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IMGVR_UViG_3300028624_000018-3300028624-Ga0302246_100042342
Arc-VirIMGVR_UViG_3300028624_000018-3300028624-Ga0302246_100042342
Identity
- Kingdom:
- archaea
Quality
67.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-109
D2
medium
residues 128-196
Domain cluster:
rep: PHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00151__DFULL
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13306.13 best | LRR_5 | 52.0 | 9.10e-14 | 97.1% | 50.4% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cp6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.94 | 89.0 | 5.29e-01 | 100.0% | 31.4% |
| 4fs7A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.93 | 88.0 | 5.29e-01 | 100.0% | 24.0% |
| 4fd0A02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.91 | 87.0 | 5.44e-01 | 100.0% | 30.8% |
| 4h09D00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.89 | 83.0 | 5.05e-01 | 100.0% | 33.4% |
| 3sb4A02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.89 | 83.0 | 6.24e-01 | 100.0% | 47.7% |
| 4ojuA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.89 | 84.0 | 6.43e-01 | 100.0% | 48.6% |
| 3sb4A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.89 | 82.0 | 5.90e-01 | 98.6% | 58.0% |
| 2xwtC00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.81 | 71.0 | 4.81e-01 | 95.7% | 30.8% |
| 2id5A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.80 | 68.0 | 4.24e-01 | 94.2% | 18.8% |
| 4xsqB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.78 | 68.0 | 4.99e-01 | 95.7% | 39.1% |
| 1xkuA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.77 | 67.0 | 4.32e-01 | 95.7% | 23.3% |
| 1w8aA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.77 | 67.0 | 4.91e-01 | 98.6% | 39.7% |
| 4tzhA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.76 | 68.0 | 4.93e-01 | 100.0% | 37.9% |
| 4ezgA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.73 | 64.0 | 4.74e-01 | 100.0% | 51.4% |
| 2lz0A00 | 3.40.50.12480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 57.0 | 5.04e-01 | 98.6% | 67.0% |
| 2i6dA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.65 | 46.0 | 3.58e-01 | 75.4% | 38.2% |
| 4jyjB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.64 | 55.0 | 3.76e-01 | 100.0% | 42.5% |
| 5vipB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.61 | 48.0 | 3.49e-01 | 91.3% | 48.0% |
| 3nzeA00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 48.0 | 3.31e-01 | 91.3% | 31.6% |
| 3u9rB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.56 | 46.0 | 3.18e-01 | 95.7% | 33.7% |
| 1a97B00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 38.0 | 3.11e-01 | 88.4% | 37.8% |
| 4kruA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 38.0 | 2.77e-01 | 81.2% | 38.3% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5033803 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.94 | 90.0 | 6.04e-01 | 100.0% | 42.7% |
| 1501314 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.94 | 89.0 | 5.29e-01 | 100.0% | 31.4% |
| 4148563 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.93 | 89.0 | 5.18e-01 | 100.0% | 19.8% |
| 2576217 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.93 | 89.0 | 6.01e-01 | 100.0% | 33.2% |
| 1281087 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.93 | 88.0 | 5.29e-01 | 100.0% | 24.0% |
| 1295939 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.89 | 83.0 | 5.05e-01 | 100.0% | 33.4% |
| 1297113 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.89 | 84.0 | 6.41e-01 | 100.0% | 48.3% |
| 1281127 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.89 | 80.0 | 5.81e-01 | 95.7% | 47.9% |
| 4164820 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.79 | 70.0 | 5.16e-01 | 98.6% | 42.3% |
| 3333892 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.78 | 69.0 | 4.41e-01 | 98.6% | 22.5% |
| 3443408 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.78 | 71.0 | 5.42e-01 | 100.0% | 78.0% |
| 1254903 | 207.1.1.166 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_5, LRR_6, LRR_8 | 0.77 | 69.0 | 4.14e-01 | 98.6% | 15.9% |
| 5048337 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.77 | 68.0 | 5.27e-01 | 98.6% | 54.7% |
| 3329845 | 207.1.1.190 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_13 | 0.77 | 69.0 | 5.12e-01 | 98.6% | 41.8% |
| 3920962 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.77 | 69.0 | 4.35e-01 | 100.0% | 22.0% |
| 3613454 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.77 | 69.0 | 4.63e-01 | 98.6% | 36.3% |
| 3615230 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.77 | 68.0 | 4.57e-01 | 98.6% | 34.2% |
| 3820991 | 207.1.1.133 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 | 0.76 | 68.0 | 5.11e-01 | 100.0% | 43.5% |
| 3439677 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.76 | 68.0 | 5.17e-01 | 98.6% | 44.5% |
| 3381719 | 207.1.1.194 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14, LRR_R13L1-DRL21 | 0.76 | 67.0 | 3.95e-01 | 98.6% | 13.1% |
| 2325379 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.76 | 67.0 | 4.07e-01 | 98.6% | 18.1% |
| 3920568 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.76 | 67.0 | 3.85e-01 | 100.0% | 11.5% |
| 3709719 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.76 | 66.0 | 4.19e-01 | 98.6% | 20.0% |
| 4328381 | 207.1.1.144 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4 | 0.75 | 67.0 | 4.27e-01 | 98.6% | 21.2% |
| 3299931 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.75 | 64.0 | 4.24e-01 | 94.2% | 26.3% |
| 3419084 | 207.1.1.280 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_13, LRR_14 | 0.75 | 66.0 | 4.49e-01 | 98.6% | 30.2% |
| 3374064 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.75 | 66.0 | 3.86e-01 | 98.6% | 13.3% |
| 3465224 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.74 | 64.0 | 4.64e-01 | 97.1% | 35.7% |
| 3343471 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.74 | 67.0 | 4.33e-01 | 100.0% | 42.3% |
| 3700097 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.73 | 64.0 | 5.57e-01 | 97.1% | 67.6% |
| 3316459 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.73 | 64.0 | 4.12e-01 | 98.6% | 22.4% |
| None | — | 0.73 | 63.0 | 3.87e-01 | 97.1% | 19.1% | |
| 3334644 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.73 | 64.0 | 4.75e-01 | 98.6% | 41.7% |
| 3260678 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.72 | 65.0 | 4.53e-01 | 100.0% | 67.0% |
| 3815361 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.72 | 63.0 | 4.40e-01 | 98.6% | 32.0% |
| 3435910 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 63.0 | 4.21e-01 | 100.0% | 25.5% |
| 3783901 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 62.0 | 3.82e-01 | 98.6% | 19.5% |
| 3265378 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.70 | 60.0 | 4.77e-01 | 100.0% | 45.9% |
| 3257223 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.69 | 60.0 | 3.76e-01 | 98.6% | 18.2% |
| 3269035 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.69 | 58.0 | 4.41e-01 | 94.2% | 40.0% |
| 3662756 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.68 | 58.0 | 3.93e-01 | 97.1% | 30.2% |
| 3959630 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.65 | 57.0 | 4.41e-01 | 100.0% | 75.5% |
| 3958419 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.62 | 54.0 | 4.04e-01 | 98.6% | 77.2% |
| 3649329 | 2486.1.1.11 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_2 | 0.62 | 53.0 | 4.30e-01 | 98.6% | 92.1% |
D3
medium
residues 197-347
Domain cluster:
rep: IMGVR_UViG_3300038321_000352-3300038321-Ga0134857_002293_5490_6890__D36-166
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13306.13 best | LRR_5 | 118.6 | 2.40e-34 | 78.8% | 80.3% |
D4
medium
residues 348-402_415-431
D5
medium
residues 403-414_432-566