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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_100001532
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_100001532
Identity
- Kingdom:
- archaea
Quality
82.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-70
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gtjA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 60.0 | 5.87e-01 | 97.1% | 78.4% |
| 2k3aA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.68 | 53.0 | 4.69e-01 | 100.0% | 58.0% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 54.0 | 5.28e-01 | 98.6% | 80.0% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 57.0 | 5.73e-01 | 100.0% | 97.1% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 55.0 | 5.66e-01 | 100.0% | 98.4% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 47.0 | 5.05e-01 | 100.0% | 93.0% |
| 3e19B01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.65 | 54.0 | 5.53e-01 | 100.0% | 100.0% |
| 4bf3A00 | 2.30.31.50 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F | 0.64 | 50.0 | 4.00e-01 | 84.1% | 76.7% |
| 1krlA00 | 6.20.50.130 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.63 | 34.0 | 4.06e-01 | 81.2% | 81.8% |
| 1v5mA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 54.0 | 4.37e-01 | 100.0% | 71.3% |
| 4qucA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 43.0 | 4.67e-01 | 84.1% | 92.9% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 48.0 | 4.73e-01 | 95.7% | 80.0% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 48.0 | 4.80e-01 | 100.0% | 87.5% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 44.0 | 4.56e-01 | 89.9% | 90.3% |
| 3kf8A00 | 2.40.50.1040 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 45.0 | 3.27e-01 | 84.1% | 46.4% |
| 2db5A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.58 | 41.0 | 3.47e-01 | 75.4% | 67.2% |
| 2d9wA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 46.0 | 4.03e-01 | 89.9% | 76.4% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 44.0 | 3.64e-01 | 91.3% | 45.1% |
| 3qkgA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 48.0 | 3.77e-01 | 100.0% | 68.3% |
| 4wsfA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 49.0 | 4.21e-01 | 100.0% | 81.1% |
| 2qg7B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 44.0 | 3.88e-01 | 87.0% | 66.3% |
| 3wa1A01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 44.0 | 3.44e-01 | 89.9% | 66.3% |
| 2crfA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 47.0 | 3.96e-01 | 100.0% | 77.6% |
| 2ltsA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 41.0 | 3.86e-01 | 85.5% | 65.1% |
| 1ddvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 47.0 | 4.16e-01 | 100.0% | 87.5% |
| 3pvlA04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 42.0 | 3.83e-01 | 89.9% | 68.7% |
| 1c8bA00 | 3.40.50.1450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HybD-like | 0.54 | 40.0 | 2.65e-01 | 81.2% | 67.5% |
| 2eyzA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 39.0 | 3.64e-01 | 79.7% | 64.8% |
| 3li9A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 41.0 | 3.46e-01 | 84.1% | 97.6% |
| 4v19S00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.53 | 37.0 | 3.03e-01 | 75.4% | 85.3% |
| 6cz7A01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.53 | 36.0 | 3.76e-01 | 94.2% | 79.0% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 3.93e-01 | 94.2% | 81.2% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 41.0 | 4.08e-01 | 85.5% | 83.1% |
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 39.0 | 3.42e-01 | 85.5% | 54.3% |
| 1whnA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 38.0 | 3.45e-01 | 85.5% | 56.4% |
| 2i5hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 39.0 | 3.91e-01 | 84.1% | 88.9% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3238955 | 4.1.1.377 ↗ | beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like | 0.72 | 55.0 | 5.27e-01 | 97.1% | 71.2% |
| 3212772 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.72 | 54.0 | 5.35e-01 | 97.1% | 77.0% |
| 3236073 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.69 | 52.0 | 5.13e-01 | 97.1% | 76.0% |
| 3585538 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.69 | 54.0 | 4.82e-01 | 98.6% | 59.0% |
| 3582876 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.69 | 54.0 | 4.74e-01 | 98.6% | 56.2% |
| 3620016 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.69 | 47.0 | 5.13e-01 | 71.0% | 100.0% |
| 3793962 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.69 | 54.0 | 4.99e-01 | 98.6% | 65.6% |
| 3935469 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.69 | 52.0 | 5.22e-01 | 97.1% | 80.0% |
| 3879132 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.67 | 57.0 | 5.58e-01 | 100.0% | 86.7% |
| 3561094 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.66 | 56.0 | 5.47e-01 | 100.0% | 86.7% |
| 3710561 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.66 | 54.0 | 5.55e-01 | 97.1% | 96.9% |
| 3290564 | 4.1.1.292 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 | 0.65 | 56.0 | 5.18e-01 | 98.6% | 75.6% |
| 3395736 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.65 | 50.0 | 5.26e-01 | 85.5% | 95.0% |
| 3706361 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 56.0 | 4.67e-01 | 100.0% | 68.0% |
| 3594811 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 54.0 | 5.52e-01 | 97.1% | 100.0% |
| 4962087 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 41.0 | 4.41e-01 | 85.5% | 78.3% |
| 3985617 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.63 | 48.0 | 4.85e-01 | 82.6% | 90.0% |
| 3222570 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 55.0 | 4.69e-01 | 100.0% | 79.1% |
| 3170649 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.62 | 54.0 | 5.06e-01 | 97.1% | 85.9% |
| 3228051 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.62 | 43.0 | 4.42e-01 | 92.8% | 76.9% |
| 3670468 | 4.1.1.332 ↗ | beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 | 0.62 | 54.0 | 4.44e-01 | 100.0% | 56.2% |
| 3515884 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 54.0 | 4.56e-01 | 100.0% | 78.3% |
| 1112010 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.61 | 48.0 | 4.73e-01 | 95.7% | 80.0% |
| 3935716 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.61 | 47.0 | 4.68e-01 | 100.0% | 81.3% |
| 3427966 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.61 | 44.0 | 4.69e-01 | 84.1% | 90.0% |
| 3487913 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.60 | 47.0 | 4.39e-01 | 85.5% | 68.2% |
| 3495447 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.60 | 46.0 | 3.94e-01 | 98.6% | 49.2% |
| 3856429 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.60 | 44.0 | 3.68e-01 | 78.3% | 70.0% |
| 3491615 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.60 | 46.0 | 3.22e-01 | 98.6% | 23.6% |
| 3429075 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.60 | 46.0 | 4.52e-01 | 87.0% | 77.3% |
| 3798312 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.59 | 46.0 | 4.59e-01 | 100.0% | 85.7% |
| 3718300 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 44.0 | 4.32e-01 | 81.2% | 86.7% |
| 4931072 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.58 | 43.0 | 4.37e-01 | 91.3% | 80.0% |
| 3553413 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.57 | 46.0 | 4.36e-01 | 97.1% | 75.3% |
| 3652990 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.56 | 46.0 | 4.25e-01 | 91.3% | 76.7% |
| 3487703 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 48.0 | 3.94e-01 | 100.0% | 83.7% |
| 4997059 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.55 | 43.0 | 4.26e-01 | 91.3% | 80.0% |
| 3549321 | 4.11.1.5 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24, PF31032 | 0.55 | 45.0 | 3.51e-01 | 100.0% | 40.6% |
| 3815495 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.54 | 41.0 | 4.17e-01 | 100.0% | 84.3% |
| 4990492 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 37.0 | 4.20e-01 | 71.0% | 100.0% |
| 3630007 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.54 | 38.0 | 3.38e-01 | 92.8% | 49.1% |
| 3834563 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.53 | 43.0 | 4.17e-01 | 97.1% | 78.8% |
| 3579362 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.53 | 38.0 | 3.29e-01 | 91.3% | 47.3% |
| 3419793 | 5.1.10.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF295 | 0.52 | 48.0 | 3.80e-01 | 100.0% | 51.9% |
| 3975564 | 804.1.1.1 ↗ | a+b four layers › Hypothetical protein YwqG › Hypothetical protein YwqG › Hypothetical protein YwqG › DUF1963 | 0.52 | 43.0 | 3.03e-01 | 100.0% | 37.6% |
| 3797569 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 36.0 | 3.92e-01 | 92.8% | 92.7% |
| 3285829 | 4.1.1.425 ↗ | beta barrels › SH3 › SH3 › SH3 › RNHCP | 0.52 | 41.0 | 3.73e-01 | 94.2% | 83.8% |
| 3208784 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.51 | 43.0 | 3.44e-01 | 100.0% | 73.8% |