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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015339
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015339
Identity
- Kingdom:
- archaea
Quality
88.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-82_176-188
Domain cluster:
representative
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.67 | 53.0 | 4.46e-01 | 83.2% | 81.7% |
| 5yjlD01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 45.0 | 3.97e-01 | 75.8% | 99.3% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 52.0 | 4.31e-01 | 90.5% | 75.9% |
| 1x99A00 | 2.60.270.20 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin | 0.61 | 52.0 | 4.53e-01 | 92.6% | 95.2% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 37.0 | 4.08e-01 | 74.7% | 76.0% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 40.0 | 4.65e-01 | 84.2% | 100.0% |
| 5hp6A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 45.0 | 3.10e-01 | 78.9% | 34.3% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.60 | 50.0 | 4.76e-01 | 91.6% | 96.5% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 50.0 | 4.13e-01 | 93.7% | 78.5% |
| 3h3hB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 45.0 | 4.15e-01 | 81.1% | 93.3% |
| 4ge1C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 51.0 | 4.13e-01 | 100.0% | 72.0% |
| 3h4zB03 | 3.15.10.50 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › | 0.58 | 47.0 | 3.81e-01 | 89.5% | 84.8% |
| 1vkdA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 42.0 | 2.91e-01 | 75.8% | 80.4% |
| 2g30A02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.58 | 45.0 | 4.26e-01 | 95.8% | 69.0% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 46.0 | 4.31e-01 | 84.2% | 78.1% |
| 3fcyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 40.0 | 2.87e-01 | 73.7% | 44.8% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 50.0 | 4.34e-01 | 97.9% | 71.8% |
| 1k1yB02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.57 | 47.0 | 3.51e-01 | 91.6% | 84.1% |
| 1l7aA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 40.0 | 2.81e-01 | 72.6% | 44.3% |
| 4hz9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 44.0 | 4.06e-01 | 83.2% | 96.7% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 46.0 | 4.39e-01 | 86.3% | 84.3% |
| 3dukA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 43.0 | 3.97e-01 | 83.2% | 88.0% |
| 3blzA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 43.0 | 3.98e-01 | 83.2% | 89.5% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.56 | 48.0 | 4.61e-01 | 96.8% | 98.2% |
| 2vckA00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.55 | 47.0 | 3.62e-01 | 91.6% | 70.2% |
| 1kcgC00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.55 | 41.0 | 3.43e-01 | 89.5% | 44.1% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 48.0 | 3.96e-01 | 98.9% | 69.4% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 45.0 | 4.53e-01 | 86.3% | 96.8% |
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 47.0 | 4.11e-01 | 98.9% | 98.7% |
| 1dfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 47.0 | 3.96e-01 | 100.0% | 72.8% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 41.0 | 3.79e-01 | 83.2% | 82.8% |
| 2mj7A00 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.54 | 44.0 | 3.91e-01 | 95.8% | 61.0% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.87e-01 | 83.2% | 88.3% |
| 5tgnA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.97e-01 | 83.2% | 95.4% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 45.0 | 3.31e-01 | 93.7% | 90.1% |
| 3pijA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 42.0 | 2.85e-01 | 86.3% | 60.2% |
| 2zylA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.53 | 46.0 | 3.58e-01 | 97.9% | 85.3% |
| 4ebgA00 | 3.10.450.560 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 4.07e-01 | 83.2% | 82.5% |
| 3lydA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.52 | 41.0 | 3.64e-01 | 86.3% | 60.6% |
| 1zo0A00 | 3.40.630.60 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › | 0.52 | 36.0 | 3.28e-01 | 89.5% | 53.2% |
| 2ikkA00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.52 | 38.0 | 3.41e-01 | 80.0% | 82.9% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 44.0 | 3.90e-01 | 96.8% | 75.4% |
| 2og9A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 36.0 | 3.28e-01 | 72.6% | 97.7% |
| 1ci0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 37.0 | 2.90e-01 | 75.8% | 92.6% |
| 3kuvB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 35.0 | 3.19e-01 | 70.5% | 87.2% |
| 3jvgA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.51 | 40.0 | 3.32e-01 | 85.3% | 79.2% |
| 4n4bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 44.0 | 3.08e-01 | 96.8% | 87.8% |
| 7jvhC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 42.0 | 2.96e-01 | 93.7% | 76.6% |
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 41.0 | 3.52e-01 | 92.6% | 99.4% |
| 3d6xB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 40.0 | 3.48e-01 | 84.2% | 90.0% |
| 3k67A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 37.0 | 3.20e-01 | 78.9% | 83.3% |
| 1a5yA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.50 | 41.0 | 2.97e-01 | 90.5% | 45.1% |
| 4ikcA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.50 | 41.0 | 3.02e-01 | 91.6% | 42.3% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3725709 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.72 | 43.0 | 4.11e-01 | 86.3% | 50.9% |
| 5081581 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.66 | 42.0 | 3.14e-01 | 83.2% | 27.0% |
| 4208434 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.65 | 53.0 | 3.75e-01 | 88.4% | 78.6% |
| 3266046 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.65 | 38.0 | 4.68e-01 | 70.5% | 93.3% |
| 3286246 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 47.0 | 4.63e-01 | 77.9% | 74.0% |
| 3959649 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.64 | 54.0 | 4.29e-01 | 92.6% | 65.8% |
| 5009702 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.62 | 52.0 | 4.54e-01 | 89.5% | 80.7% |
| 3413775 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.62 | 48.0 | 4.13e-01 | 85.3% | 97.5% |
| 3711360 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 47.0 | 3.39e-01 | 82.1% | 45.3% |
| 1930 | 11.8.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like › FB_lectin | 0.61 | 52.0 | 4.53e-01 | 92.6% | 95.2% |
| 4009799 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.61 | 40.0 | 3.95e-01 | 76.8% | 61.0% |
| 3810646 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.61 | 46.0 | 3.05e-01 | 80.0% | 26.3% |
| 3987311 | 7579.1.1.27 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › AXE1 | 0.61 | 43.0 | 3.00e-01 | 73.7% | 45.1% |
| 3998279 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.60 | 47.0 | 4.55e-01 | 86.3% | 85.5% |
| 3663455 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.59 | 46.0 | 3.23e-01 | 82.1% | 27.6% |
| 5057645 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.59 | 47.0 | 4.43e-01 | 86.3% | 91.3% |
| 3734383 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.59 | 40.0 | 2.69e-01 | 70.5% | 34.4% |
| 3851797 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.59 | 51.0 | 4.32e-01 | 98.9% | 72.1% |
| 3818565 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.59 | 46.0 | 3.92e-01 | 85.3% | 51.6% |
| 3633770 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 45.0 | 2.89e-01 | 82.1% | 25.8% |
| 3252530 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.59 | 45.0 | 3.12e-01 | 81.1% | 96.1% |
| 3637283 | 5.1.4.441 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin-link | 0.58 | 46.0 | 3.05e-01 | 84.2% | 24.3% |
| 3730947 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 43.0 | 3.27e-01 | 78.9% | 49.2% |
| 3703242 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.58 | 45.0 | 4.25e-01 | 95.8% | 67.5% |
| 3711273 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.58 | 45.0 | 4.29e-01 | 95.8% | 71.1% |
| 3810743 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 44.0 | 3.22e-01 | 80.0% | 35.5% |
| 3291499 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.57 | 48.0 | 4.26e-01 | 97.9% | 95.3% |
| 143323 | 7579.1.1.27 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › AXE1 | 0.57 | 39.0 | 2.81e-01 | 72.6% | 44.5% |
| 4026208 | 331.9.1.2 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C | 0.56 | 44.0 | 4.14e-01 | 94.7% | 69.6% |
| 3233362 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.56 | 42.0 | 3.80e-01 | 80.0% | 63.0% |
| 164598 | 331.15.1.1 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 › DUF1374 | 0.56 | 46.0 | 4.39e-01 | 86.3% | 84.3% |
| 3663999 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.56 | 48.0 | 3.27e-01 | 93.7% | 85.0% |
| 5015593 | 3111.1.1.0 ↗ | beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain | 0.55 | 44.0 | 4.10e-01 | 85.3% | 86.7% |
| 5069097 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.55 | 47.0 | 4.33e-01 | 94.7% | 73.3% |
| 4498032 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.55 | 47.0 | 3.75e-01 | 98.9% | 80.8% |
| 4961667 | 5084.1.1.45 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF26421 | 0.55 | 47.0 | 4.44e-01 | 96.8% | 97.4% |
| 4274290 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 43.0 | 3.08e-01 | 86.3% | 34.4% |
| 4307607 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.55 | 48.0 | 3.63e-01 | 97.9% | 71.2% |
| 3931614 | 331.9.1.2 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C | 0.55 | 44.0 | 4.14e-01 | 96.8% | 72.2% |
| 3697960 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.55 | 46.0 | 3.99e-01 | 93.7% | 98.7% |
| 3479018 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 40.0 | 2.63e-01 | 80.0% | 28.4% |
| 3695979 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.54 | 42.0 | 3.93e-01 | 84.2% | 67.5% |
| 3715465 | 331.9.1.2 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C | 0.53 | 43.0 | 4.06e-01 | 97.9% | 71.7% |
| 3404834 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.53 | 39.0 | 4.23e-01 | 91.6% | 93.8% |
| 3592947 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.53 | 43.0 | 3.15e-01 | 90.5% | 43.3% |
| 3594682 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.53 | 43.0 | 3.09e-01 | 90.5% | 41.7% |
| 4944596 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.53 | 47.0 | 4.33e-01 | 98.9% | 88.8% |
| 3762363 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.52 | 45.0 | 2.78e-01 | 93.7% | 77.3% |
| 386453 | 881.1.1.6 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Lpp-LpqN | 0.52 | 39.0 | 3.31e-01 | 85.3% | 47.5% |
| 3705440 | 206.1.1.13 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Alpha_kinase | 0.52 | 42.0 | 3.07e-01 | 90.5% | 42.5% |
| 4639080 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.51 | 40.0 | 3.63e-01 | 84.2% | 67.7% |
| 3849724 | 5.1.11.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 | 0.51 | 44.0 | 2.76e-01 | 93.7% | 90.0% |
D2
medium
residues 83-175
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ut7B01 | 2.170.150.80 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › NAC domain | 0.66 | 51.0 | 4.59e-01 | 100.0% | 60.0% |
| 3w15A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 42.0 | 2.86e-01 | 82.8% | 18.0% |
| 1odhA01 | 2.20.25.670 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › GCM domain, large subdomain | 0.66 | 45.0 | 4.97e-01 | 100.0% | 91.5% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.64 | 56.0 | 4.86e-01 | 100.0% | 63.3% |
| 3fyfA00 | 2.40.128.410 | Mainly Beta › Beta Barrel › Lipocalin › | 0.62 | 48.0 | 4.11e-01 | 82.8% | 73.2% |
| 1tu1A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.61 | 50.0 | 4.35e-01 | 100.0% | 57.6% |
| 3h3iA00 | 2.40.128.220 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 46.0 | 4.11e-01 | 84.9% | 71.7% |
| 4aw8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 49.0 | 3.94e-01 | 91.4% | 67.7% |
| 4u13A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 46.0 | 4.38e-01 | 82.8% | 95.4% |
| 2qguA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 45.0 | 4.43e-01 | 81.7% | 97.0% |
| 3g8zA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 46.0 | 4.18e-01 | 84.9% | 89.8% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.58 | 51.0 | 4.34e-01 | 100.0% | 59.6% |
| 1d1jB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.58 | 52.0 | 4.58e-01 | 100.0% | 74.3% |
| 2vbuA01 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.58 | 41.0 | 3.69e-01 | 100.0% | 53.1% |
| 4ec6A00 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 43.0 | 4.15e-01 | 81.7% | 94.5% |
| 5h9kA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 45.0 | 3.84e-01 | 86.0% | 57.8% |
| 1cb8A03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.55 | 36.0 | 3.49e-01 | 89.2% | 56.4% |
| 5i8fA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 49.0 | 4.10e-01 | 100.0% | 72.6% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.54 | 43.0 | 3.81e-01 | 84.9% | 61.8% |
| 2l5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 41.0 | 3.38e-01 | 82.8% | 76.0% |
| 1mo7A00 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.54 | 48.0 | 3.71e-01 | 100.0% | 68.5% |
| 2wqlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 48.0 | 4.06e-01 | 100.0% | 75.7% |
| 3ebkB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 44.0 | 3.64e-01 | 91.4% | 54.9% |
| 3bnvD00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 41.0 | 3.60e-01 | 86.0% | 86.0% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 45.0 | 4.14e-01 | 100.0% | 77.2% |
| 4k15A00 | 2.60.40.3860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 3.78e-01 | 94.6% | 73.2% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.50 | 44.0 | 3.47e-01 | 100.0% | 80.0% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3266884 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.68 | 56.0 | 4.49e-01 | 100.0% | 46.1% |
| 3292384 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.67 | 56.0 | 4.68e-01 | 100.0% | 54.2% |
| 3177232 | 331.9.1.4 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla | 0.66 | 52.0 | 4.82e-01 | 100.0% | 67.0% |
| 3291389 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.66 | 45.0 | 3.78e-01 | 100.0% | 41.9% |
| 3651629 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.63 | 55.0 | 5.22e-01 | 100.0% | 80.9% |
| 5045854 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.63 | 46.0 | 4.89e-01 | 86.0% | 90.0% |
| 3420340 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.62 | 54.0 | 4.51e-01 | 100.0% | 56.1% |
| 3802971 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.62 | 53.0 | 4.54e-01 | 100.0% | 58.0% |
| 3966459 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.62 | 51.0 | 4.46e-01 | 100.0% | 59.3% |
| 2410020 | 881.1.1.4 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB | 0.61 | 53.0 | 4.55e-01 | 100.0% | 59.5% |
| 4928436 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.61 | 55.0 | 4.73e-01 | 100.0% | 63.4% |
| 4941591 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.60 | 52.0 | 4.46e-01 | 100.0% | 60.0% |
| 3469315 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.59 | 50.0 | 3.23e-01 | 100.0% | 19.5% |
| 4974776 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.59 | 50.0 | 4.32e-01 | 100.0% | 59.3% |
| 1298711 | 9.1.1.13 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › ZinT | 0.59 | 51.0 | 3.97e-01 | 93.5% | 79.8% |
| 5029047 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.58 | 51.0 | 4.34e-01 | 100.0% | 59.3% |
| 3592053 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.57 | 47.0 | 3.70e-01 | 91.4% | 81.0% |
| 4941093 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.57 | 51.0 | 4.34e-01 | 100.0% | 60.7% |
| 3607351 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.57 | 51.0 | 4.51e-01 | 100.0% | 68.1% |
| 3923116 | 517.1.1.1 ↗ | beta barrels › CBF-like › Core binding factor beta, CBF › Core binding factor beta, CBF › CBF_beta | 0.57 | 51.0 | 4.54e-01 | 100.0% | 70.8% |
| 3781076 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.56 | 49.0 | 3.88e-01 | 97.8% | 51.8% |
| 3502994 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.56 | 45.0 | 4.07e-01 | 100.0% | 62.3% |
| 3515333 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 44.0 | 4.46e-01 | 84.9% | 94.4% |
| 3433338 | 5.1.5.86 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 | 0.55 | 43.0 | 2.99e-01 | 90.3% | 24.4% |
| 4952370 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 45.0 | 3.77e-01 | 100.0% | 53.5% |
| 3961375 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 49.0 | 3.73e-01 | 100.0% | 44.3% |
| 5016545 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.53 | 47.0 | 3.98e-01 | 100.0% | 61.4% |
| 5062287 | 216.1.1.1 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con | 0.51 | 40.0 | 3.33e-01 | 86.0% | 47.3% |
| 4965901 | 331.2.1.15 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › DUF7845 | 0.50 | 43.0 | 3.63e-01 | 100.0% | 74.9% |