←Back to structures
IMGVR_UViG_3300028635_000520-3300028635-Ga0302245_10026243
Arc-VirIMGVR_UViG_3300028635_000520-3300028635-Ga0302245_10026243
Identity
- Kingdom:
- archaea
Quality
68.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-151
Domain cluster:
rep: NODE_14_length_293356_cov_397-335986_prodigal-single.1__X__X__00103__D235-382
D2
high
residues 220-356
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.61 | 48.0 | 4.96e-01 | 81.8% | 95.3% |
| 4ntqA00 | 3.10.380.20 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain | 0.60 | 33.0 | 4.25e-01 | 81.8% | 96.1% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 48.0 | 4.97e-01 | 84.7% | 94.6% |
| 1pu4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.56 | 38.0 | 2.72e-01 | 70.1% | 92.4% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 27.0 | 3.69e-01 | 82.5% | 100.0% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.54 | 37.0 | 4.22e-01 | 80.3% | 93.3% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 38.0 | 3.86e-01 | 93.4% | 76.3% |
| 4g2sA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.52 | 36.0 | 4.00e-01 | 78.1% | 89.6% |
| 1nkgA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 39.0 | 3.15e-01 | 77.4% | 84.9% |
| 5h9kA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 38.0 | 3.70e-01 | 75.9% | 87.7% |
| 1x53A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 37.0 | 3.84e-01 | 92.0% | 80.2% |
| 3wirA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.51 | 39.0 | 3.21e-01 | 81.0% | 94.5% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.51 | 39.0 | 3.62e-01 | 81.8% | 69.5% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.51 | 38.0 | 2.70e-01 | 79.6% | 37.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954761 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.65 | 52.0 | 5.53e-01 | 87.6% | 94.2% |
| 5013018 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.65 | 42.0 | 4.36e-01 | 86.9% | 69.2% |
| 4954762 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.63 | 48.0 | 5.04e-01 | 78.8% | 93.6% |
| 4419937 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.58 | 30.0 | 3.76e-01 | 73.0% | 81.2% |
| 3710638 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.55 | 41.0 | 3.78e-01 | 78.1% | 78.9% |
| 3475877 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.54 | 49.0 | 4.79e-01 | 96.4% | 94.0% |
| 4319383 | 12.1.1.34 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro38C2 | 0.52 | 31.0 | 3.66e-01 | 82.5% | 87.8% |
| 2027 | 12.3.1.17 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › RhgB_N | 0.52 | 39.0 | 3.15e-01 | 77.4% | 85.2% |
| 4278307 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.50 | 35.0 | 3.16e-01 | 70.8% | 80.5% |
| 4009854 | 274.1.1.1 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › Pilin | 0.50 | 35.0 | 3.71e-01 | 79.6% | 83.5% |
| 1241387 | 12.1.1.56 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › AmyB_C | 0.50 | 29.0 | 3.43e-01 | 76.6% | 86.4% |