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IMGVR_UViG_3300028631_000107-3300028631-Ga0302241_100593013
Arc-VirIMGVR_UViG_3300028631_000107-3300028631-Ga0302241_100593013
Identity
- Kingdom:
- archaea
Quality
72.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 76-132
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4at7A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 43.0 | 3.24e-01 | 77.2% | 38.2% |
| 2o36A02 | 1.10.1370.10 | Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › Neurolysin, domain 3 | 0.57 | 38.0 | 2.39e-01 | 70.2% | 35.7% |
| 7s0tF01 | 3.60.21.50 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.56 | 40.0 | 2.53e-01 | 77.2% | 59.1% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.56 | 39.0 | 3.34e-01 | 75.4% | 61.8% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.55 | 44.0 | 2.87e-01 | 93.0% | 97.1% |
| 2qy6A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 41.0 | 2.82e-01 | 86.0% | 71.9% |
| 3w1yB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 36.0 | 3.11e-01 | 78.9% | 39.4% |
| 4zrlA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 44.0 | 3.54e-01 | 94.7% | 94.9% |
| 2kz0A01 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.52 | 32.0 | 3.08e-01 | 100.0% | 49.3% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.52 | 36.0 | 3.22e-01 | 73.7% | 89.3% |
| 1xhsA00 | 3.10.490.10 | Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like | 0.51 | 34.0 | 2.85e-01 | 70.2% | 62.8% |
| 3mxqC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 42.0 | 3.40e-01 | 98.2% | 59.2% |
| 2c7yA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 41.0 | 2.56e-01 | 93.0% | 49.1% |
| 3a0rA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 42.0 | 3.49e-01 | 94.7% | 57.5% |
| 7qprA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 40.0 | 3.05e-01 | 86.0% | 87.4% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 36.0 | 3.33e-01 | 80.7% | 93.9% |
| 2x8xX01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 36.0 | 3.34e-01 | 77.2% | 94.7% |
| 2fywA02 | 3.40.1390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1 › NIF3 (NGG1p interacting factor 3)-like | 0.50 | 34.0 | 2.73e-01 | 70.2% | 64.0% |
| 5mpoB00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.50 | 36.0 | 3.25e-01 | 78.9% | 92.9% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4990439 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.62 | 44.0 | 3.72e-01 | 75.4% | 43.0% |
| 5011307 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.62 | 43.0 | 3.62e-01 | 75.4% | 42.0% |
| None | — | 0.61 | 53.0 | 3.11e-01 | 100.0% | 69.0% | |
| 5012937 | 304.116.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor › acVLRF1 | 0.60 | 42.0 | 3.61e-01 | 77.2% | 44.2% |
| 5043656 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.59 | 42.0 | 3.58e-01 | 75.4% | 45.3% |
| 3793430 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.58 | 41.0 | 3.52e-01 | 75.4% | 69.5% |
| 3377656 | 207.1.1.137 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8 | 0.56 | 37.0 | 2.18e-01 | 70.2% | 7.2% |
| 4274743 | 2004.1.1.44 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PRK | 0.56 | 40.0 | 2.70e-01 | 75.4% | 71.6% |
| 4940657 | 101.1.2.269 ↗ | alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea | 0.55 | 38.0 | 2.76e-01 | 71.9% | 51.2% |
| 3428560 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.55 | 36.0 | 3.73e-01 | 70.2% | 70.9% |
| 5051542 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 43.0 | 3.11e-01 | 91.2% | 41.1% |
| 3208120 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.55 | 39.0 | 2.92e-01 | 75.4% | 65.2% |
| 3784357 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.55 | 44.0 | 2.97e-01 | 91.2% | 88.3% |
| 3594135 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.54 | 37.0 | 3.07e-01 | 70.2% | 44.0% |
| 5078051 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.54 | 44.0 | 2.84e-01 | 93.0% | 36.2% |
| 3883169 | 5001.1.1.3 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 | 0.54 | 43.0 | 2.82e-01 | 89.5% | 93.7% |
| 3560258 | 7579.1.1.81 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Arb2 | 0.54 | 45.0 | 2.88e-01 | 98.2% | 62.8% |
| 3709607 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 38.0 | 2.69e-01 | 73.7% | 24.0% |
| 3629360 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.54 | 45.0 | 3.11e-01 | 96.5% | 49.5% |
| 3443252 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.53 | 35.0 | 3.85e-01 | 70.2% | 93.3% |
| 3479024 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.53 | 35.0 | 3.55e-01 | 70.2% | 70.9% |
| 3421312 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.52 | 36.0 | 3.41e-01 | 71.9% | 60.0% |
| 5046056 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.52 | 40.0 | 3.16e-01 | 87.7% | 69.6% |
| 3482243 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.52 | 35.0 | 3.54e-01 | 70.2% | 70.9% |
| 3690013 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.52 | 39.0 | 3.06e-01 | 82.5% | 51.5% |
| 3491256 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.51 | 34.0 | 2.52e-01 | 71.9% | 62.3% |
| 3447934 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.51 | 35.0 | 3.01e-01 | 73.7% | 70.0% |
| 4167818 | 2003.1.5.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 | 0.50 | 36.0 | 2.39e-01 | 78.9% | 70.4% |