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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015249
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015249
Identity
- Kingdom:
- archaea
Quality
93.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-79
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 38.0 | 4.37e-01 | 89.5% | 68.4% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.65 | 58.0 | 5.57e-01 | 100.0% | 92.0% |
| 3fo5B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.64 | 45.0 | 3.22e-01 | 73.7% | 79.0% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 42.0 | 4.45e-01 | 92.1% | 78.8% |
| 5cenA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 43.0 | 4.28e-01 | 71.1% | 96.2% |
| 6j5tB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 54.0 | 4.64e-01 | 100.0% | 99.2% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.58 | 46.0 | 3.45e-01 | 85.5% | 83.5% |
| 5o7oC01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.58 | 40.0 | 3.45e-01 | 72.4% | 49.6% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.56 | 46.0 | 3.86e-01 | 93.4% | 80.9% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.55 | 45.0 | 3.73e-01 | 92.1% | 89.7% |
| 2fblB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.55 | 40.0 | 3.28e-01 | 78.9% | 73.6% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.54 | 40.0 | 3.29e-01 | 100.0% | 40.5% |
| 1l0wA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 40.0 | 3.59e-01 | 81.6% | 78.3% |
| 6nrzA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 40.0 | 3.19e-01 | 85.5% | 66.5% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.50 | 38.0 | 3.46e-01 | 78.9% | 67.3% |
| 4meaA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 36.0 | 2.47e-01 | 77.6% | 92.9% |
| 2w18A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 41.0 | 2.71e-01 | 88.2% | 89.2% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3457086 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.73 | 53.0 | 3.54e-01 | 76.3% | 31.2% |
| 3994368 | 5.1.8.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › APEH_N | 0.72 | 47.0 | 3.27e-01 | 72.4% | 22.2% |
| 5001968 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.70 | 55.0 | 5.72e-01 | 97.4% | 95.7% |
| 3944566 | 809.1.1.10 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › EndoU_bacteria | 0.69 | 51.0 | 5.60e-01 | 78.9% | 100.0% |
| 4993636 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.67 | 52.0 | 5.43e-01 | 97.4% | 94.3% |
| 3926131 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.67 | 47.0 | 3.29e-01 | 73.7% | 75.7% |
| 3272801 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.66 | 45.0 | 2.88e-01 | 71.1% | 46.1% |
| 4993341 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.65 | 51.0 | 5.29e-01 | 97.4% | 95.7% |
| 3798317 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.65 | 48.0 | 3.57e-01 | 80.3% | 85.0% |
| 3854043 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.64 | 44.0 | 3.20e-01 | 71.1% | 78.1% |
| 3628966 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.64 | 48.0 | 3.41e-01 | 80.3% | 74.7% |
| 3255474 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.63 | 51.0 | 3.30e-01 | 85.5% | 29.4% |
| 3972767 | 206.1.1.17 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo | 0.62 | 55.0 | 3.36e-01 | 100.0% | 23.7% |
| 4972768 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.62 | 45.0 | 3.03e-01 | 76.3% | 45.3% |
| 5028231 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.60 | 53.0 | 4.68e-01 | 100.0% | 76.1% |
| 3643481 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.60 | 55.0 | 3.45e-01 | 100.0% | 36.1% |
| 3588277 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.60 | 51.0 | 4.52e-01 | 97.4% | 73.9% |
| 4951170 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.59 | 41.0 | 4.27e-01 | 73.7% | 98.6% |
| 3597793 | 5094.1.1.0 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like | 0.59 | 45.0 | 3.71e-01 | 81.6% | 49.6% |
| 3364229 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.59 | 44.0 | 2.88e-01 | 78.9% | 87.3% |
| 3498107 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 49.0 | 3.20e-01 | 89.5% | 29.3% |
| 4228206 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.58 | 41.0 | 4.10e-01 | 75.0% | 98.8% |
| 5013018 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.58 | 40.0 | 3.43e-01 | 73.7% | 58.5% |
| 4028683 | 3504.3.1.0 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain | 0.58 | 42.0 | 3.23e-01 | 100.0% | 32.8% |
| 5007357 | 3435.1.1.10 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › PF27341 | 0.57 | 45.0 | 3.18e-01 | 84.2% | 28.4% |
| 5041833 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 40.0 | 4.23e-01 | 96.1% | 83.8% |
| 5056462 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.57 | 48.0 | 4.64e-01 | 100.0% | 86.7% |
| 3380131 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.57 | 42.0 | 2.73e-01 | 77.6% | 85.1% |
| 4950203 | 331.4.1.35 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › PF27341 | 0.56 | 45.0 | 3.15e-01 | 85.5% | 28.5% |
| 3782489 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 48.0 | 2.98e-01 | 100.0% | 81.6% |
| 5004871 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.55 | 44.0 | 4.12e-01 | 84.2% | 77.8% |
| 4930594 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.55 | 41.0 | 4.17e-01 | 93.4% | 80.0% |
| 5019907 | 5.1.5.233 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PD40 | 0.54 | 46.0 | 3.03e-01 | 92.1% | 87.5% |
| 4216985 | 331.19.1.2 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin_N | 0.54 | 44.0 | 4.23e-01 | 98.7% | 78.8% |
| 3387201 | 5.1.3.20 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PD40 | 0.54 | 42.0 | 2.77e-01 | 82.9% | 75.4% |
| 5078190 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.54 | 47.0 | 3.27e-01 | 100.0% | 52.8% |
| 3240119 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.53 | 47.0 | 4.25e-01 | 100.0% | 72.4% |
| 3820829 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.53 | 43.0 | 2.85e-01 | 88.2% | 81.3% |
| 4966955 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.52 | 39.0 | 4.05e-01 | 100.0% | 85.7% |
| 5060093 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.52 | 38.0 | 3.86e-01 | 98.7% | 78.4% |
| 5077033 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 42.0 | 2.92e-01 | 90.8% | 40.7% |
| 4106226 | 5.1.4.29 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PD40 | 0.52 | 45.0 | 2.92e-01 | 92.1% | 78.6% |
| 3768859 | 206.1.1.17 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo | 0.51 | 47.0 | 3.22e-01 | 100.0% | 38.4% |
| 3228756 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.51 | 41.0 | 2.66e-01 | 90.8% | 27.2% |
| 4950404 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.50 | 38.0 | 3.84e-01 | 98.7% | 81.3% |