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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015437
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015437
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-79
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pw9C02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.72 | 49.0 | 5.41e-01 | 100.0% | 93.1% |
| 2jx5A00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.66 | 48.0 | 5.04e-01 | 100.0% | 85.5% |
| 2bw2A01 | 3.10.20.420 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain | 0.63 | 40.0 | 4.56e-01 | 100.0% | 89.1% |
| 2vh2B01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.63 | 48.0 | 4.95e-01 | 100.0% | 88.9% |
| 4hwiB01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 48.0 | 4.99e-01 | 100.0% | 94.4% |
| 1t3uA01 | 3.30.160.880 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain | 0.59 | 28.0 | 3.53e-01 | 77.9% | 76.7% |
| 4bzaA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.57 | 44.0 | 4.68e-01 | 100.0% | 97.1% |
| 2qdfA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.55 | 47.0 | 4.62e-01 | 100.0% | 89.2% |
| 6ketA01 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.55 | 37.0 | 2.48e-01 | 71.4% | 97.7% |
| 4jtmA00 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.54 | 35.0 | 3.54e-01 | 100.0% | 64.2% |
| 5yclA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.53 | 38.0 | 4.12e-01 | 89.6% | 92.2% |
| 1vx7X00 | 3.30.1360.210 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.53 | 46.0 | 4.29e-01 | 100.0% | 94.8% |
| 2j42A03 | 3.10.20.110 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 48.0 | 4.43e-01 | 100.0% | 99.0% |
| 3u3wA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.52 | 38.0 | 3.93e-01 | 97.4% | 87.0% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 37.0 | 3.24e-01 | 92.2% | 46.5% |
| 1wruA02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.52 | 34.0 | 3.33e-01 | 100.0% | 60.2% |
| 5efrA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 45.0 | 4.44e-01 | 100.0% | 95.1% |
| 3u5eU00 | 3.30.1360.210 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.51 | 44.0 | 4.09e-01 | 100.0% | 92.0% |
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 38.0 | 3.99e-01 | 83.1% | 93.9% |
| 6j09A02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.50 | 42.0 | 4.22e-01 | 100.0% | 94.9% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4055917 | 221.1.1.23 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF348 | 0.66 | 44.0 | 4.34e-01 | 98.7% | 65.0% |
| 4562405 | 221.1.1.23 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF348 | 0.65 | 43.0 | 4.95e-01 | 100.0% | 96.4% |
| 4555930 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.63 | 48.0 | 5.03e-01 | 100.0% | 91.4% |
| 4101384 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.63 | 48.0 | 4.96e-01 | 100.0% | 90.0% |
| 4482073 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.63 | 47.0 | 4.46e-01 | 100.0% | 66.3% |
| 4648638 | 221.1.1.23 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF348 | 0.63 | 42.0 | 4.76e-01 | 100.0% | 96.4% |
| 3223094 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.63 | 51.0 | 4.63e-01 | 100.0% | 65.7% |
| 3782948 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.62 | 44.0 | 4.84e-01 | 100.0% | 98.3% |
| 3605638 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 54.0 | 5.25e-01 | 100.0% | 87.1% |
| 4526501 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.61 | 45.0 | 4.68e-01 | 100.0% | 88.6% |
| 4407089 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.60 | 46.0 | 4.79e-01 | 100.0% | 90.0% |
| 4209923 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.60 | 48.0 | 4.33e-01 | 100.0% | 63.8% |
| 4027476 | 101.1.1.176 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DEK_C | 0.60 | 46.0 | 4.55e-01 | 89.6% | 78.8% |
| 4079294 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.59 | 45.0 | 4.24e-01 | 100.0% | 68.1% |
| 4186960 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.59 | 44.0 | 4.59e-01 | 100.0% | 90.0% |
| 4145454 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.58 | 43.0 | 4.33e-01 | 100.0% | 77.5% |
| 4607371 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.58 | 45.0 | 4.68e-01 | 100.0% | 91.4% |
| 3265119 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 41.0 | 4.54e-01 | 77.9% | 93.3% |
| 4570617 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.58 | 43.0 | 4.49e-01 | 100.0% | 90.0% |
| 3658173 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 43.0 | 4.65e-01 | 96.1% | 93.8% |
| 3785086 | 870.1.1.1 ↗ | a+b two layers › Hypothetical protein Yml108w › Hypothetical protein Yml108w › Hypothetical protein Yml108w › DUF1892 | 0.57 | 44.0 | 4.30e-01 | 100.0% | 75.3% |
| 3220831 | 221.1.1.115 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › GIPC1_GH1 | 0.56 | 44.0 | 4.59e-01 | 100.0% | 95.7% |
| 3546707 | 221.1.1.181 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF27687 | 0.56 | 48.0 | 4.77e-01 | 100.0% | 93.8% |
| 3180990 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.55 | 44.0 | 4.44e-01 | 100.0% | 90.7% |
| 4234006 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.55 | 42.0 | 4.11e-01 | 100.0% | 76.5% |
| 3602068 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 47.0 | 4.70e-01 | 100.0% | 91.3% |
| 5065981 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 39.0 | 4.35e-01 | 97.4% | 96.7% |
| 3798172 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 48.0 | 4.81e-01 | 100.0% | 95.0% |
| 3450154 | 221.1.1.78 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Coilin_N | 0.54 | 48.0 | 4.60e-01 | 100.0% | 91.1% |
| 1070142 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.52 | 34.0 | 3.43e-01 | 100.0% | 64.2% |
| 4258146 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.52 | 43.0 | 4.32e-01 | 100.0% | 91.3% |
| 3468758 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.51 | 45.0 | 4.06e-01 | 96.1% | 94.3% |
| 3962134 | 221.1.1.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Fer2 | 0.51 | 45.0 | 4.13e-01 | 100.0% | 84.5% |
| 3295128 | 101.1.1.10 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ARID | 0.50 | 41.0 | 3.67e-01 | 93.5% | 72.2% |
| 4115098 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.50 | 41.0 | 4.04e-01 | 100.0% | 87.1% |