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IMGVR_UViG_3300028630_000131-3300028630-Ga0302247_100520912
Arc-VirIMGVR_UViG_3300028630_000131-3300028630-Ga0302247_100520912
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 52-171_311-336
Domain cluster:
rep: OR354825.1__WNM51604.1__CoNPh2_CDS0050__00048__D273-380_559-584
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10145.15 best | PhageMin_Tail | 50.8 | 2.90e-13 | 74.7% | 43.3% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aljA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 38.0 | 3.40e-01 | 75.3% | 98.2% |
| 5dz2A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 38.0 | 2.97e-01 | 76.7% | 82.9% |
| 1wmwB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 44.0 | 3.46e-01 | 95.9% | 97.8% |
| 6kd7A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 39.0 | 3.08e-01 | 82.2% | 69.1% |
| 4o6mA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.50 | 39.0 | 3.58e-01 | 82.2% | 87.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032310 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.90 | 85.0 | 8.43e-01 | 99.3% | 94.7% |
| 3941716 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.89 | 67.0 | 7.10e-01 | 76.7% | 90.0% |
| 3981280 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.88 | 73.0 | 7.40e-01 | 85.6% | 98.6% |
| 3963765 | 159.1.2.5 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › TMP_3 | 0.71 | 66.0 | 5.99e-01 | 99.3% | 96.3% |
| 3980709 | 103.4.1.27 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TMP_2 | 0.70 | 59.0 | 5.74e-01 | 88.4% | 100.0% |
| 3839096 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.55 | 44.0 | 4.01e-01 | 84.9% | 81.0% |
| 3541263 | 604.1.1.227 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF27002 | 0.53 | 29.0 | 3.00e-01 | 98.6% | 53.8% |
| 4556778 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.52 | 30.0 | 3.35e-01 | 95.2% | 72.2% |
| 5022856 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.51 | 28.0 | 3.07e-01 | 94.5% | 62.1% |
D2
medium
residues 172-310
Domain cluster:
rep: MZ955870.1__UAV84845.1__BV113_00510__00051__D183-343
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10145.15 best | PhageMin_Tail | 70.5 | 2.60e-19 | 78.4% | 52.7% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 39.0 | 3.81e-01 | 70.5% | 94.0% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 38.0 | 4.37e-01 | 90.6% | 97.1% |
| 3vkgA09 | 1.20.920.30 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.54 | 44.0 | 4.36e-01 | 97.8% | 83.3% |
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.54 | 36.0 | 3.26e-01 | 91.4% | 48.7% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 40.0 | 4.38e-01 | 92.8% | 96.5% |
| 2ee7A01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.53 | 35.0 | 3.80e-01 | 93.5% | 80.0% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 40.0 | 4.39e-01 | 92.8% | 97.3% |
| 6ks6Z01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.52 | 45.0 | 3.70e-01 | 97.1% | 62.8% |
| 4kt3A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.51 | 45.0 | 4.55e-01 | 100.0% | 94.3% |
| 3fflA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 32.0 | 3.39e-01 | 71.9% | 68.3% |
| 1puoB00 | 1.20.920.50 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.51 | 39.0 | 3.91e-01 | 82.0% | 93.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030882 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.86 | 82.0 | 6.98e-01 | 100.0% | 69.5% |
| 3945172 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.70 | 62.0 | 5.38e-01 | 97.8% | 64.3% |
| 3578872 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.52 | 40.0 | 3.91e-01 | 82.0% | 86.5% |
| 3652068 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.50 | 42.0 | 4.23e-01 | 97.8% | 89.9% |