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IMGVR_UViG_3300028624_000018-3300028624-Ga0302246_100042340
Arc-VirIMGVR_UViG_3300028624_000018-3300028624-Ga0302246_100042340
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 492-587
Domain cluster:
rep: IMGVR_UViG_3300028644_000039-3300028644-Ga0302238_100089738__D204-281
D2
medium
residues 77-88_167-265
D3
medium
residues 89-166
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i8oA03 | 1.10.8.1130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial toxin RNase RnlA/LsoA, C-terminal Dmd-binding domain | 0.66 | 38.0 | 4.05e-01 | 74.4% | 65.7% |
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.54 | 37.0 | 3.67e-01 | 73.1% | 97.6% |
| 2z3xA00 | 6.10.10.80 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like | 0.50 | 32.0 | 3.54e-01 | 70.5% | 89.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024243 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.57 | 40.0 | 4.06e-01 | 71.8% | 97.3% |
| 4406284 | 152.1.2.1 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 | 0.54 | 34.0 | 3.56e-01 | 89.7% | 71.4% |
| 3596654 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 41.0 | 2.96e-01 | 88.5% | 71.5% |
D4
medium
residues 266-425
Domain cluster:
rep: SRR1747065_scaffold_5_prodigal-single.1__X__X__00153__D1-142
D5
medium
residues 426-439_451-491
Domain cluster:
rep: IMGVR_UViG_3300028644_000039-3300028644-Ga0302238_100089738__D133-183