA02 | 2.30.270.20 | Mainly Beta › Roll › duf1285 protein fold › | 0.56 | 31.0 | 3.13e-01 | 78.1% | 48.4% |
| 2mdiA00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.51 | 34.0 | 3.62e-01 | 71.9% | 85.7% |
| 4tvcA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.50 | 31.0 | 2.28e-01 | 71.9% | 21.3% |
| 1sr4A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 38.0 | 2.93e-01 | 85.9% | 62.3% |
| 3kflA02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.50 | 40.0 | 3.32e-01 | 89.1% | 74.4% |
| 2p39A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 33.0 | 2.67e-01 | 78.1% | 31.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3199196 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.78 | 40.0 | 5.16e-01 | 73.4% | 91.4% |
| 3380380 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 39.0 | 5.00e-01 | 73.4% | 91.4% |
| 3229548 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 44.0 | 5.15e-01 | 82.8% | 93.3% |
| 3701625 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.60 | 31.0 | 3.51e-01 | 76.6% | 64.4% |
| 4163789 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.57 | 42.0 | 3.51e-01 | 78.1% | 81.0% |
| 4025577 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.55 | 42.0 | 3.02e-01 | 82.8% | 47.0% |
| 4421229 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.54 | 39.0 | 3.31e-01 | 76.6% | 80.6% |
| 3384591 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 39.0 | 3.82e-01 | 78.1% | 80.0% |
| 3413714 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.52 | 41.0 | 2.80e-01 | 84.4% | 40.5% |
| 3373813 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.51 | 37.0 | 2.29e-01 | 82.8% | 20.9% |