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IMGVR_UViG_3300028797_000097-3300028797-Ga0265301_1000003372
Arc-VirIMGVR_UViG_3300028797_000097-3300028797-Ga0265301_1000003372
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 20-178
Domain cluster:
rep: pre1_saliva_scaffold_4_prodigal-single.1__X__X__00177__D61-102_106-112_123-254
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.76 | 58.0 | 5.81e-01 | 100.0% | 77.8% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.75 | 38.0 | 4.51e-01 | 100.0% | 69.4% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.72 | 40.0 | 4.54e-01 | 100.0% | 70.2% |
| 4feuF01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.69 | 30.0 | 4.29e-01 | 99.4% | 87.7% |
| 5iqaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.68 | 32.0 | 4.07e-01 | 99.4% | 75.6% |
| 5qinA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 33.0 | 4.32e-01 | 100.0% | 85.9% |
| 3ne5C02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.66 | 35.0 | 4.20e-01 | 92.5% | 77.5% |
| 4r78A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 29.0 | 3.64e-01 | 100.0% | 66.7% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.64 | 36.0 | 4.41e-01 | 98.7% | 85.9% |
| 4e5xG00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 21.0 | 2.65e-01 | 86.8% | 47.5% |
| 2jvaA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 30.0 | 3.50e-01 | 100.0% | 68.5% |
| 2kvoA01 | 2.40.30.220 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 | 0.57 | 31.0 | 3.63e-01 | 100.0% | 76.9% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 28.0 | 3.32e-01 | 94.3% | 72.2% |
| 3fgtA01 | 2.10.70.60 | Mainly Beta › Ribbon › Complement Module; domain 1 › Phospholipase B-like, domain 1 | 0.53 | 19.0 | 3.11e-01 | 83.6% | 89.1% |
| 1zc3B00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 27.0 | 3.18e-01 | 93.7% | 69.7% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 29.0 | 3.19e-01 | 98.7% | 64.1% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.50 | 17.0 | 2.55e-01 | 100.0% | 65.5% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995819 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.83 | 71.0 | 7.31e-01 | 100.0% | 94.0% |
| 4995820 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.83 | 63.0 | 6.93e-01 | 100.0% | 94.6% |
| 2101663 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.83 | 70.0 | 6.95e-01 | 100.0% | 85.3% |
| 3581358 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.81 | 65.0 | 6.66e-01 | 100.0% | 85.8% |
| 2471641 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.80 | 60.0 | 6.25e-01 | 100.0% | 82.6% |
| 4140243 | 1.1.5.82 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001 | 0.80 | 51.0 | 5.92e-01 | 100.0% | 87.8% |
| 5003885 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.80 | 60.0 | 6.32e-01 | 100.0% | 85.5% |
| 2471637 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.79 | 62.0 | 6.47e-01 | 100.0% | 87.2% |
| 2832217 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.79 | 60.0 | 6.37e-01 | 100.0% | 88.0% |
| 2832216 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.77 | 63.0 | 6.45e-01 | 100.0% | 88.9% |
| 4873215 | 1.1.13.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 | 0.76 | 56.0 | 5.94e-01 | 100.0% | 85.0% |
| 3942090 | 1.1.5.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube | 0.75 | 56.0 | 5.60e-01 | 100.0% | 74.5% |
| 3096576 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.74 | 59.0 | 5.96e-01 | 100.0% | 83.0% |
| 4379249 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.74 | 41.0 | 4.59e-01 | 100.0% | 68.8% |
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 53.0 | 5.79e-01 | 100.0% | 91.5% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.72 | 56.0 | 5.58e-01 | 100.0% | 78.0% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 52.0 | 5.78e-01 | 100.0% | 95.2% |
| 3976188 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.71 | 54.0 | 5.36e-01 | 100.0% | 75.2% |
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.71 | 54.0 | 5.40e-01 | 100.0% | 75.9% |
| 3653406 | 304.12.1.9 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › DUF7049 | 0.70 | 32.0 | 4.80e-01 | 84.3% | 100.0% |
| 4034209 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.69 | 55.0 | 5.89e-01 | 100.0% | 98.5% |
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.68 | 50.0 | 5.42e-01 | 100.0% | 91.5% |
| 3943681 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.62 | 53.0 | 5.48e-01 | 100.0% | 95.3% |
| 4971337 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.61 | 27.0 | 3.60e-01 | 100.0% | 75.3% |
| 4024953 | 811.1.1.1 ↗ | a+b complex topology › Cell cycle regulatory proteins › Cell cycle regulatory proteins › Cell cycle regulatory proteins › CKS | 0.60 | 30.0 | 3.95e-01 | 100.0% | 88.2% |
| 5032935 | 304.8.1.112 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › MazE_antitoxin | 0.59 | 28.0 | 3.04e-01 | 90.6% | 50.4% |
| 3580020 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 53.0 | 4.93e-01 | 100.0% | 80.5% |
| 4025700 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 30.0 | 3.45e-01 | 89.9% | 73.6% |
| 3915626 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 28.0 | 3.39e-01 | 95.0% | 82.1% |
| 3289437 | 881.1.1.15 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 | 0.51 | 29.0 | 3.14e-01 | 85.5% | 64.6% |
| 5077618 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.51 | 30.0 | 3.36e-01 | 90.6% | 72.8% |
| 4972140 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 30.0 | 3.15e-01 | 96.2% | 60.7% |
| 5077058 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.51 | 29.0 | 3.27e-01 | 89.3% | 71.2% |