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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_10000151
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_10000151
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-110
Domain cluster:
rep: OP172706.1__WAX08791.1__BS162P1_00012__00012__D5-100
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 25.0 | 3.33e-01 | 84.9% | 72.2% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 30.0 | 3.69e-01 | 84.9% | 94.7% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 26.0 | 3.21e-01 | 78.3% | 81.4% |
| 2v7fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 37.0 | 3.40e-01 | 92.5% | 58.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3494982 | 101.1.2.466 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C | 0.63 | 40.0 | 4.76e-01 | 99.1% | 95.7% |
| 3503755 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 34.0 | 4.34e-01 | 83.0% | 94.9% |
| 3700891 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.57 | 29.0 | 3.19e-01 | 84.0% | 57.3% |
| 3389045 | 379.1.1.1 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 | 0.54 | 21.0 | 2.86e-01 | 71.7% | 68.0% |
| 3592283 | 180.1.1.0 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase | 0.53 | 33.0 | 2.53e-01 | 83.0% | 26.1% |
| 3266479 | 859.1.1.4 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › ATG13 | 0.53 | 37.0 | 3.13e-01 | 72.6% | 88.9% |
| 4451053 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.53 | 21.0 | 3.02e-01 | 79.2% | 76.0% |
| 1145762 | 101.1.1.40 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Recombinase | 0.53 | 41.0 | 3.93e-01 | 85.8% | 93.1% |
| 5003454 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.52 | 37.0 | 2.80e-01 | 75.5% | 63.7% |
| 3679768 | 101.1.2.454 ↗ | alpha arrays › HTH › HTH › winged helix domain › FAM91_N | 0.51 | 44.0 | 3.97e-01 | 98.1% | 96.0% |
| 3597065 | 859.1.1.0 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 | 0.50 | 35.0 | 3.07e-01 | 72.6% | 93.1% |