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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015145
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015145
Identity
- Kingdom:
- archaea
Quality
95.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-138
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pq7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.83 | 73.0 | 6.65e-01 | 100.0% | 72.3% |
| 3dtoA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.79 | 51.0 | 6.17e-01 | 82.2% | 98.9% |
| 2pjqA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.79 | 52.0 | 6.27e-01 | 77.0% | 100.0% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.77 | 53.0 | 6.23e-01 | 81.5% | 99.0% |
| 3b9qA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.68 | 35.0 | 4.29e-01 | 99.3% | 75.3% |
| 2dqbB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.68 | 60.0 | 4.39e-01 | 94.8% | 41.0% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.62 | 44.0 | 4.76e-01 | 100.0% | 90.0% |
| 1d2tA00 | 1.20.144.10 | Mainly Alpha › Up-down Bundle › Vanadium-containing Chloroperoxidase; domain 1 › Phosphatidic acid phosphatase type 2/haloperoxidase | 0.56 | 47.0 | 4.02e-01 | 91.9% | 70.3% |
| 1ddbA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.55 | 35.0 | 3.09e-01 | 71.1% | 43.1% |
| 1t6jA03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.55 | 36.0 | 4.05e-01 | 100.0% | 87.4% |
| 1dlwA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 40.0 | 4.31e-01 | 85.2% | 90.5% |
| 2yxlA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.54 | 45.0 | 4.41e-01 | 98.5% | 81.6% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.53 | 45.0 | 4.53e-01 | 100.0% | 87.9% |
| 6bmeA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 42.0 | 4.35e-01 | 84.4% | 92.9% |
| 2oc5A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 47.0 | 4.08e-01 | 100.0% | 67.0% |
| 3aq5A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 41.0 | 4.36e-01 | 85.2% | 94.9% |
| 5ux2B01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 47.0 | 4.06e-01 | 100.0% | 68.7% |
| 1x9fC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 40.0 | 3.94e-01 | 83.0% | 91.9% |
| 1urvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 39.0 | 3.82e-01 | 82.2% | 93.5% |
| 5llmA00 | 1.10.3860.10 | Mainly Alpha › Orthogonal Bundle › Proton glutamate symport protein › Sodium:dicarboxylate symporter | 0.51 | 40.0 | 2.92e-01 | 85.2% | 95.0% |
| 2d2mD00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 39.0 | 3.89e-01 | 83.0% | 93.1% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932569 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.96 | 90.0 | 7.53e-01 | 100.0% | 62.9% |
| 3968184 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.96 | 89.0 | 7.46e-01 | 100.0% | 62.4% |
| 3291508 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.94 | 86.0 | 7.06e-01 | 100.0% | 58.6% |
| 3256767 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.93 | 90.0 | 7.37e-01 | 100.0% | 63.3% |
| 3503763 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.91 | 85.0 | 7.05e-01 | 100.0% | 61.4% |
| 3934120 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.88 | 84.0 | 6.95e-01 | 100.0% | 61.9% |
| 4984123 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.88 | 71.0 | 6.29e-01 | 97.8% | 62.2% |
| 5077860 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.84 | 72.0 | 6.24e-01 | 97.8% | 62.1% |
| 4984229 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.83 | 74.0 | 6.11e-01 | 99.3% | 56.9% |
| 5052181 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.83 | 70.0 | 5.95e-01 | 98.5% | 58.0% |
| 4941136 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.83 | 69.0 | 6.09e-01 | 88.1% | 63.2% |
| 5073757 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.82 | 71.0 | 6.07e-01 | 97.8% | 60.0% |
| 5054373 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.82 | 71.0 | 6.26e-01 | 97.0% | 65.1% |
| 4945175 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.82 | 74.0 | 6.32e-01 | 95.6% | 64.4% |
| 5058334 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.81 | 72.0 | 5.98e-01 | 94.8% | 58.1% |
| 5062324 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.80 | 72.0 | 6.16e-01 | 96.3% | 63.5% |
| 5073439 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.79 | 72.0 | 6.17e-01 | 98.5% | 64.0% |
| 3943504 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.79 | 71.0 | 5.78e-01 | 98.5% | 55.2% |
| 4963661 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.77 | 71.0 | 6.02e-01 | 97.0% | 67.3% |
| 3989681 | 304.20.1.5 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f | 0.77 | 62.0 | 5.12e-01 | 84.4% | 53.3% |
| 4529521 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.76 | 62.0 | 5.01e-01 | 84.4% | 48.3% |
| 4324950 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.76 | 62.0 | 4.91e-01 | 84.4% | 48.4% |
| 3291613 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.76 | 65.0 | 5.25e-01 | 96.3% | 49.8% |
| 3986327 | 140.1.1.23 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA_synt_2f | 0.75 | 61.0 | 5.26e-01 | 84.4% | 58.5% |
| 4085616 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.75 | 61.0 | 4.80e-01 | 84.4% | 45.8% |
| 3838868 | 140.1.1.23 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA_synt_2f | 0.75 | 61.0 | 5.20e-01 | 84.4% | 60.5% |
| 3285930 | 131.2.1.7 ↗ | alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › HD | 0.75 | 71.0 | 5.55e-01 | 100.0% | 78.5% |
| 4511845 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.74 | 60.0 | 5.10e-01 | 84.4% | 54.3% |
| 3970246 | 304.20.1.5 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f | 0.74 | 60.0 | 5.28e-01 | 84.4% | 61.6% |
| 4600410 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.74 | 60.0 | 4.84e-01 | 84.4% | 48.1% |
| 3284159 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.74 | 64.0 | 5.82e-01 | 100.0% | 70.9% |
| 3971047 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.68 | 58.0 | 5.22e-01 | 91.1% | 72.8% |
| 4123252 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.67 | 54.0 | 4.45e-01 | 86.7% | 49.8% |
| 3386171 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.66 | 53.0 | 4.36e-01 | 84.4% | 48.8% |
| 4651798 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.66 | 53.0 | 4.31e-01 | 86.7% | 46.9% |
| 3407641 | 106.1.1.8 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › HisK-N-like | 0.64 | 41.0 | 3.92e-01 | 74.1% | 54.8% |
| 4984588 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.62 | 52.0 | 4.40e-01 | 88.9% | 70.2% |
| 4025031 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.60 | 45.0 | 4.01e-01 | 100.0% | 55.8% |
| 4990634 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.57 | 35.0 | 4.27e-01 | 95.6% | 93.3% |
| 4940127 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.54 | 41.0 | 4.36e-01 | 91.9% | 92.5% |
| 4068294 | 150.1.2.9 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ald_deCOase | 0.53 | 48.0 | 4.03e-01 | 100.0% | 63.0% |
| 4930376 | 3896.1.1.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase | 0.53 | 47.0 | 4.10e-01 | 96.3% | 90.0% |
| 4999927 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.52 | 37.0 | 4.06e-01 | 95.6% | 94.3% |
D2
high
residues 142-211
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vbbE01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.82 | 55.0 | 4.54e-01 | 70.0% | 52.9% |
| 1zbtA01 | 6.10.140.1950 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 49.0 | 4.67e-01 | 71.4% | 55.4% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 52.0 | 4.72e-01 | 71.4% | 58.2% |
| 5y06A01 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 50.0 | 3.43e-01 | 70.0% | 21.0% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 49.0 | 4.39e-01 | 70.0% | 51.5% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 48.0 | 4.97e-01 | 71.4% | 75.8% |
| 1tfkB00 | 1.20.120.650 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Colicin D | 0.70 | 52.0 | 4.86e-01 | 100.0% | 64.0% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 57.0 | 5.15e-01 | 87.1% | 85.9% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.69 | 47.0 | 4.46e-01 | 71.4% | 59.8% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 46.0 | 4.05e-01 | 70.0% | 67.6% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.66 | 45.0 | 4.21e-01 | 71.4% | 82.2% |
| 3qa8A04 | 1.20.1270.250 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.66 | 45.0 | 3.16e-01 | 71.4% | 40.3% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 45.0 | 3.96e-01 | 74.3% | 81.0% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.63 | 44.0 | 4.19e-01 | 74.3% | 61.2% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 43.0 | 4.06e-01 | 71.4% | 64.8% |
| 3vkgB06 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.62 | 43.0 | 2.95e-01 | 71.4% | 20.4% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.62 | 51.0 | 4.55e-01 | 95.7% | 88.9% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.62 | 42.0 | 4.14e-01 | 70.0% | 93.2% |
| 3b8mC02 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 43.0 | 3.78e-01 | 72.9% | 60.6% |
| 3geeA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.60 | 55.0 | 4.06e-01 | 98.6% | 69.6% |
| 4a64C03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.59 | 47.0 | 4.21e-01 | 87.1% | 75.0% |
| 3crvA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 37.0 | 2.72e-01 | 81.4% | 22.8% |
| 1ybzA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.59 | 45.0 | 4.40e-01 | 97.1% | 77.6% |
| 2kseA00 | 1.20.5.1040 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Sensor protein qsec. | 0.59 | 42.0 | 4.13e-01 | 77.1% | 85.7% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.58 | 40.0 | 3.58e-01 | 74.3% | 55.1% |
| 2dk8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 4.36e-01 | 98.6% | 83.1% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 39.0 | 3.70e-01 | 71.4% | 90.6% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 46.0 | 4.55e-01 | 91.4% | 89.2% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.55 | 45.0 | 4.04e-01 | 97.1% | 75.7% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.54 | 41.0 | 3.80e-01 | 92.9% | 65.2% |
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.53 | 45.0 | 3.96e-01 | 97.1% | 65.7% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 45.0 | 3.85e-01 | 100.0% | 81.7% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4015025 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.99 | 96.0 | 7.09e-01 | 100.0% | 45.8% |
| 3395575 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.99 | 95.0 | 6.43e-01 | 98.6% | 33.7% |
| 4932569 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.99 | 91.0 | 6.15e-01 | 94.3% | 32.2% |
| 3968184 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.99 | 94.0 | 6.39e-01 | 98.6% | 33.7% |
| 3503763 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.98 | 95.0 | 6.42e-01 | 100.0% | 33.3% |
| 3934120 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.98 | 95.0 | 6.36e-01 | 100.0% | 32.6% |
| 3708260 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.98 | 94.0 | 5.94e-01 | 100.0% | 24.2% |
| 3291508 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.98 | 94.0 | 6.31e-01 | 100.0% | 32.6% |
| 3598076 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.96 | 92.0 | 6.47e-01 | 100.0% | 38.9% |
| 3331533 | 3559.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 | 0.78 | 54.0 | 4.17e-01 | 71.4% | 35.0% |
| 3911717 | 192.29.1.25 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › CA109-like | 0.77 | 52.0 | 3.71e-01 | 70.0% | 26.5% |
| 3884349 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.75 | 60.0 | 4.92e-01 | 85.7% | 61.6% |
| 4964878 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.74 | 50.0 | 5.08e-01 | 71.4% | 95.7% |
| 3534511 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.73 | 64.0 | 4.84e-01 | 95.7% | 49.4% |
| 3792 | 603.1.1.6 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 | 0.73 | 49.0 | 4.39e-01 | 70.0% | 51.5% |
| 3176663 | 603.1.1.207 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF30350 | 0.72 | 52.0 | 4.15e-01 | 74.3% | 52.3% |
| 3439611 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.72 | 53.0 | 4.85e-01 | 88.6% | 60.0% |
| 4638470 | 101.1.2.311 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA12 | 0.72 | 56.0 | 4.10e-01 | 81.4% | 85.9% |
| 2555592 | 5069.1.1.3 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_I | 0.70 | 48.0 | 4.49e-01 | 71.4% | 58.8% |
| 3369476 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.69 | 58.0 | 4.05e-01 | 92.9% | 31.6% |
| 4951266 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.69 | 48.0 | 2.95e-01 | 72.9% | 33.0% |
| 3995514 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.67 | 59.0 | 4.63e-01 | 97.1% | 73.8% |
| 1145756 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.66 | 50.0 | 4.24e-01 | 85.7% | 48.7% |
| 2772442 | 159.1.2.3 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › dATP-dGTP_PPHyd | 0.66 | 50.0 | 4.47e-01 | 95.7% | 57.6% |
| 3736853 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.66 | 44.0 | 3.17e-01 | 70.0% | 32.9% |
| 3702906 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.65 | 44.0 | 3.76e-01 | 71.4% | 41.7% |
| 5081618 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.65 | 44.0 | 3.69e-01 | 70.0% | 99.2% |
| 5039649 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 44.0 | 3.75e-01 | 71.4% | 61.7% |
| 3392556 | 604.1.1.3 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › MAP65_ASE1 | 0.64 | 44.0 | 3.65e-01 | 71.4% | 40.0% |
| 4025796 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 50.0 | 3.61e-01 | 91.4% | 29.3% |
| 3528091 | 5058.1.1.17 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › NRN1 | 0.64 | 45.0 | 3.95e-01 | 85.7% | 48.2% |
| 3609189 | 192.29.1.19 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Cornichon | 0.64 | 56.0 | 4.14e-01 | 98.6% | 44.0% |
| 4188712 | 605.1.1.194 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › NRN1 | 0.63 | 44.0 | 3.85e-01 | 90.0% | 47.3% |
| 4039421 | 3710.1.1.1 ↗ | alpha bundles › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › CHD5 | 0.63 | 43.0 | 3.87e-01 | 71.4% | 52.0% |
| 2067201 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.62 | 41.0 | 4.06e-01 | 70.0% | 64.9% |
| 3378958 | 109.4.1.1846 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30870 | 0.62 | 56.0 | 5.04e-01 | 100.0% | 90.4% |
| 3586871 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.62 | 48.0 | 3.58e-01 | 90.0% | 96.6% |
| 3313934 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.59 | 50.0 | 4.61e-01 | 100.0% | 85.3% |
| 4027027 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 52.0 | 3.81e-01 | 100.0% | 44.1% |
| 3249649 | 5059.1.1.3 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT | 0.58 | 44.0 | 2.95e-01 | 87.1% | 65.9% |
| 4930612 | 4009.1.1.4 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › DUF3243 | 0.58 | 51.0 | 4.90e-01 | 100.0% | 93.8% |
| 3198374 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.58 | 50.0 | 3.07e-01 | 100.0% | 31.5% |
| 3981640 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.57 | 38.0 | 3.55e-01 | 70.0% | 60.0% |
| 3247158 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 41.0 | 4.03e-01 | 98.6% | 72.0% |
| 3889578 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.54 | 44.0 | 3.79e-01 | 97.1% | 56.8% |
| 3770340 | 5041.1.1.2 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › TMEM169 | 0.54 | 38.0 | 3.39e-01 | 75.7% | 68.6% |
| 4061485 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.52 | 45.0 | 3.38e-01 | 100.0% | 38.3% |
| 5072135 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.51 | 41.0 | 3.04e-01 | 100.0% | 32.3% |