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IMGVR_UViG_3300028706_000373-3300028706-Ga0257115_100222019

Arc-Vir

IMGVR_UViG_3300028706_000373-3300028706-Ga0257115_100222019

Quality

83.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-55
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3krnA00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.70 52.0 3.48e-01 95.9% 21.3%
7wrgB01 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.60 50.0 2.98e-01 89.8% 39.0%
7mdhA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.59 44.0 2.97e-01 79.6% 87.3%
1rsgA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 52.0 3.28e-01 100.0% 81.6%
4hstA02 1.10.10.2580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Penicillin Acylase III; Chain A, Domain 2 0.57 38.0 3.56e-01 75.5% 53.8%
3b08E00 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.50 36.0 3.43e-01 75.5% 93.2%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2755218 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.63 54.0 3.47e-01 100.0% 22.3%
3666982 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.56 33.0 2.69e-01 95.9% 26.3%