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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015162
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015162
Identity
- Kingdom:
- archaea
Quality
80.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 368-473
Domain cluster:
representative
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.81 | 38.0 | 4.27e-01 | 98.1% | 57.6% |
| 4h3tA02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.78 | 71.0 | 6.42e-01 | 98.1% | 96.5% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.75 | 40.0 | 5.40e-01 | 84.0% | 100.0% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.73 | 40.0 | 2.95e-01 | 99.1% | 21.8% |
| 3cqcB01 | 1.20.58.1380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 33.0 | 3.54e-01 | 88.7% | 48.9% |
| 3vkgA15 | 1.10.8.1220 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.70 | 58.0 | 6.13e-01 | 88.7% | 100.0% |
| 1urvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.70 | 52.0 | 4.55e-01 | 77.4% | 91.6% |
| 2mqaA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.68 | 58.0 | 5.54e-01 | 96.2% | 79.2% |
| 4b4yA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.68 | 50.0 | 4.50e-01 | 77.4% | 91.9% |
| 2k3nA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.68 | 54.0 | 4.77e-01 | 94.3% | 57.5% |
| 4ymuD00 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.68 | 48.0 | 3.84e-01 | 74.5% | 92.6% |
| 1a00B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.67 | 49.0 | 4.44e-01 | 76.4% | 93.2% |
| 1oj6A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.67 | 49.0 | 4.42e-01 | 77.4% | 95.9% |
| 1hlbA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.66 | 49.0 | 4.30e-01 | 78.3% | 86.0% |
| 6wk3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.66 | 48.0 | 4.40e-01 | 77.4% | 86.2% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.66 | 48.0 | 4.29e-01 | 76.4% | 94.6% |
| 2n3eA01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.65 | 53.0 | 5.19e-01 | 89.6% | 82.6% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.65 | 45.0 | 5.05e-01 | 73.6% | 93.8% |
| 2bl2A00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.64 | 49.0 | 4.32e-01 | 81.1% | 69.2% |
| 1binA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.64 | 47.0 | 4.31e-01 | 78.3% | 92.3% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 30.0 | 3.54e-01 | 89.6% | 64.4% |
| 7utzR02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.62 | 53.0 | 4.01e-01 | 95.3% | 64.5% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 34.0 | 3.49e-01 | 97.2% | 54.5% |
| 4fp4A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.61 | 53.0 | 4.11e-01 | 98.1% | 86.0% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 35.0 | 3.56e-01 | 99.1% | 56.9% |
| 3ihuA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.59 | 43.0 | 3.99e-01 | 82.1% | 59.0% |
| 3q5dA02 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.58 | 42.0 | 4.43e-01 | 75.5% | 84.5% |
| 1sj8A02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.58 | 50.0 | 4.82e-01 | 97.2% | 100.0% |
| 2xvtC00 | 1.10.150.510 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family | 0.57 | 39.0 | 4.42e-01 | 76.4% | 93.7% |
| 3qnmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 43.0 | 4.60e-01 | 91.5% | 97.8% |
| 1kn1B00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.56 | 39.0 | 3.49e-01 | 72.6% | 77.0% |
| 1oj7A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.56 | 47.0 | 3.93e-01 | 96.2% | 76.0% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 39.0 | 4.35e-01 | 87.7% | 96.2% |
| 2hs5A02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.56 | 41.0 | 3.82e-01 | 81.1% | 59.3% |
| 5oklA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.55 | 46.0 | 4.69e-01 | 91.5% | 96.0% |
| 1kmiZ02 | 1.10.287.500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.55 | 32.0 | 3.00e-01 | 99.1% | 44.0% |
| 2pv4A00 | 1.10.3440.10 | Mainly Alpha › Orthogonal Bundle › Sama2622-like fold › Sama2622-like | 0.54 | 45.0 | 4.12e-01 | 92.5% | 100.0% |
| 2z1qB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 47.0 | 4.34e-01 | 96.2% | 80.9% |
| 3r2kA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 47.0 | 4.19e-01 | 100.0% | 66.9% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 38.0 | 4.21e-01 | 84.9% | 93.9% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 44.0 | 4.14e-01 | 100.0% | 73.3% |
| 3bvxA02 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.53 | 40.0 | 4.01e-01 | 81.1% | 97.3% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.53 | 38.0 | 3.84e-01 | 85.8% | 77.1% |
| 4iu9B01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.53 | 46.0 | 3.64e-01 | 98.1% | 83.0% |
| 2etdA00 | 1.20.1440.20 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain | 0.52 | 46.0 | 4.21e-01 | 98.1% | 74.5% |
| 3nftA00 | 1.20.1710.10 | Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like | 0.52 | 39.0 | 2.97e-01 | 80.2% | 92.4% |
| 4ihuA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 46.0 | 3.75e-01 | 99.1% | 56.7% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.52 | 37.0 | 3.66e-01 | 75.5% | 91.5% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.52 | 37.0 | 3.71e-01 | 75.5% | 92.0% |
| 2hsbA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.51 | 39.0 | 3.77e-01 | 83.0% | 80.2% |
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.51 | 35.0 | 3.49e-01 | 70.8% | 67.3% |
| 5zw7A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 44.0 | 3.99e-01 | 98.1% | 86.2% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.51 | 38.0 | 4.16e-01 | 87.7% | 98.9% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3221299 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.75 | 35.0 | 3.24e-01 | 99.1% | 35.6% |
| 4030151 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.73 | 53.0 | 4.88e-01 | 74.5% | 80.7% |
| 3494116 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 65.0 | 5.11e-01 | 97.2% | 75.6% |
| 4024845 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.69 | 50.0 | 4.24e-01 | 76.4% | 66.3% |
| 4034270 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.67 | 47.0 | 5.20e-01 | 72.6% | 100.0% |
| 4034226 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.65 | 47.0 | 5.25e-01 | 74.5% | 100.0% |
| 3641811 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.65 | 51.0 | 5.48e-01 | 96.2% | 100.0% |
| 4397448 | 192.2.1.71 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › PF27758 | 0.64 | 57.0 | 4.42e-01 | 100.0% | 82.0% |
| 3880 | 611.5.1.1 ↗ | alpha bundles › N-cbl like › Superantigen MAM N-terminal domain › Superantigen MAM N-terminal domain › MA-Mit | 0.64 | 48.0 | 4.55e-01 | 78.3% | 76.8% |
| 4033035 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.64 | 45.0 | 5.04e-01 | 73.6% | 98.8% |
| 3641196 | 5041.1.1.27 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › PRA1 | 0.62 | 38.0 | 3.74e-01 | 100.0% | 56.5% |
| 4453428 | 1037.1.1.1 ↗ | alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT | 0.60 | 48.0 | 3.57e-01 | 86.8% | 80.4% |
| 5060140 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.59 | 36.0 | 4.46e-01 | 93.4% | 100.0% |
| 4020294 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.59 | 41.0 | 3.28e-01 | 94.3% | 35.0% |
| 3218650 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.57 | 32.0 | 3.25e-01 | 95.3% | 53.3% |
| 3608879 | 531.3.1.0 ↗ | alpha arrays › Domains of FliG › N-terminal domain of FliG › N-terminal domain of FliG | 0.57 | 38.0 | 3.76e-01 | 96.2% | 63.5% |
| 3410979 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.57 | 51.0 | 3.61e-01 | 100.0% | 81.8% |
| 4928071 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.56 | 49.0 | 3.58e-01 | 99.1% | 69.4% |
| 3617829 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 33.0 | 3.15e-01 | 99.1% | 48.8% |
| 4510378 | 1037.1.1.1 ↗ | alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT | 0.56 | 48.0 | 3.75e-01 | 98.1% | 80.0% |
| 3970194 | 3896.1.1.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase | 0.55 | 47.0 | 3.58e-01 | 99.1% | 86.5% |
| 4009669 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.54 | 48.0 | 4.03e-01 | 100.0% | 100.0% |
| 3190576 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.54 | 41.0 | 4.13e-01 | 94.3% | 78.2% |
| 3961705 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.54 | 40.0 | 3.60e-01 | 82.1% | 56.0% |
| 5071394 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.53 | 41.0 | 3.79e-01 | 83.0% | 90.7% |
| 1551310 | 633.25.1.1 ↗ | alpha bundles › Bromodomain-like › Lpg0393 helical domain › Lpg0393 helical domain › HBD | 0.52 | 41.0 | 4.24e-01 | 98.1% | 92.9% |
| 4983663 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.51 | 36.0 | 3.96e-01 | 72.6% | 100.0% |
| 5044068 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.51 | 39.0 | 4.08e-01 | 81.1% | 96.8% |
| 3649819 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.51 | 40.0 | 3.78e-01 | 83.0% | 97.6% |
| 4958879 | 140.1.1.7 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 | 0.50 | 37.0 | 3.38e-01 | 79.2% | 58.0% |
| 3273336 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.50 | 40.0 | 3.02e-01 | 84.0% | 82.8% |
D2
medium
residues 1-95_179-207_303-354
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09481.16 best | CRISPR_Cse1 | 61.5 | 1.30e-16 | 54.0% | 19.2% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8g4uA02 | 3.30.70.3290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 24.0 | 3.21e-01 | 75.0% | 86.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3979217 | 3576.1.1.1 ↗ | a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 › CRISPR_Cse1 | 0.90 | 87.0 | 5.99e-01 | 100.0% | 72.4% |
| 4006151 | 3576.1.1.1 ↗ | a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 › CRISPR_Cse1 | 0.89 | 86.0 | 5.97e-01 | 100.0% | 72.1% |
| 1681350 | 3576.1.1.0 ↗ | a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 | 0.88 | 85.0 | 5.92e-01 | 100.0% | 71.7% |
| 1489431 | 3576.1.1.0 ↗ | a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 | 0.85 | 80.0 | 5.52e-01 | 100.0% | 71.1% |
| 999868 | 3576.1.1.0 ↗ | a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 | 0.83 | 79.0 | 5.49e-01 | 100.0% | 68.5% |
| 223980 | 3576.1.1.0 ↗ | a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 | 0.80 | 76.0 | 5.43e-01 | 100.0% | 70.7% |
D3
medium
residues 96-178_208-302
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09481.16 best | CRISPR_Cse1 | 31.9 | 1.20e-07 | 100.0% | 39.1% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2m05A00 | 3.30.1490.140 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Amyloidogenic glycoprotein, copper-binding domain | 0.58 | 24.0 | 3.65e-01 | 85.4% | 95.4% |
| 3ue2A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 22.0 | 3.08e-01 | 78.1% | 68.2% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.53 | 27.0 | 3.69e-01 | 76.4% | 97.8% |
| 5aj3F00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.52 | 24.0 | 2.77e-01 | 78.1% | 56.1% |
| 4fvmA02 | 3.30.70.2820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 21.0 | 2.76e-01 | 79.2% | 65.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3979217 | 3576.1.1.1 ↗ | a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 › CRISPR_Cse1 | 0.93 | 90.0 | 6.18e-01 | 100.0% | 43.5% |
| 4006151 | 3576.1.1.1 ↗ | a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 › CRISPR_Cse1 | 0.83 | 79.0 | 5.52e-01 | 100.0% | 42.2% |
| 1681350 | 3576.1.1.0 ↗ | a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 | 0.82 | 78.0 | 5.52e-01 | 100.0% | 41.5% |
| 3350776 | 304.5.1.23 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › V_ATPase_I | 0.67 | 24.0 | 3.58e-01 | 77.5% | 71.2% |
| 3569962 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.63 | 24.0 | 3.24e-01 | 77.5% | 62.1% |
| 3522520 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.61 | 23.0 | 3.37e-01 | 77.5% | 73.8% |
| 327528 | 328.1.1.2 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › SpoVS | 0.53 | 27.0 | 3.69e-01 | 76.4% | 97.8% |
| 4996403 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 23.0 | 3.11e-01 | 73.6% | 81.1% |
| 3729608 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.50 | 26.0 | 2.98e-01 | 84.3% | 65.6% |
| 3579336 | 304.5.1.23 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › V_ATPase_I | 0.50 | 25.0 | 3.18e-01 | 80.3% | 78.2% |
| 5052024 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.50 | 19.0 | 2.67e-01 | 77.5% | 68.2% |
D4
medium
residues 475-551_570-581