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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015297
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015297
Identity
- Kingdom:
- archaea
Quality
86.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-91
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7d58G02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 35.0 | 3.37e-01 | 81.8% | 50.0% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 41.0 | 4.61e-01 | 87.5% | 95.4% |
| 1wuoA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 40.0 | 3.01e-01 | 72.7% | 42.9% |
| 3pg4A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 40.0 | 2.97e-01 | 72.7% | 39.6% |
| 5hp6A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 43.0 | 2.89e-01 | 79.5% | 24.8% |
| 3g8yA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 41.0 | 2.67e-01 | 75.0% | 38.9% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 38.0 | 2.78e-01 | 71.6% | 30.2% |
| 2g8sB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 44.0 | 2.99e-01 | 86.4% | 93.9% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.54 | 40.0 | 3.01e-01 | 87.5% | 30.0% |
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 45.0 | 3.80e-01 | 90.9% | 87.9% |
| 3imhA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 43.0 | 2.96e-01 | 87.5% | 84.3% |
| 4f8bA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.53 | 37.0 | 3.29e-01 | 73.9% | 83.5% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 41.0 | 4.22e-01 | 84.1% | 98.8% |
| 1a1aB00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 41.0 | 3.97e-01 | 84.1% | 86.3% |
| 3cqnB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 41.0 | 3.45e-01 | 86.4% | 91.3% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.53 | 39.0 | 4.06e-01 | 88.6% | 87.3% |
| 3f6gA02 | 3.30.160.340 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 35.0 | 4.07e-01 | 71.6% | 96.8% |
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 33.0 | 3.83e-01 | 80.7% | 94.8% |
| 4n4bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 41.0 | 2.89e-01 | 88.6% | 86.8% |
| 2lttA00 | 2.30.31.70 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.51 | 31.0 | 3.39e-01 | 77.3% | 74.3% |
| 4xrtA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 40.0 | 3.46e-01 | 87.5% | 58.5% |
| 2ky8A00 | 3.30.890.10 | Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A | 0.50 | 34.0 | 3.63e-01 | 89.8% | 87.1% |
| 1cp9B02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.50 | 34.0 | 3.64e-01 | 76.1% | 83.6% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3981209 | 809.1.1.1 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA | 0.76 | 47.0 | 4.98e-01 | 75.0% | 70.0% |
| 3604640 | 3740.1.1.1 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C | 0.65 | 42.0 | 3.01e-01 | 89.8% | 22.7% |
| 3517149 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.65 | 43.0 | 2.86e-01 | 81.8% | 16.3% |
| 5053329 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 43.0 | 3.90e-01 | 71.6% | 90.0% |
| 4944791 | 5.1.4.29 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PD40 | 0.60 | 36.0 | 2.49e-01 | 71.6% | 16.0% |
| 4029209 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 38.0 | 4.16e-01 | 75.0% | 81.4% |
| 3323289 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.58 | 34.0 | 3.78e-01 | 86.4% | 74.3% |
| 3949006 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.57 | 39.0 | 2.69e-01 | 71.6% | 23.3% |
| 3289877 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.57 | 31.0 | 3.92e-01 | 78.4% | 94.0% |
| 5082246 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 35.0 | 4.02e-01 | 71.6% | 90.0% |
| 3934831 | 5.1.2.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Apyrase | 0.55 | 45.0 | 3.12e-01 | 92.0% | 88.7% |
| 3772065 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.54 | 44.0 | 4.06e-01 | 100.0% | 68.7% |
| 4666231 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.54 | 42.0 | 3.44e-01 | 86.4% | 77.1% |
| 4528719 | 4.1.1.438 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27440 | 0.52 | 36.0 | 4.07e-01 | 87.5% | 96.9% |
| 4938177 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.52 | 46.0 | 3.96e-01 | 100.0% | 68.3% |
| 3801910 | 5.1.3.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SGL, SSL_N | 0.52 | 41.0 | 2.95e-01 | 92.0% | 90.6% |
| 3695678 | 3924.1.1.0 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 | 0.51 | 46.0 | 2.89e-01 | 97.7% | 21.8% |
| 5034832 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 36.0 | 4.00e-01 | 84.1% | 94.3% |
| 4204262 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.51 | 44.0 | 3.74e-01 | 100.0% | 76.6% |
| 3346659 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 40.0 | 3.87e-01 | 100.0% | 75.0% |
| 3332863 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 40.0 | 3.84e-01 | 100.0% | 75.0% |
| 4003255 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.50 | 38.0 | 2.79e-01 | 83.0% | 83.5% |