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IMGVR_UViG_3300028797_000097-3300028797-Ga0265301_10000033182
Arc-VirIMGVR_UViG_3300028797_000097-3300028797-Ga0265301_10000033182
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-93
Domain cluster:
rep: pre3_saliva_scaffold_7_prodigal-single.1__X__X__00232__D3-81
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03477.22 best | ATP-cone | 77.1 | 1.80e-21 | 100.0% | 97.7% |
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fnaA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.77 | 43.0 | 4.62e-01 | 73.3% | 64.5% |
| 4p17A02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.72 | 47.0 | 4.41e-01 | 71.1% | 54.5% |
| 4oogC01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.71 | 53.0 | 4.33e-01 | 78.9% | 95.1% |
| 2l09A01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.70 | 40.0 | 5.14e-01 | 83.3% | 100.0% |
| 2z4sA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 42.0 | 4.63e-01 | 72.2% | 76.4% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.69 | 49.0 | 5.41e-01 | 87.8% | 100.0% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 42.0 | 4.42e-01 | 70.0% | 67.5% |
| 7r97A01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.68 | 51.0 | 4.36e-01 | 80.0% | 94.6% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.68 | 57.0 | 5.87e-01 | 100.0% | 96.5% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.68 | 55.0 | 5.11e-01 | 87.8% | 73.2% |
| 3smvA02 | 1.10.150.750 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.67 | 50.0 | 5.33e-01 | 84.4% | 93.5% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 43.0 | 4.81e-01 | 96.7% | 86.8% |
| 2mqaA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.66 | 56.0 | 5.04e-01 | 95.6% | 79.2% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.66 | 42.0 | 4.42e-01 | 73.3% | 71.1% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 42.0 | 4.73e-01 | 84.4% | 91.0% |
| 2kruA01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.63 | 37.0 | 4.56e-01 | 86.7% | 100.0% |
| 2c9kA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.63 | 54.0 | 4.04e-01 | 97.8% | 93.3% |
| 2hszA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 43.0 | 4.68e-01 | 85.6% | 86.7% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.62 | 48.0 | 5.11e-01 | 86.7% | 96.2% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.62 | 44.0 | 4.13e-01 | 74.4% | 83.0% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 30.0 | 2.87e-01 | 96.7% | 37.3% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 48.0 | 4.93e-01 | 84.4% | 90.5% |
| 1j78A05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.62 | 40.0 | 4.91e-01 | 75.6% | 100.0% |
| 2mpcA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.62 | 49.0 | 4.94e-01 | 85.6% | 97.8% |
| 7r8bB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 46.0 | 3.24e-01 | 80.0% | 28.4% |
| 1vt0k00 | 1.10.3230.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › P22 tail accessory factor (Gp4) | 0.61 | 47.0 | 4.09e-01 | 84.4% | 67.6% |
| 1v1gA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.61 | 52.0 | 4.07e-01 | 96.7% | 44.7% |
| 3hmfA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.60 | 50.0 | 4.69e-01 | 94.4% | 98.3% |
| 5oklA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.59 | 51.0 | 4.94e-01 | 94.4% | 100.0% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.57 | 46.0 | 4.66e-01 | 90.0% | 91.1% |
| 3vkhB07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 41.0 | 3.20e-01 | 85.6% | 36.0% |
| 3lfuA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 40.0 | 4.36e-01 | 86.7% | 97.1% |
| 3cymA03 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.56 | 42.0 | 4.29e-01 | 88.9% | 85.2% |
| 2idgA00 | 1.10.3480.10 | Mainly Alpha › Orthogonal Bundle › TorD-like › TorD-like | 0.55 | 42.0 | 3.57e-01 | 83.3% | 95.0% |
| 1sz2A02 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.55 | 43.0 | 3.34e-01 | 83.3% | 82.5% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 49.0 | 4.29e-01 | 98.9% | 65.7% |
| 1af7A01 | 1.10.155.10 | Mainly Alpha › Orthogonal Bundle › Chemotaxis Receptor Methyltransferase Cher; domain 1 › Chemotaxis receptor methyltransferase CheR, N-terminal domain | 0.55 | 37.0 | 3.90e-01 | 70.0% | 88.7% |
| 1ng6A01 | 1.10.1510.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain | 0.55 | 42.0 | 4.27e-01 | 83.3% | 100.0% |
| 1yt3A03 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.54 | 42.0 | 4.35e-01 | 100.0% | 93.9% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.53 | 41.0 | 3.67e-01 | 86.7% | 68.1% |
| 3ziuA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.52 | 37.0 | 2.76e-01 | 73.3% | 69.8% |
ECOD (81)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3989376 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.95 | 91.0 | 8.58e-01 | 100.0% | 87.6% |
| 4957090 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.95 | 92.0 | 8.97e-01 | 100.0% | 95.8% |
| 4211419 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.95 | 91.0 | 8.22e-01 | 100.0% | 86.1% |
| 4681348 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.94 | 91.0 | 8.71e-01 | 100.0% | 95.0% |
| 3980780 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.94 | 87.0 | 8.78e-01 | 100.0% | 96.7% |
| 3946182 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.94 | 87.0 | 8.77e-01 | 100.0% | 96.7% |
| 5066162 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.94 | 90.0 | 8.60e-01 | 98.9% | 89.0% |
| 4993731 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.94 | 90.0 | 8.47e-01 | 100.0% | 85.7% |
| 4934727 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.94 | 90.0 | 8.84e-01 | 100.0% | 95.8% |
| 4927666 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.94 | 90.0 | 8.60e-01 | 100.0% | 93.0% |
| 1878970 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.93 | 89.0 | 8.46e-01 | 100.0% | 92.2% |
| 4895331 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.93 | 80.0 | 8.05e-01 | 88.9% | 91.1% |
| 2141738 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.93 | 89.0 | 8.58e-01 | 100.0% | 93.9% |
| 4238441 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.93 | 79.0 | 8.36e-01 | 93.3% | 100.0% |
| 5034061 | 148.1.3.400 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Ribonuc_red_lgN | 0.92 | 88.0 | 6.65e-01 | 100.0% | 48.4% |
| 4096162 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.92 | 87.0 | 8.34e-01 | 98.9% | 99.0% |
| 4466734 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.92 | 82.0 | 7.47e-01 | 97.8% | 73.9% |
| 4160317 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.90 | 81.0 | 7.40e-01 | 100.0% | 74.8% |
| 4056578 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.90 | 80.0 | 7.44e-01 | 96.7% | 77.3% |
| 3278241 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.89 | 80.0 | 7.44e-01 | 96.7% | 77.3% |
| 5051773 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.89 | 80.0 | 8.02e-01 | 100.0% | 94.4% |
| 4588018 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.89 | 80.0 | 7.91e-01 | 100.0% | 90.5% |
| 4943010 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.89 | 80.0 | 8.26e-01 | 96.7% | 100.0% |
| 4388542 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.89 | 80.0 | 7.71e-01 | 100.0% | 86.0% |
| 4507907 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.88 | 77.0 | 7.97e-01 | 97.8% | 97.6% |
| 5057106 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.88 | 82.0 | 8.22e-01 | 98.9% | 97.8% |
| 4946727 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.88 | 72.0 | 7.64e-01 | 94.4% | 97.5% |
| 4932763 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.88 | 73.0 | 7.69e-01 | 94.4% | 97.5% |
| 4987113 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.88 | 70.0 | 7.63e-01 | 95.6% | 100.0% |
| 4996564 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.88 | 76.0 | 7.86e-01 | 100.0% | 97.6% |
| 5042563 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.87 | 76.0 | 7.79e-01 | 100.0% | 98.8% |
| 5037352 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.86 | 69.0 | 7.47e-01 | 88.9% | 100.0% |
| 4975484 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.86 | 75.0 | 5.04e-01 | 100.0% | 27.7% |
| 5044307 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.86 | 67.0 | 6.89e-01 | 86.7% | 85.9% |
| 4954174 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.86 | 72.0 | 7.28e-01 | 96.7% | 88.9% |
| 4257906 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.85 | 78.0 | 7.88e-01 | 100.0% | 97.8% |
| 4307412 | 181.1.1.27 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › ATP-cone | 0.84 | 73.0 | 7.54e-01 | 96.7% | 97.6% |
| 5043182 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.84 | 78.0 | 7.56e-01 | 100.0% | 98.0% |
| 5051504 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.84 | 65.0 | 7.06e-01 | 86.7% | 97.3% |
| 4949119 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.83 | 67.0 | 5.92e-01 | 84.4% | 91.2% |
| 3597638 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.83 | 69.0 | 7.33e-01 | 97.8% | 100.0% |
| 5004355 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.83 | 77.0 | 7.71e-01 | 98.9% | 100.0% |
| 4980139 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.83 | 77.0 | 7.44e-01 | 100.0% | 96.0% |
| 4953264 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.81 | 70.0 | 7.25e-01 | 96.7% | 98.8% |
| 3427839 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.81 | 70.0 | 7.16e-01 | 97.8% | 97.6% |
| 3455739 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.79 | 70.0 | 7.05e-01 | 100.0% | 95.6% |
| 3519328 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.79 | 46.0 | 4.56e-01 | 83.3% | 55.8% |
| 4089409 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 45.0 | 4.79e-01 | 83.3% | 65.0% |
| 4458447 | 148.1.3.21 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 | 0.77 | 44.0 | 4.91e-01 | 83.3% | 72.9% |
| 3879341 | 142.3.1.2 ↗ | alpha complex topology › Sigma2 domain-like › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Mitochondrial morphogenesis protein Sld7 C-terminal domain › MTBP_C | 0.73 | 50.0 | 5.26e-01 | 71.1% | 87.5% |
| 3604096 | 2004.1.1.66 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 | 0.72 | 43.0 | 4.55e-01 | 75.6% | 67.5% |
| 5049997 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 64.0 | 5.27e-01 | 97.8% | 75.5% |
| 3963295 | 148.1.3.238 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF815 | 0.70 | 42.0 | 5.02e-01 | 82.2% | 98.2% |
| 2884237 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 46.0 | 4.79e-01 | 71.1% | 74.1% |
| 4032062 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.70 | 49.0 | 4.60e-01 | 73.3% | 82.7% |
| 5037154 | 4953.1.1.39 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › LPG_synthase_TM | 0.68 | 57.0 | 5.83e-01 | 88.9% | 100.0% |
| 3385104 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 42.0 | 4.44e-01 | 72.2% | 70.0% |
| 3838403 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.68 | 42.0 | 4.46e-01 | 71.1% | 70.0% |
| 4246144 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 44.0 | 4.60e-01 | 84.4% | 73.8% |
| 3586538 | 148.1.3.35 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TOR1A_C | 0.67 | 47.0 | 4.69e-01 | 76.7% | 70.2% |
| 4234479 | 3694.1.1.2 ↗ | alpha bundles › Tail specific protease helical domain › Tail specific protease helical domain › Tail specific protease helical domain › Tricorn_C1 | 0.66 | 49.0 | 5.06e-01 | 91.1% | 84.7% |
| 3470194 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.66 | 46.0 | 4.39e-01 | 72.2% | 64.8% |
| 3571483 | 60.1.1.16 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › MTBP_C | 0.66 | 49.0 | 5.15e-01 | 82.2% | 88.6% |
| 3475867 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.65 | 46.0 | 4.89e-01 | 73.3% | 92.0% |
| 3060772 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 44.0 | 4.19e-01 | 71.1% | 59.3% |
| 4059363 | 142.3.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Sld7_C | 0.64 | 50.0 | 5.04e-01 | 83.3% | 85.6% |
| 5075956 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.64 | 56.0 | 4.17e-01 | 98.9% | 52.8% |
| 3924746 | 378.1.1.4 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › MH1 | 0.62 | 46.0 | 4.04e-01 | 78.9% | 91.3% |
| 3802087 | 108.1.1.99 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 | 0.62 | 53.0 | 4.10e-01 | 96.7% | 43.1% |
| 3171757 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.61 | 48.0 | 4.67e-01 | 100.0% | 76.0% |
| 3593739 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 52.0 | 4.69e-01 | 95.6% | 71.2% |
| 4982207 | 5076.2.1.18 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF6159 | 0.60 | 48.0 | 3.55e-01 | 85.6% | 71.3% |
| 3311440 | 109.4.1.1293 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 | 0.57 | 41.0 | 3.09e-01 | 91.1% | 32.7% |
| 3354084 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.56 | 41.0 | 3.87e-01 | 91.1% | 64.8% |
| 224060 | 3631.1.1.0 ↗ | 0.55 | 29.0 | 3.13e-01 | 95.6% | 54.4% | |
| 4879388 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.55 | 43.0 | 4.43e-01 | 87.8% | 86.2% |
| 3396226 | 212.1.1.3 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N | 0.53 | 46.0 | 3.49e-01 | 100.0% | 70.0% |
| 3487282 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.52 | 45.0 | 3.44e-01 | 95.6% | 67.1% |
| 4840 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.52 | 46.0 | 3.99e-01 | 98.9% | 70.0% |
| 5054584 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.52 | 46.0 | 3.61e-01 | 98.9% | 53.2% |
| 3364057 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.50 | 40.0 | 2.82e-01 | 93.3% | 29.4% |
D2
high
residues 417-480
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 47.0 | 3.82e-01 | 75.0% | 86.8% |
| 3hrpA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 40.0 | 3.55e-01 | 95.3% | 46.3% |
| 4dk0A01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.60 | 38.0 | 3.69e-01 | 93.8% | 58.6% |
| 3f95B00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.56 | 41.0 | 3.15e-01 | 82.8% | 89.0% |
| 2imzA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.56 | 43.0 | 3.45e-01 | 89.1% | 92.3% |
| 3u5wA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 45.0 | 3.66e-01 | 92.2% | 93.7% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 43.0 | 3.49e-01 | 89.1% | 93.3% |
| 3cp3A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 43.0 | 3.57e-01 | 92.2% | 92.9% |
| 2iabA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 44.0 | 3.51e-01 | 95.3% | 89.5% |
| 5yjlD01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 42.0 | 3.34e-01 | 89.1% | 76.8% |
| 2htiA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 42.0 | 3.47e-01 | 92.2% | 94.4% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 43.0 | 3.54e-01 | 93.8% | 97.6% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 41.0 | 3.35e-01 | 93.8% | 95.8% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.33e-01 | 100.0% | 52.1% |
| 3ujzA03 | 2.60.20.40 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › | 0.51 | 36.0 | 3.22e-01 | 75.0% | 95.0% |
| 2o6cA00 | 2.60.40.2480 | Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type | 0.51 | 35.0 | 2.80e-01 | 75.0% | 92.4% |
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 43.0 | 4.20e-01 | 100.0% | 95.9% |
| 2arzA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 41.0 | 3.26e-01 | 95.3% | 92.7% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 40.0 | 3.35e-01 | 92.2% | 95.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946540 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.62 | 52.0 | 3.53e-01 | 96.9% | 37.7% |
| 5062140 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.61 | 44.0 | 3.77e-01 | 78.1% | 95.2% |
| 3619619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 38.0 | 3.72e-01 | 82.8% | 67.1% |
| 3283478 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.54 | 43.0 | 3.39e-01 | 92.2% | 88.0% |
| 4977763 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.53 | 43.0 | 3.33e-01 | 92.2% | 93.5% |
| 4958989 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.53 | 43.0 | 3.32e-01 | 92.2% | 92.9% |
| 3740221 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.52 | 39.0 | 3.07e-01 | 85.9% | 58.1% |
| 3574441 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.06e-01 | 98.4% | 40.8% |
| 3312418 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 37.0 | 2.47e-01 | 79.7% | 36.9% |
| 4958339 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.51 | 36.0 | 3.11e-01 | 76.6% | 58.2% |
D3
medium
residues 94-171
Domain cluster:
rep: pig_ID_3640_F65_scaffold_23_curated_prodigal-single.1__X__X__00063__D112-182
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13597.12 best | NRDD | 29.9 | 3.50e-07 | 65.4% | 8.9% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5svlA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.66 | 47.0 | 5.08e-01 | 76.9% | 85.3% |
| 3h0gA05 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.66 | 47.0 | 3.80e-01 | 78.2% | 39.7% |
| 3gi8C00 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.62 | 55.0 | 3.46e-01 | 100.0% | 66.4% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 35.0 | 3.60e-01 | 71.8% | 56.4% |
| 1j78A05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.60 | 42.0 | 4.63e-01 | 96.2% | 93.3% |
| 2oifB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 51.0 | 4.14e-01 | 96.2% | 89.4% |
| 2zs0A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 49.0 | 4.14e-01 | 96.2% | 59.3% |
| 1bvp101 | 1.10.250.10 | Mainly Alpha › Orthogonal Bundle › Bluetongue Virus 10, subunit 1; domain 1 › Bluetongue Virus 10, subunit 1, domain 1 | 0.51 | 44.0 | 3.82e-01 | 96.2% | 74.2% |
| 1pulA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 37.0 | 3.44e-01 | 79.5% | 98.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3100301 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.81 | 74.0 | 4.25e-01 | 97.4% | 11.8% |
| 5053026 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.81 | 64.0 | 3.82e-01 | 89.7% | 12.6% |
| 5005255 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 52.0 | 3.71e-01 | 100.0% | 67.1% |
D4
medium
residues 186-206_233-341
Domain cluster:
rep: SRR1747018_scaffold_15_prodigal-single.1__X__X__00231__D198-212_231-344
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13597.12 best | NRDD | 40.0 | 3.00e-10 | 83.9% | 9.6% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.63 | 36.0 | 4.14e-01 | 74.6% | 76.3% |
| 4it4A02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.62 | 35.0 | 4.12e-01 | 70.8% | 79.1% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.62 | 29.0 | 3.58e-01 | 73.8% | 68.2% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.61 | 37.0 | 4.11e-01 | 99.2% | 77.2% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.60 | 33.0 | 3.94e-01 | 76.2% | 79.3% |
| 1vctA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.60 | 38.0 | 4.15e-01 | 94.6% | 76.1% |
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.60 | 32.0 | 3.88e-01 | 76.9% | 80.5% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.59 | 28.0 | 3.77e-01 | 98.5% | 85.3% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 36.0 | 4.46e-01 | 83.8% | 100.0% |
| 2auaA02 | 1.10.3800.10 | Mainly Alpha › Orthogonal Bundle › ADP-ribosylation fold › ADP-ribosylation domain | 0.56 | 31.0 | 3.70e-01 | 76.9% | 78.0% |
| 2vixA02 | 1.10.150.630 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.55 | 36.0 | 4.18e-01 | 80.0% | 95.5% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 34.0 | 3.88e-01 | 71.5% | 84.4% |
| 6p73A02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 36.0 | 3.50e-01 | 96.2% | 60.1% |
| 4an8A02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.54 | 38.0 | 3.91e-01 | 99.2% | 76.2% |
| 4gzrB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.53 | 30.0 | 3.75e-01 | 77.7% | 92.2% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.53 | 38.0 | 4.04e-01 | 95.4% | 84.5% |
| 2co9A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.53 | 33.0 | 3.74e-01 | 79.2% | 81.4% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.53 | 38.0 | 4.07e-01 | 94.6% | 87.3% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 40.0 | 4.25e-01 | 80.0% | 98.2% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.52 | 29.0 | 3.66e-01 | 85.4% | 89.9% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.51 | 29.0 | 3.62e-01 | 71.5% | 90.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4947260 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.71 | 31.0 | 3.93e-01 | 77.7% | 67.5% |
| 3432081 | 142.3.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Mitochondrial morphogenesis protein Sld7 C-terminal domain | 0.68 | 27.0 | 3.73e-01 | 88.5% | 71.4% |
| 4995297 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.60 | 38.0 | 4.00e-01 | 94.6% | 70.4% |
| 3770218 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.59 | 34.0 | 3.76e-01 | 73.1% | 69.9% |
| 3488983 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.59 | 33.0 | 3.60e-01 | 83.8% | 64.8% |
| 3620092 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.55 | 33.0 | 3.33e-01 | 87.7% | 57.0% |
| 3415351 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.54 | 34.0 | 3.57e-01 | 81.5% | 69.6% |
| 3713381 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.53 | 36.0 | 4.23e-01 | 80.8% | 95.8% |
| 4038742 | 150.5.1.53 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE | 0.53 | 31.0 | 3.55e-01 | 70.8% | 77.9% |
| 5036394 | 101.1.9.152 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_28 | 0.52 | 41.0 | 3.77e-01 | 84.6% | 63.5% |
| 3787103 | 1203.1.2.0 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 | 0.51 | 40.0 | 3.98e-01 | 93.1% | 77.9% |
| 3620454 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.51 | 31.0 | 2.98e-01 | 86.2% | 52.7% |
| 3388557 | 106.1.1.9 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › FIBP | 0.50 | 39.0 | 3.44e-01 | 81.5% | 62.4% |
D5
medium
residues 506-562_593-711
Domain cluster:
rep: IMGVR_UViG_2061766007_001514-2061766007-_HiSeq_18404430__D92-183_217-240
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13597.12 best | NRDD | 107.6 | 1.00e-30 | 100.0% | 33.2% |
D6
medium
residues 724-819
Domain cluster:
rep: BC_09192017_0_5m_scaffold_0_prodigal-single.1__X__X__00126__D230-350
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13597.12 best | NRDD | 67.5 | 1.40e-18 | 100.0% | 15.6% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6d6wA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 46.0 | 3.36e-01 | 100.0% | 47.2% |
| 6d92A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 46.0 | 3.43e-01 | 100.0% | 83.2% |
| 2bmbA02 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.50 | 45.0 | 3.16e-01 | 100.0% | 80.1% |
| 1onwA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.50 | 43.0 | 3.25e-01 | 100.0% | 74.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4961008 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.86 | 81.0 | 4.80e-01 | 100.0% | 16.0% |
| 4934728 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.84 | 71.0 | 4.26e-01 | 100.0% | 14.5% |
| 5004456 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.83 | 71.0 | 4.19e-01 | 100.0% | 13.5% |
| 5031517 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.82 | 71.0 | 4.29e-01 | 100.0% | 15.8% |
| 3100301 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.82 | 72.0 | 4.24e-01 | 100.0% | 13.8% |
| 4982642 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.80 | 71.0 | 4.30e-01 | 100.0% | 16.4% |
| 5079907 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.79 | 68.0 | 4.08e-01 | 100.0% | 14.8% |
| 3978395 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.78 | 73.0 | 4.32e-01 | 100.0% | 15.6% |
| 5074578 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.77 | 67.0 | 4.03e-01 | 100.0% | 15.1% |
| 4970624 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.68 | 58.0 | 3.62e-01 | 100.0% | 16.6% |
| 3218188 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.59 | 37.0 | 3.41e-01 | 100.0% | 48.0% |
| 4379983 | 2003.1.10.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Dala_Dala_lig_N | 0.55 | 35.0 | 3.74e-01 | 97.9% | 75.0% |
| 3907140 | 9002.1.1.2 ↗ | a/b three-layered sandwiches › ATP-grasp_6 › ATP-grasp_6 › ATP-grasp_6 › PPIP5K2_N | 0.54 | 31.0 | 3.70e-01 | 96.9% | 94.5% |
| 3188709 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.53 | 35.0 | 3.01e-01 | 95.8% | 40.6% |
| 4959441 | 2005.1.1.15 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase | 0.52 | 43.0 | 3.11e-01 | 90.6% | 84.0% |