←Back to structures
IMGVR_UViG_3300028640_000124-3300028640-Ga0302237_10033497
Arc-VirIMGVR_UViG_3300028640_000124-3300028640-Ga0302237_10033497
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-129
Domain cluster:
rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 69.0 | 7.14e-01 | 97.9% | 97.8% |
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 69.0 | 7.12e-01 | 95.8% | 98.9% |
| 6o38A03 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 63.0 | 6.71e-01 | 89.6% | 98.8% |
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 69.0 | 7.06e-01 | 97.9% | 100.0% |
| 4dnyA00 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 65.0 | 6.18e-01 | 99.0% | 88.1% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.65 | 51.0 | 4.93e-01 | 97.9% | 76.4% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.59 | 50.0 | 4.61e-01 | 97.9% | 73.8% |
| 5fc9A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.58 | 43.0 | 4.34e-01 | 76.0% | 82.1% |
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.58 | 34.0 | 3.43e-01 | 72.9% | 58.9% |
| 1rfmA02 | 3.30.1370.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain | 0.56 | 45.0 | 3.57e-01 | 89.6% | 80.6% |
| 4f2eA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 42.0 | 4.23e-01 | 82.3% | 96.9% |
| 7rpyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 47.0 | 4.61e-01 | 97.9% | 87.4% |
| 3ty2A00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.53 | 44.0 | 3.35e-01 | 93.8% | 90.4% |
| 1l5xA00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.51 | 42.0 | 3.17e-01 | 94.8% | 92.7% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2581340 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.80 | 67.0 | 7.08e-01 | 95.8% | 97.7% |
| 2581339 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.79 | 70.0 | 7.15e-01 | 97.9% | 97.9% |
| 2581337 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.78 | 69.0 | 7.09e-01 | 95.8% | 97.8% |
| 2581338 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.77 | 70.0 | 7.06e-01 | 97.9% | 97.9% |
| 185692 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.70 | 65.0 | 6.18e-01 | 99.0% | 88.1% |
| 4562874 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.66 | 58.0 | 4.31e-01 | 99.0% | 60.8% |
| 4183596 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.66 | 58.0 | 4.26e-01 | 99.0% | 63.1% |
| 4663567 | 207.6.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Ice_nucleation | 0.64 | 50.0 | 3.07e-01 | 97.9% | 13.5% |
| 4098875 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.63 | 55.0 | 4.10e-01 | 99.0% | 62.3% |
| 4408592 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.63 | 54.0 | 4.01e-01 | 99.0% | 59.6% |
| 4518165 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.62 | 53.0 | 3.92e-01 | 97.9% | 59.3% |
| 4927573 | 3156.1.1.13 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cupredoxin_1 | 0.62 | 43.0 | 4.22e-01 | 71.9% | 74.3% |
| 4394964 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.60 | 51.0 | 3.88e-01 | 97.9% | 64.3% |
| 4963682 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.57 | 51.0 | 4.27e-01 | 100.0% | 67.3% |
| 3602516 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.55 | 45.0 | 3.39e-01 | 92.7% | 90.9% |
| 3325228 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.53 | 41.0 | 4.17e-01 | 84.4% | 95.9% |