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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015456
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015456
Identity
- Kingdom:
- archaea
Quality
68.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 57-117
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rq4A01 | 1.10.10.1700 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Histone-lysine N-methyltransferase | 0.69 | 60.0 | 5.18e-01 | 100.0% | 87.8% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.66 | 55.0 | 5.04e-01 | 95.1% | 80.2% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.65 | 53.0 | 5.33e-01 | 95.1% | 88.7% |
| 4i9oA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.63 | 43.0 | 3.98e-01 | 72.1% | 56.4% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.61 | 53.0 | 3.84e-01 | 100.0% | 81.2% |
| 1q2lA03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.60 | 48.0 | 3.28e-01 | 90.2% | 49.1% |
| 1d8jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 48.0 | 4.45e-01 | 100.0% | 70.4% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.58 | 42.0 | 3.69e-01 | 78.7% | 86.3% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 42.0 | 4.30e-01 | 100.0% | 86.2% |
| 1ldjA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.56 | 46.0 | 3.92e-01 | 100.0% | 59.1% |
| 3t5qG01 | 1.10.150.550 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Arenavirus nucleocapsid protein, head domain | 0.55 | 46.0 | 3.93e-01 | 96.7% | 84.6% |
| 2jaeA03 | 1.20.1440.240 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.51 | 39.0 | 3.36e-01 | 85.2% | 95.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3216079 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.62 | 50.0 | 4.60e-01 | 93.4% | 92.9% |
| 4027618 | 101.22.1.1 ↗ | alpha arrays › HTH › IscX-like (DEPRECATED) › IscX-like (DEPRECATED) › Fe-S_assembly (DEPRECATED) | 0.62 | 54.0 | 5.18e-01 | 100.0% | 88.6% |
| 5017862 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.61 | 44.0 | 3.57e-01 | 78.7% | 63.2% |
| 387703 | 636.1.1.1 ↗ | alpha arrays › SopE-like GEF domain › SopE-like GEF domain › SopE-like GEF domain › IpaB_EvcA | 0.58 | 48.0 | 3.55e-01 | 98.4% | 66.7% |
| None | — | 0.57 | 43.0 | 3.10e-01 | 82.0% | 69.1% | |
| 3703846 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.55 | 41.0 | 4.06e-01 | 86.9% | 98.5% |
| 3406711 | 632.11.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DOCK_N | 0.53 | 40.0 | 3.64e-01 | 82.0% | 92.9% |
| 3513768 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.53 | 46.0 | 2.79e-01 | 100.0% | 28.2% |
| 3412315 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 42.0 | 3.69e-01 | 98.4% | 62.9% |