←Back to structures
IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015377
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015377
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-122
Domain cluster:
rep: KT716399.1__ALH46233.1__POR1_28__00028__D1-91
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4trtA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.90 | 81.0 | 8.07e-01 | 100.0% | 92.6% |
| 5agvA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.89 | 80.0 | 7.96e-01 | 100.0% | 91.1% |
| 3pweA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.89 | 81.0 | 8.09e-01 | 100.0% | 93.5% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.88 | 79.0 | 8.19e-01 | 99.2% | 100.0% |
| 3t0pA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.88 | 79.0 | 6.88e-01 | 100.0% | 66.3% |
| 1vpkA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.87 | 78.0 | 7.93e-01 | 100.0% | 95.8% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.87 | 78.0 | 7.86e-01 | 100.0% | 95.0% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.87 | 78.0 | 8.06e-01 | 99.2% | 100.0% |
| 3t0pA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.86 | 75.0 | 6.32e-01 | 100.0% | 57.5% |
| 1vpkA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.86 | 79.0 | 7.72e-01 | 100.0% | 90.6% |
| 2avtB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.86 | 78.0 | 6.81e-01 | 100.0% | 67.4% |
| 5wceA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.85 | 76.0 | 7.66e-01 | 100.0% | 95.0% |
| 2avtA02 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.85 | 77.0 | 6.40e-01 | 100.0% | 58.3% |
| 4tr6A01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.84 | 80.0 | 6.86e-01 | 100.0% | 67.8% |
| 4trtA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.83 | 74.0 | 7.49e-01 | 97.5% | 95.0% |
| 5agvA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.83 | 78.0 | 7.63e-01 | 100.0% | 94.7% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.83 | 73.0 | 5.67e-01 | 100.0% | 46.7% |
| 1jqlA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.82 | 72.0 | 7.30e-01 | 100.0% | 95.0% |
| 5wceA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.81 | 77.0 | 7.51e-01 | 100.0% | 94.6% |
| 4trtA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.80 | 70.0 | 7.11e-01 | 100.0% | 95.0% |
| 3p91A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.80 | 70.0 | 5.42e-01 | 97.5% | 45.7% |
| 6ap4B02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.80 | 75.0 | 7.08e-01 | 100.0% | 90.8% |
| 5aguA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.79 | 74.0 | 7.29e-01 | 100.0% | 95.2% |
| 4rkiA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.79 | 73.0 | 7.13e-01 | 98.3% | 92.3% |
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.77 | 71.0 | 5.41e-01 | 98.3% | 46.9% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.76 | 71.0 | 5.42e-01 | 99.2% | 47.5% |
| 1sxjH02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.76 | 69.0 | 6.82e-01 | 97.5% | 93.8% |
| 1ge8A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.76 | 67.0 | 5.31e-01 | 97.5% | 48.3% |
| 2ix2A01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.74 | 64.0 | 5.15e-01 | 95.0% | 50.2% |
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.74 | 65.0 | 4.95e-01 | 97.5% | 42.8% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.73 | 66.0 | 5.20e-01 | 100.0% | 48.8% |
| 1dmlA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.71 | 65.0 | 4.97e-01 | 99.2% | 44.9% |
| 4rzkA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 37.0 | 4.24e-01 | 76.0% | 78.2% |
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.59 | 40.0 | 4.27e-01 | 97.5% | 80.6% |
| 3mepA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 40.0 | 3.54e-01 | 70.2% | 83.2% |
| 7qs4A01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.55 | 43.0 | 3.79e-01 | 100.0% | 56.4% |
| 2fbeA00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.54 | 41.0 | 3.59e-01 | 100.0% | 52.7% |
| 7qryB01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.53 | 40.0 | 3.75e-01 | 100.0% | 62.7% |
| 1i99I02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 30.0 | 3.08e-01 | 98.3% | 55.6% |
| 2wl1A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.53 | 41.0 | 3.54e-01 | 100.0% | 52.4% |
| 1jdiA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.51 | 41.0 | 3.39e-01 | 86.0% | 77.1% |
| 1e2tA03 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.51 | 33.0 | 3.39e-01 | 80.2% | 66.7% |
| 2lm3A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.51 | 44.0 | 3.71e-01 | 100.0% | 55.6% |
| 3kg6C00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.50 | 41.0 | 3.23e-01 | 90.1% | 88.8% |
ECOD (81)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1871494 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.93 | 85.0 | 8.50e-01 | 100.0% | 94.2% |
| 4650306 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.91 | 83.0 | 8.38e-01 | 100.0% | 95.8% |
| 4251800 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.91 | 82.0 | 8.02e-01 | 100.0% | 87.7% |
| 4480621 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.91 | 81.0 | 8.23e-01 | 100.0% | 94.2% |
| 2392242 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.90 | 76.0 | 7.92e-01 | 100.0% | 93.8% |
| 3387600 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.90 | 81.0 | 8.20e-01 | 100.0% | 95.0% |
| 1549269 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.90 | 81.0 | 8.10e-01 | 100.0% | 93.4% |
| 4102438 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.89 | 81.0 | 8.16e-01 | 100.0% | 95.8% |
| 4860663 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.89 | 81.0 | 7.61e-01 | 100.0% | 82.1% |
| 3015241 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.88 | 80.0 | 8.10e-01 | 100.0% | 96.6% |
| 2987540 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.88 | 78.0 | 7.63e-01 | 100.0% | 86.9% |
| 3015239 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.88 | 76.0 | 7.70e-01 | 100.0% | 92.4% |
| 4379629 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.87 | 78.0 | 7.86e-01 | 100.0% | 94.2% |
| 5979 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.87 | 78.0 | 7.82e-01 | 100.0% | 92.7% |
| 5977 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.87 | 78.0 | 7.86e-01 | 100.0% | 95.0% |
| 3387590 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.87 | 74.0 | 7.58e-01 | 100.0% | 93.0% |
| 4606763 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.87 | 77.0 | 7.73e-01 | 97.5% | 93.3% |
| 4047098 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.87 | 80.0 | 8.06e-01 | 100.0% | 97.5% |
| 4234515 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.86 | 79.0 | 7.96e-01 | 100.0% | 96.7% |
| 4287244 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.86 | 78.0 | 7.90e-01 | 97.5% | 95.8% |
| 4650779 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.86 | 78.0 | 7.75e-01 | 100.0% | 92.8% |
| 1102993 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.86 | 76.0 | 7.17e-01 | 100.0% | 79.6% |
| 4437554 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.86 | 77.0 | 7.63e-01 | 97.5% | 91.2% |
| 4360456 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.86 | 79.0 | 7.68e-01 | 100.0% | 90.0% |
| 4407599 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.86 | 81.0 | 8.07e-01 | 100.0% | 97.6% |
| 4162061 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.85 | 78.0 | 7.82e-01 | 100.0% | 95.1% |
| 2492033 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.85 | 81.0 | 7.65e-01 | 100.0% | 90.7% |
| 4876750 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.85 | 75.0 | 7.44e-01 | 97.5% | 89.6% |
| 2096126 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.85 | 76.0 | 7.58e-01 | 100.0% | 92.6% |
| 4508401 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.85 | 78.0 | 7.77e-01 | 98.3% | 93.6% |
| 426904 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.85 | 76.0 | 7.56e-01 | 100.0% | 92.7% |
| 2476832 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.85 | 80.0 | 7.72e-01 | 100.0% | 90.4% |
| 3291440 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.84 | 68.0 | 7.15e-01 | 100.0% | 92.7% |
| 4460660 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.83 | 79.0 | 7.57e-01 | 100.0% | 91.9% |
| 1871497 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.83 | 72.0 | 7.31e-01 | 98.3% | 92.4% |
| 4500973 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.83 | 75.0 | 7.49e-01 | 100.0% | 93.5% |
| 4315973 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.83 | 78.0 | 7.76e-01 | 100.0% | 96.0% |
| 1549271 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.83 | 74.0 | 7.42e-01 | 97.5% | 92.7% |
| 4336156 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.83 | 74.0 | 7.44e-01 | 95.9% | 94.2% |
| 3015240 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.83 | 75.0 | 7.49e-01 | 100.0% | 94.3% |
| 5074321 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.83 | 74.0 | 7.31e-01 | 97.5% | 90.4% |
| 4463778 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.83 | 74.0 | 7.51e-01 | 100.0% | 95.8% |
| 4542774 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.83 | 73.0 | 7.36e-01 | 96.7% | 94.2% |
| 4083029 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.83 | 75.0 | 7.44e-01 | 100.0% | 92.8% |
| 158230 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.83 | 78.0 | 7.70e-01 | 100.0% | 95.3% |
| 2325189 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.82 | 76.0 | 7.30e-01 | 98.3% | 90.5% |
| 3281112 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.82 | 74.0 | 7.46e-01 | 98.3% | 95.8% |
| 4591776 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.82 | 76.0 | 7.42e-01 | 100.0% | 90.8% |
| 144176 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.82 | 74.0 | 7.42e-01 | 100.0% | 94.4% |
| 4633559 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.82 | 77.0 | 7.53e-01 | 100.0% | 93.8% |
| 4069893 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.81 | 73.0 | 7.29e-01 | 100.0% | 92.8% |
| 3839477 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.81 | 75.0 | 7.42e-01 | 100.0% | 95.2% |
| 2878142 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.81 | 73.0 | 7.25e-01 | 99.2% | 93.5% |
| 159555 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.81 | 73.0 | 7.25e-01 | 100.0% | 92.1% |
| 4372908 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.80 | 69.0 | 6.88e-01 | 97.5% | 88.8% |
| 143428 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.80 | 70.0 | 7.03e-01 | 97.5% | 93.3% |
| 2878147 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.80 | 75.0 | 7.17e-01 | 100.0% | 88.3% |
| 3719143 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.80 | 75.0 | 7.20e-01 | 100.0% | 94.1% |
| 5037344 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.80 | 73.0 | 7.41e-01 | 100.0% | 99.2% |
| 4261491 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.79 | 74.0 | 7.03e-01 | 100.0% | 87.9% |
| 2141304 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.79 | 74.0 | 7.22e-01 | 100.0% | 96.2% |
| 149160 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.78 | 74.0 | 6.96e-01 | 100.0% | 93.6% |
| 4937819 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.78 | 72.0 | 7.12e-01 | 100.0% | 95.2% |
| 5070586 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.78 | 71.0 | 7.08e-01 | 100.0% | 95.2% |
| 4646871 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.77 | 70.0 | 6.94e-01 | 100.0% | 93.6% |
| 4025728 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.77 | 67.0 | 6.87e-01 | 100.0% | 97.4% |
| 3478975 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.77 | 72.0 | 6.90e-01 | 100.0% | 91.9% |
| 5047575 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.76 | 69.0 | 6.90e-01 | 100.0% | 95.2% |
| 4055466 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.76 | 69.0 | 6.91e-01 | 100.0% | 95.2% |
| 5078494 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.76 | 69.0 | 6.84e-01 | 100.0% | 94.4% |
| 3738030 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.76 | 69.0 | 6.62e-01 | 96.7% | 90.4% |
| 4987602 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.76 | 70.0 | 6.95e-01 | 100.0% | 96.0% |
| 4943404 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.76 | 70.0 | 6.90e-01 | 100.0% | 93.8% |
| 5023031 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.74 | 68.0 | 6.73e-01 | 100.0% | 96.0% |
| 3934036 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.74 | 67.0 | 6.77e-01 | 97.5% | 100.0% |
| 3598260 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.74 | 65.0 | 6.43e-01 | 93.4% | 96.0% |
| 3719897 | 227.1.1.18 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_C | 0.72 | 63.0 | 6.25e-01 | 94.2% | 91.2% |
| 3653856 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 41.0 | 3.01e-01 | 81.8% | 95.1% |
| 3843818 | 10.1.1.9 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY | 0.53 | 41.0 | 3.57e-01 | 99.2% | 54.1% |
| 3914813 | 10.1.1.9 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY | 0.52 | 42.0 | 3.70e-01 | 100.0% | 57.8% |
| 3886182 | 10.1.1.66 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PRY | 0.51 | 41.0 | 3.53e-01 | 100.0% | 53.3% |
D2
medium
residues 132-240
Domain cluster:
rep: IMGVR_UViG_3300028564_000083-3300028564-Ga0255344_100350621__D115-222
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vpkA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.80 | 75.0 | 7.08e-01 | 100.0% | 87.5% |
| 4trtA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.79 | 73.0 | 7.06e-01 | 100.0% | 89.9% |
| 2avtB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.78 | 72.0 | 6.10e-01 | 99.1% | 64.0% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.78 | 72.0 | 7.12e-01 | 98.2% | 94.7% |
| 3t0pA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.78 | 73.0 | 6.17e-01 | 100.0% | 63.4% |
| 5wceA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.78 | 73.0 | 6.86e-01 | 100.0% | 89.9% |
| 4trtA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.78 | 72.0 | 6.92e-01 | 100.0% | 88.5% |
| 3pweA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.78 | 72.0 | 6.87e-01 | 99.1% | 88.6% |
| 5agvA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.78 | 71.0 | 6.83e-01 | 100.0% | 87.1% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.77 | 71.0 | 7.04e-01 | 98.2% | 94.7% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.77 | 71.0 | 6.90e-01 | 100.0% | 90.8% |
| 2avtA02 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.77 | 71.0 | 5.75e-01 | 100.0% | 57.3% |
| 5agvA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.76 | 70.0 | 6.57e-01 | 100.0% | 90.8% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.69 | 63.0 | 4.80e-01 | 100.0% | 46.5% |
| 2ix2A01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.69 | 62.0 | 4.87e-01 | 98.2% | 49.8% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.68 | 62.0 | 4.78e-01 | 100.0% | 47.1% |
| 2ej8B00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 37.0 | 3.45e-01 | 100.0% | 52.7% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 27.0 | 3.55e-01 | 98.2% | 84.7% |
| 4j0wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 40.0 | 2.92e-01 | 79.8% | 52.6% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995742 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.82 | 70.0 | 7.05e-01 | 97.2% | 90.0% |
| 5978 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.80 | 75.0 | 7.19e-01 | 100.0% | 91.1% |
| 4650306 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.80 | 74.0 | 7.20e-01 | 99.1% | 90.8% |
| 2492033 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.80 | 74.0 | 6.76e-01 | 100.0% | 86.4% |
| 4480621 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.79 | 73.0 | 7.06e-01 | 99.1% | 89.2% |
| 4194202 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.79 | 74.0 | 7.05e-01 | 100.0% | 88.8% |
| 3387600 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.79 | 73.0 | 7.06e-01 | 99.1% | 90.0% |
| 4876748 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.78 | 73.0 | 6.97e-01 | 100.0% | 87.9% |
| 4569733 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.78 | 73.0 | 6.63e-01 | 100.0% | 89.3% |
| 1549269 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.78 | 72.0 | 6.95e-01 | 100.0% | 89.3% |
| 4234515 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.78 | 71.0 | 6.91e-01 | 99.1% | 91.7% |
| 3015240 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.77 | 72.0 | 6.92e-01 | 100.0% | 91.8% |
| 144176 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.77 | 72.0 | 6.85e-01 | 100.0% | 90.3% |
| 4360456 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.77 | 72.0 | 6.73e-01 | 100.0% | 87.7% |
| 5977 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.77 | 71.0 | 6.86e-01 | 99.1% | 90.0% |
| 1871494 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.77 | 71.0 | 6.85e-01 | 99.1% | 89.3% |
| 4460660 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.76 | 71.0 | 6.58e-01 | 100.0% | 88.1% |
| 3281112 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.76 | 69.0 | 6.64e-01 | 97.2% | 90.0% |
| 4463778 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.76 | 70.0 | 6.80e-01 | 100.0% | 92.5% |
| 4069893 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.75 | 69.0 | 6.61e-01 | 100.0% | 88.8% |
| 3388280 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.75 | 68.0 | 6.60e-01 | 100.0% | 89.2% |
| 3787933 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.74 | 67.0 | 5.89e-01 | 100.0% | 90.0% |
| 3719938 | 227.1.1.17 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_N | 0.73 | 67.0 | 6.14e-01 | 100.0% | 90.7% |
| 4995743 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.72 | 66.0 | 6.40e-01 | 100.0% | 91.7% |
| 3613685 | 227.1.1.17 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_N | 0.72 | 65.0 | 5.99e-01 | 100.0% | 91.4% |
| 4599875 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.70 | 64.0 | 6.25e-01 | 100.0% | 90.8% |
| 3251867 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.70 | 63.0 | 5.94e-01 | 100.0% | 92.3% |
| 4998584 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.69 | 63.0 | 5.87e-01 | 100.0% | 89.6% |
| 5074320 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.66 | 60.0 | 5.65e-01 | 100.0% | 92.3% |
| 3942485 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.54 | 37.0 | 3.65e-01 | 100.0% | 65.0% |
| 3902541 | 319.1.1.5 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS | 0.53 | 36.0 | 3.98e-01 | 76.1% | 90.6% |
| 3484813 | 319.1.1.5 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS | 0.52 | 37.0 | 4.04e-01 | 76.1% | 92.9% |
| 3672926 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 38.0 | 3.06e-01 | 79.8% | 56.9% |
| 4129704 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.50 | 36.0 | 3.35e-01 | 100.0% | 59.0% |
D3
medium
residues 260-379
Domain cluster:
rep: IMGVR_UViG_3300033990_000272-3300033990-Ga0373184_0008483_4516_5451__D198-306
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5wceA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.88 | 76.0 | 7.69e-01 | 100.0% | 90.8% |
| 3t0pA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.87 | 73.0 | 6.10e-01 | 100.0% | 54.9% |
| 1vpkA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.86 | 75.0 | 7.56e-01 | 100.0% | 90.8% |
| 1jqlA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.85 | 73.0 | 7.39e-01 | 100.0% | 90.8% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.84 | 72.0 | 7.45e-01 | 100.0% | 94.7% |
| 4trtA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.84 | 71.0 | 7.10e-01 | 100.0% | 86.9% |
| 2avtA02 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.83 | 74.0 | 6.07e-01 | 100.0% | 55.8% |
| 4trtA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.83 | 73.0 | 7.32e-01 | 100.0% | 91.7% |
| 2avtB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.82 | 72.0 | 6.23e-01 | 100.0% | 63.4% |
| 3p91A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.82 | 70.0 | 5.42e-01 | 100.0% | 44.1% |
| 5agvA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.81 | 68.0 | 6.79e-01 | 100.0% | 85.5% |
| 3pweA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.81 | 69.0 | 6.90e-01 | 100.0% | 87.8% |
| 5aguA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.80 | 73.0 | 7.22e-01 | 100.0% | 90.5% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.80 | 68.0 | 6.83e-01 | 100.0% | 89.2% |
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.79 | 69.0 | 5.18e-01 | 100.0% | 41.3% |
| 2ix2A01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.78 | 65.0 | 5.25e-01 | 98.3% | 48.0% |
| 4rkiA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.78 | 71.0 | 6.90e-01 | 100.0% | 88.5% |
| 1ge8A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.78 | 68.0 | 5.33e-01 | 100.0% | 47.1% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.77 | 67.0 | 5.23e-01 | 100.0% | 45.9% |
| 1vpkA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.77 | 66.0 | 6.52e-01 | 100.0% | 85.2% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.77 | 67.0 | 5.21e-01 | 100.0% | 45.3% |
| 4tr6A01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.76 | 69.0 | 5.95e-01 | 100.0% | 63.9% |
| 6j8yA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.75 | 68.0 | 5.19e-01 | 100.0% | 45.1% |
| 1t6lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.75 | 65.0 | 5.05e-01 | 100.0% | 45.0% |
| 4trtA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.74 | 61.0 | 6.17e-01 | 100.0% | 88.2% |
| 6ap4B02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.73 | 67.0 | 6.39e-01 | 100.0% | 85.8% |
| 5agvA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.73 | 67.0 | 6.51e-01 | 100.0% | 89.3% |
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.60 | 41.0 | 4.41e-01 | 100.0% | 82.5% |
| 2awnC02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 34.0 | 3.96e-01 | 75.0% | 94.9% |
| 4dkmA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.52 | 37.0 | 3.12e-01 | 74.2% | 69.5% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 32.0 | 2.87e-01 | 100.0% | 43.6% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4500973 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.88 | 78.0 | 7.72e-01 | 100.0% | 89.4% |
| 2096126 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.88 | 76.0 | 7.61e-01 | 100.0% | 88.5% |
| 4650779 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.87 | 77.0 | 7.61e-01 | 100.0% | 88.0% |
| 5979 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.86 | 75.0 | 7.45e-01 | 100.0% | 87.8% |
| 4437554 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.86 | 76.0 | 7.49e-01 | 100.0% | 88.0% |
| 426904 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.86 | 73.0 | 7.31e-01 | 100.0% | 87.0% |
| 4379629 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.85 | 73.0 | 7.32e-01 | 100.0% | 88.3% |
| 4876750 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.85 | 74.0 | 7.28e-01 | 100.0% | 86.4% |
| 1102993 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.85 | 73.0 | 6.88e-01 | 100.0% | 76.1% |
| 4606763 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.84 | 73.0 | 7.34e-01 | 100.0% | 90.0% |
| 2878147 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.84 | 76.0 | 7.20e-01 | 100.0% | 82.5% |
| 1871497 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.84 | 70.0 | 7.12e-01 | 100.0% | 88.2% |
| 1549269 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.84 | 71.0 | 7.13e-01 | 100.0% | 87.6% |
| 4650306 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.83 | 72.0 | 7.23e-01 | 100.0% | 90.0% |
| 4480621 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.83 | 70.0 | 7.09e-01 | 100.0% | 88.3% |
| 4287244 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.83 | 73.0 | 7.37e-01 | 100.0% | 92.5% |
| 4633559 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.83 | 75.0 | 7.30e-01 | 100.0% | 88.3% |
| 4336156 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.82 | 73.0 | 7.33e-01 | 100.0% | 92.5% |
| 1871494 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.82 | 70.0 | 7.05e-01 | 100.0% | 88.4% |
| 3387600 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.81 | 69.0 | 6.98e-01 | 100.0% | 89.2% |
| 4234515 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.81 | 71.0 | 7.12e-01 | 100.0% | 90.8% |
| 4047098 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.81 | 71.0 | 7.16e-01 | 100.0% | 91.7% |
| 3081033 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.81 | 63.0 | 6.20e-01 | 81.7% | 92.9% |
| 5074321 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.80 | 69.0 | 6.80e-01 | 100.0% | 87.2% |
| 5977 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.80 | 68.0 | 6.83e-01 | 100.0% | 89.2% |
| 4995028 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.79 | 71.0 | 7.06e-01 | 100.0% | 92.8% |
| 2325189 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.78 | 74.0 | 6.99e-01 | 100.0% | 86.9% |
| 149160 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.78 | 75.0 | 7.01e-01 | 100.0% | 88.7% |
| 3719897 | 227.1.1.18 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_C | 0.75 | 65.0 | 6.47e-01 | 99.2% | 90.4% |
| 4426056 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.74 | 69.0 | 6.25e-01 | 100.0% | 81.3% |
| 3962048 | 227.1.1.15 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PF26035 | 0.72 | 51.0 | 5.59e-01 | 100.0% | 89.0% |
| 3239567 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.69 | 34.0 | 3.62e-01 | 81.7% | 52.4% |
| 3873771 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.69 | 43.0 | 4.47e-01 | 100.0% | 67.3% |
| 4183697 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.67 | 35.0 | 3.18e-01 | 82.5% | 38.1% |
| 3648159 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.64 | 33.0 | 3.27e-01 | 81.7% | 45.4% |
| 3264178 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.57 | 32.0 | 3.03e-01 | 81.7% | 44.3% |
| 3967728 | 274.1.1.34 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF4845 | 0.57 | 34.0 | 3.50e-01 | 81.7% | 60.9% |
| 3783089 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.56 | 32.0 | 3.22e-01 | 100.0% | 56.7% |
| 3366570 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 35.0 | 3.64e-01 | 79.2% | 75.5% |
| 3997968 | 5.1.5.128 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NUP159_NUP214 | 0.50 | 39.0 | 3.00e-01 | 81.7% | 51.4% |