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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015303
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015303
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-126
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rioA01 | 2.30.24.10 | Mainly Beta › Roll › Transcription Regulation, Sacy; Chain A › CAT RNA-binding domain | 0.61 | 37.0 | 4.05e-01 | 98.9% | 76.5% |
D2
high
residues 152-240
Domain cluster:
rep: H2c1_full_idba_ud_scaffold_88_prodigal-single.1__X__X__00134__D121-204
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jxoA00 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.76 | 53.0 | 5.48e-01 | 97.8% | 76.2% |
| 4gx0B03 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.75 | 51.0 | 5.46e-01 | 95.5% | 80.8% |
| 5f29B00 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.75 | 49.0 | 5.35e-01 | 93.3% | 83.1% |
| 4g65A04 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.74 | 53.0 | 5.33e-01 | 97.8% | 73.6% |
| 7agvB01 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.73 | 52.0 | 5.43e-01 | 95.5% | 81.5% |
| 4g65B02 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.72 | 51.0 | 5.09e-01 | 95.5% | 70.7% |
| 2bkoA02 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.71 | 50.0 | 5.22e-01 | 95.5% | 80.2% |
| 2vdrB02 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.64 | 46.0 | 3.84e-01 | 98.9% | 43.8% |
| 5e6sB02 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.60 | 42.0 | 3.56e-01 | 98.9% | 43.9% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.60 | 42.0 | 3.97e-01 | 100.0% | 60.2% |
| 6voxA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.59 | 40.0 | 3.56e-01 | 98.9% | 47.7% |
| 6z0jA03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.59 | 42.0 | 3.83e-01 | 98.9% | 55.4% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.57 | 37.0 | 3.79e-01 | 97.8% | 69.5% |
| 4fkeA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.57 | 48.0 | 3.59e-01 | 100.0% | 37.3% |
| 3wi9A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.57 | 39.0 | 2.72e-01 | 98.9% | 20.5% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 48.0 | 4.03e-01 | 98.9% | 71.8% |
| 3i3wA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.54 | 35.0 | 3.68e-01 | 96.6% | 74.0% |
| 4mboA02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 47.0 | 3.91e-01 | 97.8% | 84.1% |
| 4aw7A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 41.0 | 3.77e-01 | 97.8% | 63.6% |
| 2dt4A00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.53 | 47.0 | 4.05e-01 | 100.0% | 85.3% |
| 6k3dA03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.52 | 41.0 | 3.59e-01 | 96.6% | 53.8% |
| 4mbrA02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 46.0 | 3.79e-01 | 98.9% | 63.9% |
| 3gf6A00 | 2.60.120.750 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF3845 | 0.52 | 45.0 | 3.45e-01 | 97.8% | 67.1% |
| 1yi9A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 42.0 | 3.71e-01 | 100.0% | 58.4% |
| 2vncA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 36.0 | 3.40e-01 | 96.6% | 58.7% |
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.52 | 45.0 | 3.82e-01 | 97.8% | 90.6% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4975274 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.82 | 56.0 | 6.25e-01 | 94.4% | 90.0% |
| 5037982 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.79 | 55.0 | 5.87e-01 | 97.8% | 81.0% |
| 4949346 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.79 | 54.0 | 5.58e-01 | 96.6% | 74.1% |
| 5033210 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.79 | 54.0 | 5.70e-01 | 96.6% | 78.8% |
| 4967001 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.78 | 52.0 | 5.36e-01 | 96.6% | 71.8% |
| 5042240 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.77 | 52.0 | 5.43e-01 | 95.5% | 76.2% |
| 138113 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.76 | 52.0 | 5.43e-01 | 96.6% | 75.9% |
| 4104997 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.76 | 52.0 | 5.36e-01 | 96.6% | 74.1% |
| 4966995 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.76 | 53.0 | 5.31e-01 | 97.8% | 71.1% |
| 5067701 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.75 | 52.0 | 5.53e-01 | 97.8% | 81.0% |
| 4969956 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.75 | 52.0 | 5.37e-01 | 96.6% | 75.3% |
| 1277765 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.75 | 53.0 | 5.33e-01 | 94.4% | 72.5% |
| 4937666 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.74 | 53.0 | 5.49e-01 | 96.6% | 78.8% |
| 5002413 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.74 | 51.0 | 5.26e-01 | 96.6% | 75.0% |
| 4954616 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.74 | 52.0 | 5.65e-01 | 98.9% | 86.7% |
| 4591799 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.74 | 51.0 | 5.68e-01 | 95.5% | 91.4% |
| 5038793 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.74 | 53.0 | 5.49e-01 | 96.6% | 78.8% |
| 5028027 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.74 | 51.0 | 5.21e-01 | 96.6% | 74.1% |
| 4058638 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.74 | 52.0 | 5.30e-01 | 96.6% | 75.3% |
| 4965733 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.74 | 54.0 | 5.54e-01 | 97.8% | 80.0% |
| 4246586 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.73 | 55.0 | 5.48e-01 | 98.9% | 77.8% |
| 4964109 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.73 | 54.0 | 5.50e-01 | 96.6% | 81.2% |
| 3283932 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.72 | 50.0 | 5.05e-01 | 97.8% | 71.1% |
| 4194364 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.72 | 52.0 | 5.52e-01 | 97.8% | 85.0% |
| 3947552 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.72 | 54.0 | 5.34e-01 | 96.6% | 74.7% |
| 4963156 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.72 | 53.0 | 5.33e-01 | 95.5% | 76.7% |
| 4964001 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.70 | 49.0 | 5.10e-01 | 96.6% | 80.0% |
| 4132856 | 4261.1.1.0 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like | 0.67 | 56.0 | 5.59e-01 | 98.9% | 87.8% |
| 5037980 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.65 | 45.0 | 4.43e-01 | 100.0% | 67.4% |
| 3239560 | 209.1.1.14 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › PF29411 | 0.59 | 50.0 | 3.92e-01 | 100.0% | 97.7% |
| 3218489 | 209.1.1.14 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › PF29411 | 0.58 | 50.0 | 4.02e-01 | 98.9% | 88.6% |
| 3211219 | 209.1.1.14 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › PF29411 | 0.58 | 50.0 | 4.02e-01 | 98.9% | 90.8% |
| 3062996 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.57 | 48.0 | 4.20e-01 | 98.9% | 60.4% |
| 3416094 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.55 | 49.0 | 3.70e-01 | 100.0% | 40.5% |
| 3235630 | 209.1.1.14 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › PF29411 | 0.55 | 47.0 | 3.70e-01 | 97.8% | 80.0% |
| 3554985 | 929.1.1.4 ↗ | beta duplicates or obligate multimers › Resistin › Resistin › Resistin › PCSK9_C2 | 0.55 | 42.0 | 4.57e-01 | 98.9% | 98.7% |
| 4957575 | 1.16.1.0 ↗ | beta barrels › cradle loop barrel › Baseplate wedge protein gp6 domain I › Baseplate wedge protein gp6 domain I | 0.55 | 45.0 | 4.67e-01 | 96.6% | 100.0% |
| 3960404 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.54 | 40.0 | 3.55e-01 | 98.9% | 51.9% |
| 5050766 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 47.0 | 3.92e-01 | 98.9% | 71.5% |
| 3231176 | 209.1.1.14 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › PF29411 | 0.54 | 47.0 | 3.77e-01 | 98.9% | 90.3% |
| 3222092 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 4.01e-01 | 98.9% | 65.6% |
| 4009335 | 12.1.1.62 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF987 | 0.53 | 34.0 | 3.66e-01 | 100.0% | 79.5% |
| 4857421 | 11.1.1.361 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_123_N_2 | 0.53 | 45.0 | 3.95e-01 | 96.6% | 73.5% |
| 3900710 | 10.2.1.39 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C | 0.53 | 44.0 | 3.38e-01 | 94.4% | 65.6% |
| 3380880 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.52 | 45.0 | 3.33e-01 | 96.6% | 35.9% |
| 3896164 | 10.2.1.39 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C | 0.52 | 44.0 | 3.27e-01 | 93.3% | 60.4% |
| 3226708 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.52 | 45.0 | 3.67e-01 | 97.8% | 87.6% |
| 4404886 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.52 | 39.0 | 3.37e-01 | 97.8% | 49.3% |
| 3786241 | 864.1.1.2 ↗ | a+b two layers › DLC › DLC › DLC › Tctex-1 | 0.51 | 44.0 | 4.18e-01 | 93.3% | 97.1% |
| 3379879 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 42.0 | 3.56e-01 | 93.3% | 94.4% |
| 4016642 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 44.0 | 3.57e-01 | 97.8% | 52.5% |
| 3921542 | 10.32.1.69 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B | 0.50 | 44.0 | 3.41e-01 | 97.8% | 49.0% |
| 4296109 | 10.2.1.39 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C | 0.50 | 44.0 | 3.28e-01 | 100.0% | 37.5% |
D3
high
residues 246-379
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00042__D33-154