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IMGVR_UViG_3300028635_000537-3300028635-Ga0302245_100490812
Arc-VirIMGVR_UViG_3300028635_000537-3300028635-Ga0302245_100490812
Identity
- Kingdom:
- archaea
Quality
84.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-70
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bt5A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.78 | 56.0 | 4.03e-01 | 83.1% | 29.1% |
| 3mdmA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.64 | 52.0 | 3.22e-01 | 100.0% | 58.2% |
| 4ofzA01 | 1.20.58.1800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 46.0 | 3.68e-01 | 83.1% | 95.6% |
| 1pmiA02 | 1.10.441.10 | Mainly Alpha › Orthogonal Bundle › Phosphomannose Isomerase; domain 2 › Phosphomannose Isomerase, domain 2 | 0.58 | 42.0 | 3.18e-01 | 76.3% | 34.6% |
| 2lckA00 | 1.50.40.10 | Mainly Alpha › Alpha/alpha barrel › Mitochondrial carrier fold › Mitochondrial carrier domain | 0.55 | 39.0 | 2.57e-01 | 78.0% | 34.7% |
| 4tllC01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 37.0 | 2.90e-01 | 76.3% | 84.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3415846 | 2002.1.1.33 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 | 0.67 | 58.0 | 3.47e-01 | 94.9% | 48.4% |
| 4677439 | 101.1.1.19 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SRP_SPB | 0.64 | 47.0 | 3.35e-01 | 78.0% | 29.0% |
| 4013983 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.61 | 55.0 | 3.18e-01 | 98.3% | 48.5% |
| 2068913 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.59 | 47.0 | 3.60e-01 | 88.1% | 41.3% |
| 3371462 | 376.1.3.25 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD-1st_NSD | 0.56 | 40.0 | 3.06e-01 | 78.0% | 50.0% |
| 3651790 | 109.4.1.1282 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 | 0.54 | 35.0 | 2.36e-01 | 76.3% | 15.6% |
| 4608552 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.50 | 41.0 | 2.85e-01 | 98.3% | 24.1% |