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IMGVR_UViG_3300028628_000295-3300028628-Ga0302249_10066231
Arc-VirIMGVR_UViG_3300028628_000295-3300028628-Ga0302249_10066231
Identity
- Kingdom:
- archaea
Quality
79.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-33
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2aklA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.66 | 51.0 | 4.87e-01 | 97.0% | 76.7% |
| 7zj3D01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 48.0 | 3.95e-01 | 97.0% | 46.9% |
| 3u50C02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.64 | 50.0 | 4.98e-01 | 100.0% | 91.4% |
| 2pziB02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 50.0 | 3.43e-01 | 100.0% | 40.0% |
| 3m7nA03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.64 | 47.0 | 4.75e-01 | 93.9% | 85.3% |
| 2xzm901 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.61 | 45.0 | 3.79e-01 | 93.9% | 43.1% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.54 | 40.0 | 3.49e-01 | 93.9% | 50.9% |
| 3vkhB07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 37.0 | 2.51e-01 | 93.9% | 39.7% |
| 2jubA01 | 3.30.160.860 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 35.0 | 3.55e-01 | 72.7% | 86.5% |
| 1iq8A03 | 3.10.450.90 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain | 0.50 | 35.0 | 3.04e-01 | 90.9% | 74.3% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4038151 | 375.1.1.202 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tmemb_55A | 0.86 | 70.0 | 6.94e-01 | 93.9% | 94.3% |
| 3891437 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.86 | 72.0 | 6.18e-01 | 100.0% | 60.0% |
| 3881241 | 3928.1.1.7 ↗ | alpha bundles › Cell division protein CrgA › Cell division protein CrgA › Cell division protein CrgA › Tmemb_55A | 0.84 | 71.0 | 7.02e-01 | 100.0% | 100.0% |
| 4968629 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.83 | 71.0 | 6.12e-01 | 100.0% | 66.7% |
| 4028456 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.83 | 70.0 | 6.43e-01 | 100.0% | 77.8% |
| 5066735 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.83 | 70.0 | 6.19e-01 | 100.0% | 68.0% |
| 5075187 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.82 | 70.0 | 5.79e-01 | 100.0% | 55.0% |
| 4015648 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.82 | 65.0 | 6.56e-01 | 93.9% | 93.9% |
| 4995783 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.81 | 67.0 | 6.43e-01 | 100.0% | 87.5% |
| 4991529 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.80 | 65.0 | 5.54e-01 | 100.0% | 58.3% |
| 5060491 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.80 | 64.0 | 4.48e-01 | 100.0% | 28.3% |
| 4947213 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.80 | 66.0 | 5.74e-01 | 100.0% | 63.6% |
| 4969798 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.78 | 64.0 | 5.57e-01 | 100.0% | 63.6% |
| 3741002 | 192.29.1.117 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Ima1_N | 0.78 | 64.0 | 6.38e-01 | 100.0% | 100.0% |
| 4979347 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.78 | 64.0 | 5.17e-01 | 100.0% | 48.6% |
| 4028457 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 59.0 | 6.05e-01 | 90.9% | 100.0% |
| 3261059 | 376.1.6.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR_1 | 0.78 | 61.0 | 4.93e-01 | 100.0% | 66.7% |
| 3179128 | 375.1.1.211 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ima1_N | 0.77 | 64.0 | 6.15e-01 | 100.0% | 92.5% |
| 3739700 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 59.0 | 5.99e-01 | 90.9% | 100.0% |
| 5030549 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.77 | 62.0 | 5.43e-01 | 100.0% | 63.6% |
| 5077070 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.77 | 63.0 | 5.37e-01 | 100.0% | 55.0% |
| 3380132 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.77 | 63.0 | 6.04e-01 | 100.0% | 85.0% |
| 5076006 | 109.4.1.195 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 | 0.77 | 61.0 | 3.63e-01 | 97.0% | 12.1% |
| 4978165 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.77 | 64.0 | 3.96e-01 | 100.0% | 19.5% |
| 4979574 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.77 | 63.0 | 4.06e-01 | 100.0% | 21.8% |
| 4945444 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 61.0 | 6.10e-01 | 100.0% | 94.3% |
| 4972401 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.76 | 62.0 | 3.84e-01 | 100.0% | 17.7% |
| 5041477 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.76 | 60.0 | 5.21e-01 | 100.0% | 58.3% |
| 3507653 | 375.4.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like | 0.76 | 61.0 | 3.98e-01 | 100.0% | 20.2% |
| 3786601 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.76 | 59.0 | 5.85e-01 | 93.9% | 88.6% |
| 5047273 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 61.0 | 5.90e-01 | 100.0% | 82.5% |
| 4960851 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 62.0 | 6.20e-01 | 100.0% | 94.3% |
| 4999482 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.76 | 62.0 | 3.85e-01 | 100.0% | 17.1% |
| 4950325 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.76 | 60.0 | 4.65e-01 | 100.0% | 41.2% |
| 4970821 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.76 | 62.0 | 5.01e-01 | 100.0% | 48.6% |
| 3678606 | 375.1.1.212 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_FGT1_2 | 0.75 | 60.0 | 5.97e-01 | 100.0% | 94.3% |
| 3825063 | 1067.1.1.0 ↗ | few secondary structure elements › pheromone Ep-1 › pheromone Ep-1 › pheromone Ep-1 | 0.75 | 60.0 | 5.96e-01 | 100.0% | 94.3% |
| 3437434 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.75 | 57.0 | 5.75e-01 | 100.0% | 91.4% |
| 3362800 | 375.1.1.193 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_FGT1_1 | 0.75 | 59.0 | 5.55e-01 | 100.0% | 75.6% |
| 3656347 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 58.0 | 5.80e-01 | 97.0% | 88.6% |
| 3671234 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.75 | 59.0 | 5.90e-01 | 100.0% | 94.3% |
| 5067229 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 59.0 | 5.53e-01 | 97.0% | 71.1% |
| 3537482 | 376.1.4.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR_1 | 0.74 | 58.0 | 5.32e-01 | 100.0% | 68.0% |
| 3328437 | 375.1.1.139 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › EDR4-like_1st | 0.74 | 58.0 | 5.70e-01 | 100.0% | 85.0% |
| 3802581 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 57.0 | 5.72e-01 | 100.0% | 94.3% |
| 4941600 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.74 | 60.0 | 3.92e-01 | 100.0% | 23.7% |
| 3907697 | 376.1.4.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR_1 | 0.73 | 56.0 | 4.59e-01 | 100.0% | 76.0% |
| 3606741 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 59.0 | 5.84e-01 | 100.0% | 91.4% |
| 4941496 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.73 | 59.0 | 3.70e-01 | 100.0% | 18.5% |
| 3303263 | 376.1.6.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › zf-LSD1 | 0.72 | 55.0 | 5.43e-01 | 100.0% | 95.0% |
| 5017725 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.72 | 58.0 | 3.68e-01 | 100.0% | 19.5% |
| 3826688 | 375.1.1.139 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › EDR4-like_1st | 0.72 | 52.0 | 5.35e-01 | 87.9% | 100.0% |
| 3170762 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 56.0 | 3.25e-01 | 100.0% | 46.1% |
| 3514931 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 57.0 | 5.56e-01 | 100.0% | 85.0% |
| 5047885 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 56.0 | 5.31e-01 | 100.0% | 73.3% |
| 3419900 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.71 | 53.0 | 5.32e-01 | 100.0% | 91.4% |
| 3681134 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 56.0 | 5.08e-01 | 100.0% | 66.0% |
| 3605785 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 54.0 | 3.31e-01 | 100.0% | 20.0% |
| 5036396 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 54.0 | 5.20e-01 | 93.9% | 82.1% |
| 4945128 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 52.0 | 5.21e-01 | 97.0% | 97.1% |
| 4122844 | 375.1.1.213 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TiaS | 0.65 | 52.0 | 5.03e-01 | 100.0% | 85.0% |
| 3992738 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 51.0 | 4.72e-01 | 97.0% | 71.1% |
| 3506351 | 375.1.1.44 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-NADH-PPase | 0.62 | 51.0 | 5.06e-01 | 97.0% | 97.1% |
| 3423212 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.62 | 44.0 | 3.47e-01 | 81.8% | 51.2% |
| 4282792 | 375.1.1.44 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-NADH-PPase | 0.61 | 45.0 | 4.52e-01 | 90.9% | 85.7% |
| 3980811 | 375.1.1.60 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PriA_CRR | 0.60 | 50.0 | 4.24e-01 | 100.0% | 91.7% |
| 5049039 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.60 | 46.0 | 2.64e-01 | 90.9% | 7.6% |
| 5055298 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 44.0 | 3.88e-01 | 93.9% | 55.0% |