Back to structures

IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015317

Arc-Vir

IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015317

Quality

78.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 50-191
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2y8tA03 2.10.70.70 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.60 19.0 3.00e-01 93.0% 69.1%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 24.0 2.68e-01 97.2% 44.1%
3fqmA01 2.20.25.210 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B 0.53 19.0 2.95e-01 80.3% 78.7%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.50 41.0 3.58e-01 87.3% 84.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3787619 206.1.3.21 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.53 34.0 3.78e-01 95.8% 80.9%
4929398 3604.1.1.0 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain 0.53 25.0 3.32e-01 95.8% 81.2%
4969645 832.1.1.0 a+b three layers › N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 › N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 › N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 0.52 34.0 3.73e-01 95.1% 81.7%
D2 medium residues 1-49_192-232
PDB
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3on5B02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 44.0 3.64e-01 81.1% 94.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.54 39.0 2.70e-01 75.6% 73.1%
3171279 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.51 38.0 2.70e-01 83.3% 91.9%