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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015118
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015118
Identity
- Kingdom:
- archaea
Quality
91.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-134
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2h6bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 39.0 | 4.35e-01 | 100.0% | 76.0% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 39.0 | 4.65e-01 | 100.0% | 90.2% |
| 2xkoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 37.0 | 4.23e-01 | 100.0% | 77.7% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 36.0 | 4.42e-01 | 99.2% | 90.0% |
| 3pubA01 | 1.10.10.2400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain | 0.56 | 33.0 | 4.05e-01 | 74.8% | 98.6% |
| 3vadA01 | 1.20.140.20 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain | 0.54 | 37.0 | 3.45e-01 | 70.1% | 97.4% |
| 5m9dA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 43.0 | 4.26e-01 | 90.6% | 80.4% |
| 2bgcA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 4.35e-01 | 100.0% | 99.0% |
| 4gp6A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 42.0 | 3.83e-01 | 89.0% | 86.0% |
| 6uqjA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 42.0 | 3.13e-01 | 92.1% | 57.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3286774 | 101.1.7.0 ↗ | alpha arrays › HTH › HTH › Methylated DNA-protein cysteine methyltransferase-C | 0.82 | 68.0 | 7.26e-01 | 99.2% | 100.0% |
| 3285759 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.70 | 43.0 | 4.77e-01 | 100.0% | 78.0% |
| None | — | 0.65 | 39.0 | 4.66e-01 | 100.0% | 92.5% | |
| None | — | 0.64 | 38.0 | 4.44e-01 | 100.0% | 85.9% | |
| 4241597 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 36.0 | 4.56e-01 | 96.9% | 100.0% |
| 3739697 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.56 | 41.0 | 3.00e-01 | 76.4% | 79.7% |
| 5041964 | 4143.1.1.6 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_THUMP_arc | 0.54 | 37.0 | 3.25e-01 | 87.4% | 46.3% |
| 3610948 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 38.0 | 3.79e-01 | 89.0% | 70.0% |
| 3840735 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 39.0 | 3.67e-01 | 76.4% | 65.2% |
| 3827215 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 44.0 | 4.21e-01 | 92.1% | 94.7% |
| 3435051 | 109.52.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › FRIGIDA flowering-time regulator › FRIGIDA flowering-time regulator | 0.52 | 42.0 | 3.18e-01 | 90.6% | 34.7% |
| 4933724 | 604.39.1.16 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ThiW | 0.52 | 43.0 | 3.88e-01 | 94.5% | 81.6% |
| 3790902 | 109.4.1.559 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tuberin | 0.51 | 41.0 | 3.40e-01 | 85.0% | 71.6% |