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IMGVR_UViG_3300028797_000097-3300028797-Ga0265301_10000033113

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300028797_000097-3300028797-Ga0265301_10000033113 ↗
Kingdom:: archaea

Quality

71.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 81-149

PDB

Domain cluster: rep: Filtrate_w_scaffold_3_prodigal-single.1__X__X__00157__D1-61

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2yztA00	3.30.160.250	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.72	46.0	4.74e-01	72.5%	68.2%
1vwxS02	3.10.20.10	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.60	43.0	4.22e-01	95.7%	69.7%
2jxtA01	3.10.20.10	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.57	42.0	4.09e-01	95.7%	71.1%
7ejoB01	3.30.2260.10	Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary	0.57	47.0	4.50e-01	94.2%	96.4%
6s2wA01	3.30.2260.10	Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary	0.56	47.0	4.47e-01	94.2%	92.7%
1w5sA03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.55	38.0	3.38e-01	95.7%	48.5%
2iaiA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.54	34.0	3.51e-01	94.2%	66.2%
1i72A00	3.60.90.10	Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase	0.50	39.0	2.72e-01	85.5%	95.6%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3960156	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.83	52.0	6.17e-01	98.6%	91.7%
4196780	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.74	38.0	4.84e-01	95.7%	94.3%
4959989	386.1.1.65 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF1059	0.73	50.0	5.41e-01	98.6%	84.5%
3241716	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.66	45.0	4.76e-01	100.0%	81.7%
4519945	101.1.14.4 ↗	alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › PF31232	0.62	36.0	3.94e-01	100.0%	72.2%
5012895	3115.1.1.0 ↗	a+b two layers › GP2-like › RplX-like › RplX-like	0.61	43.0	4.85e-01	98.6%	92.7%
3634340	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.58	44.0	4.18e-01	98.6%	67.1%
3729467	70.3.1.1 ↗	beta barrels › beta-clip › SET domain-like › SET domain-like › SET	0.52	43.0	2.93e-01	88.4%	77.5%
3415060	6039.1.1.0 ↗	few secondary structure elements › CLIP domain › CLIP domain › CLIP domain	0.52	30.0	3.40e-01	98.6%	78.0%
3929908	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.52	37.0	2.92e-01	91.3%	32.7%
1657339	4019.1.1.3 ↗	alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase	0.51	42.0	3.79e-01	100.0%	94.6%
4885815	2005.1.1.0 ↗	a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains	0.51	31.0	3.41e-01	76.8%	76.4%

D2 medium residues 3-73

PDB

Domain cluster: rep: Filtrate_w_scaffold_3_prodigal-single.1__X__X__00157__D1-61

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00096.33 best	zf-C2H2	22.0	2.40e-04	33.8%	100.0%