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IMGVR_UViG_3300028663_000009-3300028663-Ga0309993_1305197
Arc-VirIMGVR_UViG_3300028663_000009-3300028663-Ga0309993_1305197
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-138_182-193
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e0zC03 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.73 | 56.0 | 6.28e-01 | 92.5% | 100.0% |
| 1ohgA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.73 | 60.0 | 6.44e-01 | 95.0% | 100.0% |
| 2bx2L02 | 3.40.1260.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › Ribonuclease E, catalytic domain | 0.60 | 38.0 | 4.01e-01 | 72.5% | 70.9% |
| 3rc2A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 36.0 | 3.09e-01 | 92.5% | 40.5% |
| 1u7iA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.55 | 29.0 | 3.72e-01 | 96.7% | 96.7% |
| 3dtyB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 34.0 | 3.02e-01 | 91.7% | 43.2% |
| 3euwA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 38.0 | 3.18e-01 | 76.7% | 73.2% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.51 | 45.0 | 3.13e-01 | 98.3% | 45.9% |
| 3ip3A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 36.0 | 3.00e-01 | 90.8% | 42.9% |
| 3e18A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 36.0 | 3.05e-01 | 74.2% | 61.8% |
| 4ihqA01 | 3.30.450.370 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 35.0 | 3.22e-01 | 70.8% | 95.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4241362 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.81 | 77.0 | 5.56e-01 | 99.2% | 53.6% |
| 3977525 | 2485.3.1.4 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_P2 | 0.76 | 71.0 | 5.06e-01 | 100.0% | 52.0% |
| 5083777 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.71 | 66.0 | 4.81e-01 | 99.2% | 54.3% |
| 3945441 | 3617.1.1.1 ↗ | a+b three layers › Thioredoxin-like domain in RNase E › Thioredoxin-like domain in RNase E › Thioredoxin-like domain in RNase E › RNase_E_G_Thio | 0.57 | 41.0 | 4.64e-01 | 75.8% | 100.0% |
| 4079005 | 298.4.1.6 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › T3SS_SCTL | 0.56 | 43.0 | 4.27e-01 | 92.5% | 78.4% |
| 4264868 | 3008.1.1.2 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DUF5915 | 0.55 | 37.0 | 4.04e-01 | 79.2% | 86.3% |
| 3289247 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.53 | 29.0 | 3.56e-01 | 95.0% | 88.6% |
| 3418079 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.52 | 39.0 | 3.10e-01 | 76.7% | 72.2% |
| 3338309 | 2003.1.2.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N | 0.52 | 43.0 | 3.20e-01 | 90.8% | 87.6% |
| 4468440 | 55.1.1.1 ↗ | beta barrels › Urease metallochperone UreE-N › Urease metallochperone UreE-N › Urease metallochperone UreE-N › UreE_N | 0.51 | 30.0 | 3.54e-01 | 99.2% | 90.7% |
| 4403478 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.50 | 37.0 | 3.01e-01 | 77.5% | 62.5% |