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IMGVR_UViG_3300028706_000088-3300028706-Ga0257115_100177916

Arc-Vir

IMGVR_UViG_3300028706_000088-3300028706-Ga0257115_100177916

Quality

89.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-87
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.65 51.0 4.72e-01 82.1% 73.1%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 52.0 4.14e-01 100.0% 44.7%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 40.0 3.68e-01 83.3% 49.5%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 40.0 3.82e-01 85.7% 56.8%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.62 53.0 4.39e-01 97.6% 97.4%
4ienA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 46.0 3.78e-01 79.8% 54.5%
2v1oB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 46.0 3.80e-01 81.0% 61.5%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 49.0 3.84e-01 97.6% 42.3%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 39.0 3.63e-01 83.3% 52.4%
2q2bA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 46.0 3.84e-01 81.0% 59.6%
1yliB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 46.0 3.86e-01 83.3% 58.1%
4hzoA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 45.0 3.05e-01 81.0% 37.5%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.59 52.0 4.21e-01 95.2% 90.3%
2gvhC01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 45.0 3.84e-01 82.1% 61.0%
5egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 45.0 3.60e-01 82.1% 50.3%
3e1eC00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 44.0 3.73e-01 81.0% 58.9%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 52.0 4.37e-01 98.8% 80.3%
1kiaA01 3.30.46.10 Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 0.58 45.0 4.53e-01 82.1% 98.8%
4k02A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 44.0 3.88e-01 83.3% 66.1%
3b7kC02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 43.0 3.98e-01 81.0% 77.3%
2gvhB02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 43.0 3.89e-01 82.1% 71.8%
1lo7A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 46.0 3.85e-01 100.0% 52.1%
1jyaB00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 38.0 3.41e-01 70.2% 76.0%
4f3lA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 40.0 3.62e-01 77.4% 81.1%
2vl6A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 35.0 3.20e-01 81.0% 47.3%
3gwiA00 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.55 45.0 3.75e-01 94.0% 99.4%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.55 48.0 3.47e-01 98.8% 96.4%
5ds1A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 38.0 3.77e-01 96.4% 67.4%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.54 50.0 3.74e-01 100.0% 46.9%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.54 36.0 3.78e-01 92.9% 73.4%
1bt9A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.54 46.0 3.11e-01 95.2% 97.4%
1g6q102 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.54 43.0 3.40e-01 88.1% 80.4%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.54 41.0 3.11e-01 100.0% 32.7%
2hngA00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.53 46.0 3.99e-01 92.9% 62.4%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 3.41e-01 77.4% 78.9%
2pzhA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 42.0 3.60e-01 97.6% 53.7%
1inyA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.53 44.0 2.86e-01 91.7% 92.8%
1fx3B00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.53 47.0 3.80e-01 95.2% 55.0%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.52 38.0 2.99e-01 77.4% 37.6%
6p3lA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 38.0 3.46e-01 78.6% 92.2%
2pr1A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 41.0 3.48e-01 90.5% 50.0%
3wa5B00 2.60.120.1690 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 3.44e-01 85.7% 54.8%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 44.0 3.70e-01 95.2% 64.5%
6iw2A01 2.60.98.10 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 0.50 37.0 3.23e-01 81.0% 49.6%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3266828 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.70 39.0 3.48e-01 79.8% 40.0%
4425267 5084.5.1.6 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprB 0.68 60.0 3.82e-01 97.6% 99.5%
4042627 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.67 59.0 4.69e-01 97.6% 96.4%
5027751 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.66 53.0 4.42e-01 89.3% 100.0%
3263883 5.1.4.32 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.64 51.0 3.15e-01 83.3% 87.0%
4537321 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.64 55.0 4.42e-01 100.0% 96.7%
2165137 5084.1.1.8 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › FHBP_C 0.64 53.0 4.66e-01 94.0% 91.6%
3634046 222.1.1.10 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.62 47.0 4.08e-01 81.0% 70.8%
3947513 5084.5.1.6 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprB 0.62 55.0 3.54e-01 98.8% 98.7%
4512746 5084.1.1.9 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagL 0.62 51.0 4.24e-01 94.0% 96.8%
4096596 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.61 45.0 2.87e-01 79.8% 15.2%
3693742 222.1.1.10 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.61 45.0 3.94e-01 79.8% 66.9%
4464084 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.60 50.0 3.82e-01 94.0% 100.0%
3389806 7502.1.1.2 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix 0.60 44.0 3.18e-01 77.4% 70.0%
3964096 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.60 51.0 4.12e-01 98.8% 89.1%
3557455 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.60 48.0 3.31e-01 88.1% 38.0%
4167075 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.59 45.0 3.70e-01 81.0% 62.7%
3876541 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.59 47.0 3.29e-01 88.1% 38.2%
4581478 283.2.1.16 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › MpPF1 0.59 46.0 4.26e-01 83.3% 93.3%
4356793 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.59 45.0 3.98e-01 83.3% 68.8%
3387730 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.59 44.0 3.84e-01 82.1% 64.4%
3226662 7502.1.1.2 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix 0.58 43.0 3.12e-01 77.4% 70.9%
4100963 222.1.1.17 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.58 44.0 3.71e-01 81.0% 63.4%
3326067 7502.1.1.2 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix 0.58 43.0 3.12e-01 78.6% 72.3%
3297150 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 4.64e-01 92.9% 78.0%
3701022 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 50.0 4.31e-01 92.9% 78.4%
4029391 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.57 44.0 3.60e-01 82.1% 56.3%
224845 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.57 44.0 3.88e-01 83.3% 66.1%
4292366 9.1.1.14 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.57 49.0 3.79e-01 94.0% 93.5%
3650282 243.5.1.8 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › DUF7074 0.57 40.0 4.00e-01 92.9% 69.7%
3967564 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.57 43.0 2.86e-01 82.1% 32.2%
3680278 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.57 44.0 3.48e-01 94.0% 42.8%
3278990 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 41.0 3.40e-01 84.5% 41.1%
3781358 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.57 43.0 3.30e-01 79.8% 74.3%
3617123 5.1.4.32 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.56 43.0 2.69e-01 82.1% 84.7%
3243860 331.15.1.4 a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 › FTH 0.56 44.0 3.52e-01 84.5% 44.5%
4397319 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.56 43.0 3.65e-01 82.1% 61.4%
5038819 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.56 51.0 3.60e-01 100.0% 70.2%
336675 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.56 42.0 3.63e-01 83.3% 64.8%
3256359 5.1.4.151 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BCAS3_WD40 0.56 39.0 2.41e-01 72.6% 86.0%
3495172 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 45.0 3.62e-01 88.1% 79.4%
3839687 5084.4.1.1 beta barrels › Outer membrane meander beta-barrels › Outer membrane phospholipase A (OMPLA) › Outer membrane phospholipase A (OMPLA) › PLA1 0.55 48.0 3.46e-01 98.8% 98.4%
3193570 2003.1.3.9 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FMO-like 0.55 46.0 2.85e-01 92.9% 82.0%
3965077 5084.4.1.1 beta barrels › Outer membrane meander beta-barrels › Outer membrane phospholipase A (OMPLA) › Outer membrane phospholipase A (OMPLA) › PLA1 0.55 48.0 3.40e-01 98.8% 94.1%
3897238 12.3.1.42 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 0.54 45.0 3.16e-01 89.3% 51.7%
3976052 5084.4.1.1 beta barrels › Outer membrane meander beta-barrels › Outer membrane phospholipase A (OMPLA) › Outer membrane phospholipase A (OMPLA) › PLA1 0.54 46.0 3.35e-01 97.6% 99.2%
3291030 223.1.1.40 a+b three layers › Profilin-like › sensor domains › sensor domains › Rv3651-like_middle 0.53 36.0 3.34e-01 70.2% 92.2%
3252114 223.2.1.56 a+b three layers › Profilin-like › profilin-like › profilin-like › Afi1, DENND11 0.53 45.0 3.57e-01 92.9% 58.8%
3445028 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 38.0 3.97e-01 79.8% 78.8%
3653398 331.9.1.10 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF28631 0.53 44.0 3.64e-01 92.9% 68.4%
167636 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.53 42.0 3.60e-01 97.6% 53.7%
3223629 331.15.1.0 a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 0.53 41.0 4.09e-01 84.5% 81.2%
2141377 5087.1.1.4 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › DUF481, Porin_OmpG 0.52 44.0 3.03e-01 90.5% 97.2%
5029448 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.52 44.0 3.54e-01 91.7% 65.0%
3694763 375.1.1.222 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF29994 0.52 45.0 3.94e-01 96.4% 64.6%
3760460 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 37.0 4.00e-01 73.8% 97.1%
5050158 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 41.0 3.34e-01 88.1% 62.9%
3244272 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.76e-01 86.9% 68.7%
3481772 331.9.1.4 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla 0.52 42.0 3.77e-01 90.5% 80.5%
3854465 283.2.1.8 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 0.52 45.0 3.98e-01 95.2% 70.0%
5021930 4312.1.1.22 a+b two layers › RelE-like › RelE-like › RelE-like › PF27370 0.52 39.0 3.73e-01 82.1% 85.0%
3841163 3860.1.1.0 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.51 40.0 3.93e-01 83.3% 92.2%
3867192 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.51 40.0 3.47e-01 84.5% 79.5%
3563416 5095.1.1.0 beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen 0.50 36.0 4.01e-01 86.9% 98.5%