Back to structures

IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015231

Arc-Vir

IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015231

Quality

74.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-97
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6vydA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.54 40.0 2.82e-01 79.1% 46.6%
5g5gA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.51 31.0 3.21e-01 79.1% 61.1%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4914258 4095.1.1.3 alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M 0.52 42.0 3.62e-01 89.0% 59.7%
5017862 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.51 35.0 3.27e-01 72.5% 80.8%