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IMGVR_UViG_3300028706_000319-3300028706-Ga0257115_10060254
Arc-VirIMGVR_UViG_3300028706_000319-3300028706-Ga0257115_10060254
Identity
- Kingdom:
- archaea
Quality
89.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-101
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1o51A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 48.0 | 4.76e-01 | 73.8% | 100.0% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 47.0 | 4.64e-01 | 72.6% | 95.5% |
| 1vmbA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.67 | 46.0 | 4.33e-01 | 72.6% | 95.3% |
| 4y6iA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 46.0 | 4.30e-01 | 71.4% | 88.3% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 46.0 | 4.27e-01 | 72.6% | 86.8% |
| 1p1lA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 45.0 | 4.26e-01 | 71.4% | 88.2% |
| 1cqmA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.66 | 46.0 | 4.38e-01 | 72.6% | 99.0% |
| 4e98C00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 46.0 | 4.27e-01 | 72.6% | 87.6% |
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 46.0 | 4.20e-01 | 73.8% | 86.0% |
| 4do8A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.63 | 44.0 | 4.88e-01 | 94.0% | 93.9% |
| 2ca9A02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.62 | 44.0 | 4.34e-01 | 73.8% | 96.6% |
| 2bopA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 41.0 | 4.10e-01 | 70.2% | 100.0% |
| 1hq6B00 | 3.50.20.10 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B | 0.60 | 48.0 | 3.54e-01 | 88.1% | 54.4% |
| 3rgzA02 | 3.30.1490.310 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.58 | 39.0 | 4.43e-01 | 95.2% | 95.1% |
| 1q2lA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 46.0 | 3.28e-01 | 86.9% | 78.6% |
| 8b6jb01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 46.0 | 3.49e-01 | 88.1% | 92.7% |
| 2muoA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.56 | 45.0 | 4.61e-01 | 92.9% | 90.2% |
| 3bv8A00 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.56 | 40.0 | 4.07e-01 | 75.0% | 80.0% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.56 | 38.0 | 4.29e-01 | 71.4% | 96.7% |
| 3n6yA01 | 2.60.40.2390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 38.0 | 3.49e-01 | 71.4% | 57.1% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 38.0 | 4.09e-01 | 72.6% | 97.2% |
| 1hr6A01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.55 | 44.0 | 3.25e-01 | 85.7% | 88.3% |
| 4nn5C02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 34.0 | 3.23e-01 | 71.4% | 52.5% |
| 1egjA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 36.0 | 3.41e-01 | 73.8% | 57.4% |
| 5u8rA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 37.0 | 3.41e-01 | 98.8% | 55.6% |
| 4a18X01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 36.0 | 3.71e-01 | 70.2% | 83.5% |
| 2qcuA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.52 | 41.0 | 3.33e-01 | 84.5% | 60.2% |
| 4liqE05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.67e-01 | 100.0% | 66.0% |
| 2d73A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 42.0 | 3.78e-01 | 89.3% | 71.7% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.50 | 44.0 | 4.28e-01 | 97.6% | 98.9% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5022859 | 304.5.1.2 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF190 | 0.70 | 50.0 | 4.60e-01 | 73.8% | 98.1% |
| 3953977 | 304.5.1.2 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF190 | 0.69 | 48.0 | 4.24e-01 | 72.6% | 92.5% |
| 4353875 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.68 | 48.0 | 4.21e-01 | 73.8% | 81.6% |
| 4436655 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.68 | 47.0 | 4.12e-01 | 72.6% | 77.6% |
| 4466140 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.67 | 48.0 | 4.02e-01 | 73.8% | 71.4% |
| 4109316 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.67 | 47.0 | 4.25e-01 | 72.6% | 89.5% |
| 4935623 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.67 | 47.0 | 4.69e-01 | 72.6% | 97.6% |
| 4213698 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.67 | 47.0 | 4.33e-01 | 73.8% | 89.1% |
| 4342306 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.66 | 46.0 | 4.35e-01 | 72.6% | 96.0% |
| 4062697 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.65 | 45.0 | 3.72e-01 | 71.4% | 68.0% |
| 3701575 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.65 | 45.0 | 4.39e-01 | 71.4% | 94.4% |
| 4258266 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.64 | 45.0 | 4.06e-01 | 72.6% | 88.7% |
| 4506614 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.64 | 45.0 | 4.13e-01 | 72.6% | 88.1% |
| 4230916 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.64 | 44.0 | 4.03e-01 | 70.2% | 88.1% |
| 4109626 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.64 | 45.0 | 3.19e-01 | 73.8% | 27.1% |
| 4350044 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.64 | 45.0 | 4.24e-01 | 72.6% | 97.0% |
| 3989610 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 44.0 | 4.50e-01 | 72.6% | 100.0% |
| 4067121 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.63 | 43.0 | 4.31e-01 | 70.2% | 95.3% |
| 2557261 | 807.1.1.1 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD | 0.62 | 42.0 | 4.17e-01 | 72.6% | 65.2% |
| 3929121 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 43.0 | 3.84e-01 | 72.6% | 56.5% |
| 4073486 | 304.147.1.1 ↗ | a+b two layers › Alpha-beta plaits › Tetrahydrodipicolinate acetyltransferase N-terminal domain › Tetrahydrodipicolinate acetyltransferase N-terminal domain › DapH_N | 0.60 | 42.0 | 4.10e-01 | 71.4% | 74.4% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.60 | 41.0 | 4.51e-01 | 71.4% | 100.0% |
| 3492718 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.59 | 50.0 | 4.74e-01 | 94.0% | 90.0% |
| 3595368 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.58 | 45.0 | 3.28e-01 | 84.5% | 84.9% |
| 4358505 | 304.147.1.1 ↗ | a+b two layers › Alpha-beta plaits › Tetrahydrodipicolinate acetyltransferase N-terminal domain › Tetrahydrodipicolinate acetyltransferase N-terminal domain › DapH_N | 0.58 | 41.0 | 4.14e-01 | 73.8% | 80.0% |
| 3212599 | 11.1.1.936 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_nematode | 0.58 | 40.0 | 3.56e-01 | 72.6% | 66.4% |
| 3508212 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.58 | 40.0 | 4.31e-01 | 73.8% | 90.0% |
| 3673973 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.57 | 47.0 | 4.32e-01 | 94.0% | 99.1% |
| 3991293 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 39.0 | 3.42e-01 | 72.6% | 52.8% |
| 4888800 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 37.0 | 3.52e-01 | 72.6% | 58.7% |
| 3797628 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.52 | 43.0 | 3.75e-01 | 90.5% | 91.5% |
| 3896560 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.52 | 45.0 | 3.65e-01 | 100.0% | 72.4% |
| 3595363 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 36.0 | 3.53e-01 | 73.8% | 91.1% |