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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015482
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015482
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-70_145-157
Domain cluster:
representative
CATH (67)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.93 | 64.0 | 7.47e-01 | 79.5% | 95.2% |
| 6cgaC02 | 1.20.58.860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.88 | 59.0 | 6.17e-01 | 83.1% | 74.4% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.88 | 60.0 | 7.01e-01 | 84.3% | 98.3% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.87 | 70.0 | 6.35e-01 | 84.3% | 72.0% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.85 | 50.0 | 5.90e-01 | 84.3% | 84.5% |
| 1yc9A01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.83 | 67.0 | 4.33e-01 | 84.3% | 21.4% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 60.0 | 5.69e-01 | 74.7% | 75.0% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.83 | 66.0 | 6.05e-01 | 84.3% | 69.8% |
| 3vkgB06 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.83 | 67.0 | 4.60e-01 | 84.3% | 28.6% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.82 | 67.0 | 5.99e-01 | 84.3% | 64.2% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 61.0 | 6.23e-01 | 77.1% | 87.7% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.81 | 70.0 | 5.67e-01 | 91.6% | 65.5% |
| 3vbbE01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.80 | 65.0 | 5.63e-01 | 84.3% | 61.3% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 62.0 | 6.15e-01 | 83.1% | 78.4% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.79 | 60.0 | 6.40e-01 | 81.9% | 93.0% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 58.0 | 6.57e-01 | 78.3% | 100.0% |
| 2dw4A03 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.79 | 63.0 | 5.89e-01 | 84.3% | 69.3% |
| 1wleA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.79 | 63.0 | 5.59e-01 | 84.3% | 63.2% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.78 | 58.0 | 6.32e-01 | 78.3% | 94.1% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 62.0 | 5.75e-01 | 84.3% | 79.4% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.78 | 60.0 | 6.52e-01 | 83.1% | 94.4% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.78 | 59.0 | 5.88e-01 | 84.3% | 77.9% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.77 | 63.0 | 6.65e-01 | 85.5% | 96.0% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.77 | 60.0 | 5.61e-01 | 81.9% | 74.3% |
| 3qweA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.77 | 67.0 | 4.66e-01 | 95.2% | 76.5% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 60.0 | 5.28e-01 | 84.3% | 73.0% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 66.0 | 4.83e-01 | 91.6% | 66.5% |
| 3r6nB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 63.0 | 4.50e-01 | 88.0% | 58.5% |
| 1egdA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.76 | 64.0 | 5.33e-01 | 91.6% | 57.4% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 53.0 | 5.99e-01 | 72.3% | 100.0% |
| 3k29A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 59.0 | 4.74e-01 | 84.3% | 75.2% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 53.0 | 5.12e-01 | 74.7% | 75.8% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.74 | 54.0 | 5.96e-01 | 75.9% | 100.0% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 58.0 | 5.51e-01 | 83.1% | 96.9% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.74 | 57.0 | 5.22e-01 | 83.1% | 63.4% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.74 | 56.0 | 6.14e-01 | 80.7% | 100.0% |
| 6v9zA02 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.74 | 58.0 | 3.84e-01 | 84.3% | 22.8% |
| 3i9wA00 | 1.20.58.920 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 61.0 | 4.23e-01 | 90.4% | 37.4% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 51.0 | 5.20e-01 | 84.3% | 75.9% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.73 | 62.0 | 5.06e-01 | 91.6% | 54.4% |
| 2wbiB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.73 | 61.0 | 4.93e-01 | 91.6% | 52.5% |
| 7zd5C01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.73 | 57.0 | 3.83e-01 | 84.3% | 22.4% |
| 4od4A01 | 1.10.357.140 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase | 0.72 | 57.0 | 4.58e-01 | 84.3% | 78.2% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.71 | 64.0 | 4.46e-01 | 98.8% | 81.3% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 55.0 | 5.33e-01 | 83.1% | 84.8% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.70 | 54.0 | 4.01e-01 | 83.1% | 32.2% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.70 | 53.0 | 5.34e-01 | 83.1% | 83.5% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.69 | 60.0 | 4.28e-01 | 96.4% | 69.8% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.68 | 52.0 | 4.82e-01 | 83.1% | 74.8% |
| 3c1yA02 | 1.20.1260.110 | Mainly Alpha › Up-down Bundle › Ferritin › DNA integrity scanning linker region | 0.68 | 62.0 | 5.08e-01 | 100.0% | 82.4% |
| 3jrtA00 | 1.20.120.1060 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 62.0 | 4.85e-01 | 100.0% | 65.7% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 56.0 | 4.26e-01 | 92.8% | 80.1% |
| 5h5mA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.67 | 55.0 | 4.83e-01 | 92.8% | 70.8% |
| 1rfyB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.66 | 50.0 | 4.92e-01 | 80.7% | 77.3% |
| 8e9gJ01 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.65 | 49.0 | 3.89e-01 | 98.8% | 39.5% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 45.0 | 4.99e-01 | 75.9% | 90.8% |
| 1lqsL01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.65 | 49.0 | 4.60e-01 | 79.5% | 97.0% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.65 | 53.0 | 4.35e-01 | 89.2% | 63.3% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.63 | 56.0 | 5.10e-01 | 96.4% | 84.5% |
| 3oqlC00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.63 | 53.0 | 3.85e-01 | 94.0% | 62.0% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.63 | 52.0 | 5.21e-01 | 91.6% | 97.6% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 54.0 | 5.02e-01 | 97.6% | 98.1% |
| 1hciA04 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 54.0 | 4.87e-01 | 96.4% | 80.7% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.61 | 52.0 | 4.58e-01 | 90.4% | 81.2% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.58 | 46.0 | 3.19e-01 | 89.2% | 26.7% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 45.0 | 4.56e-01 | 90.4% | 87.1% |
| 2w3cA02 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 38.0 | 2.68e-01 | 74.7% | 22.4% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4000281 | 192.20.1.0 ↗ | alpha bundles › Long alpha-hairpin › helical hairpin domain in transcriptional anti-activator ExsD › helical hairpin domain in transcriptional anti-activator ExsD | 0.90 | 70.0 | 6.49e-01 | 80.7% | 74.0% |
| 3740547 | 5086.1.1.87 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING | 0.89 | 66.0 | 5.88e-01 | 84.3% | 57.3% |
| 3476064 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.88 | 63.0 | 5.44e-01 | 84.3% | 50.8% |
| 4242072 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.87 | 64.0 | 5.64e-01 | 84.3% | 54.8% |
| 3620978 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.87 | 70.0 | 4.53e-01 | 84.3% | 24.1% |
| 4667859 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.86 | 70.0 | 6.14e-01 | 84.3% | 67.0% |
| 1276361 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.86 | 69.0 | 6.11e-01 | 84.3% | 66.4% |
| 3726529 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.86 | 70.0 | 4.95e-01 | 84.3% | 44.5% |
| 3493417 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.86 | 70.0 | 5.43e-01 | 84.3% | 57.5% |
| 4555586 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.86 | 68.0 | 6.25e-01 | 83.1% | 72.4% |
| 5049284 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.86 | 69.0 | 6.00e-01 | 84.3% | 87.5% |
| 3984078 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.85 | 69.0 | 4.55e-01 | 84.3% | 23.7% |
| 4517020 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 69.0 | 4.27e-01 | 84.3% | 97.3% |
| 4079591 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.85 | 69.0 | 6.15e-01 | 84.3% | 70.0% |
| 3644022 | 6055.1.1.3 ↗ | extended segments › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › Utp11 | 0.85 | 68.0 | 6.25e-01 | 84.3% | 69.5% |
| 4349607 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.85 | 68.0 | 6.13e-01 | 84.3% | 70.0% |
| 4934439 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.85 | 69.0 | 4.15e-01 | 84.3% | 15.1% |
| 3607086 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.85 | 69.0 | 7.07e-01 | 84.3% | 87.5% |
| 3608012 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.85 | 69.0 | 6.86e-01 | 84.3% | 82.4% |
| 4120406 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.85 | 68.0 | 6.11e-01 | 84.3% | 70.0% |
| 4206524 | 605.2.1.3 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N | 0.85 | 68.0 | 6.11e-01 | 84.3% | 70.0% |
| 5065235 | 101.1.2.738 ↗ | alpha arrays › HTH › HTH › winged helix domain › Vir_act_alpha_C | 0.85 | 68.0 | 5.09e-01 | 84.3% | 43.2% |
| 5048093 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.85 | 68.0 | 6.11e-01 | 84.3% | 70.0% |
| 2429105 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.84 | 65.0 | 6.89e-01 | 80.7% | 100.0% |
| 3514909 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.84 | 67.0 | 4.49e-01 | 84.3% | 42.4% |
| 3470751 | 3755.3.1.297 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF9 | 0.84 | 67.0 | 5.28e-01 | 84.3% | 61.3% |
| 3980428 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.84 | 66.0 | 6.97e-01 | 83.1% | 90.7% |
| 4263341 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.83 | 67.0 | 5.90e-01 | 84.3% | 67.0% |
| 3355246 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.83 | 59.0 | 6.03e-01 | 84.3% | 76.2% |
| 5048803 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.83 | 67.0 | 4.22e-01 | 84.3% | 19.2% |
| 3719904 | 148.1.3.13 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 | 0.82 | 66.0 | 4.20e-01 | 84.3% | 20.0% |
| 3964486 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.82 | 66.0 | 5.20e-01 | 84.3% | 43.8% |
| 3389783 | 5030.1.1.0 ↗ | extended segments › Photosystem II reaction center protein L, PsbL › Photosystem II reaction center protein L, PsbL › Photosystem II reaction center protein L, PsbL | 0.82 | 62.0 | 5.71e-01 | 84.3% | 62.9% |
| 3932692 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.81 | 66.0 | 6.40e-01 | 84.3% | 87.8% |
| 3917262 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.81 | 66.0 | 5.45e-01 | 84.3% | 51.9% |
| 3939162 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.81 | 62.0 | 5.38e-01 | 84.3% | 55.0% |
| 3968781 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.81 | 65.0 | 5.28e-01 | 84.3% | 48.3% |
| 3253283 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.81 | 66.0 | 6.23e-01 | 84.3% | 89.5% |
| 4320306 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.81 | 65.0 | 5.84e-01 | 84.3% | 69.1% |
| 3973636 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.81 | 65.0 | 6.79e-01 | 84.3% | 93.3% |
| 3911413 | 148.1.3.13 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 | 0.81 | 65.0 | 4.27e-01 | 84.3% | 23.9% |
| 3563979 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.81 | 61.0 | 4.92e-01 | 84.3% | 44.8% |
| 4009031 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.79 | 61.0 | 6.13e-01 | 83.1% | 97.6% |
| 4174593 | 3922.1.1.248 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF25876 | 0.78 | 62.0 | 6.49e-01 | 84.3% | 93.3% |
| 3215465 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.77 | 65.0 | 5.46e-01 | 89.2% | 82.3% |
| 3944501 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.76 | 59.0 | 6.05e-01 | 83.1% | 86.3% |
| 3967813 | 5086.1.1.93 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_EMRA | 0.76 | 60.0 | 5.12e-01 | 84.3% | 53.8% |
| 4300897 | 5094.1.1.1 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH | 0.76 | 58.0 | 4.99e-01 | 81.9% | 59.2% |
| 3497897 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.75 | 58.0 | 6.22e-01 | 83.1% | 98.6% |
| 3282043 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.74 | 59.0 | 5.87e-01 | 84.3% | 82.4% |
| 4234530 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.74 | 58.0 | 5.19e-01 | 84.3% | 67.0% |
| 3628600 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.74 | 65.0 | 5.22e-01 | 94.0% | 54.7% |
| 4231284 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.74 | 58.0 | 5.26e-01 | 84.3% | 66.4% |
| 3595990 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.73 | 57.0 | 4.46e-01 | 84.3% | 49.7% |
| 3223800 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.72 | 57.0 | 4.61e-01 | 84.3% | 47.1% |
| 4424778 | 605.2.1.3 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N | 0.72 | 56.0 | 5.14e-01 | 84.3% | 69.1% |
| 4147453 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.72 | 56.0 | 5.14e-01 | 84.3% | 66.4% |
| 4042007 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.72 | 56.0 | 5.13e-01 | 84.3% | 69.1% |
| 4057547 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.72 | 56.0 | 5.13e-01 | 84.3% | 69.1% |
| 4359654 | 605.2.1.3 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N | 0.71 | 55.0 | 5.08e-01 | 84.3% | 66.4% |
| 4497098 | 3291.1.1.195 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › H-kinase_dim | 0.71 | 56.0 | 4.94e-01 | 84.3% | 84.2% |
| 4429833 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.71 | 55.0 | 5.07e-01 | 84.3% | 69.1% |
| 4043484 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.71 | 55.0 | 5.04e-01 | 84.3% | 66.4% |
| 3900518 | 109.4.1.374 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FANCI_S4 | 0.70 | 55.0 | 3.94e-01 | 84.3% | 41.2% |
| 4110549 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.70 | 54.0 | 4.98e-01 | 84.3% | 66.4% |
| 3963134 | 605.4.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › DUF202 | 0.70 | 58.0 | 5.38e-01 | 90.4% | 75.2% |
| 4300676 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.70 | 54.0 | 4.96e-01 | 84.3% | 69.1% |
| 5065759 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.69 | 63.0 | 5.48e-01 | 100.0% | 74.4% |
| 3906208 | 604.7.1.12 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA_PH | 0.66 | 58.0 | 4.81e-01 | 97.6% | 97.9% |
| 3274839 | 5001.1.1.32 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Solute_trans_a | 0.63 | 52.0 | 3.61e-01 | 89.2% | 88.5% |
| 3981640 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.62 | 49.0 | 4.83e-01 | 86.7% | 77.8% |
D2
medium
residues 71-144
Domain cluster:
rep: SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00190__D69-145
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.85 | 66.0 | 5.64e-01 | 100.0% | 54.5% |
| 3t5vA00 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.81 | 62.0 | 3.99e-01 | 95.9% | 19.7% |
| 4it4A02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.79 | 63.0 | 5.85e-01 | 100.0% | 69.2% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 72.0 | 6.26e-01 | 100.0% | 75.5% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 70.0 | 6.04e-01 | 100.0% | 73.4% |
| 3vbbE01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.74 | 68.0 | 5.61e-01 | 100.0% | 59.7% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 59.0 | 6.41e-01 | 98.6% | 100.0% |
| 1l8dA00 | 1.10.287.510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.74 | 69.0 | 6.05e-01 | 100.0% | 74.8% |
| 1w27A02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.73 | 65.0 | 4.23e-01 | 100.0% | 22.6% |
| 3whjA00 | 6.10.140.1710 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 68.0 | 5.76e-01 | 100.0% | 64.9% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 63.0 | 5.79e-01 | 94.6% | 75.0% |
| 2wg7A00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.72 | 54.0 | 4.50e-01 | 93.2% | 47.9% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 67.0 | 6.08e-01 | 100.0% | 85.1% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 62.0 | 5.22e-01 | 100.0% | 58.0% |
| 4wpcA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.69 | 62.0 | 4.13e-01 | 100.0% | 26.5% |
| 5nl6A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 58.0 | 5.10e-01 | 100.0% | 63.0% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.69 | 61.0 | 4.25e-01 | 100.0% | 30.6% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.68 | 60.0 | 4.53e-01 | 100.0% | 47.0% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.68 | 61.0 | 5.89e-01 | 98.6% | 100.0% |
| 2j0nB00 | 1.20.1710.10 | Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like | 0.66 | 57.0 | 4.35e-01 | 100.0% | 95.7% |
| 6ui4A01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.66 | 46.0 | 4.33e-01 | 73.0% | 100.0% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.64 | 54.0 | 4.24e-01 | 91.9% | 100.0% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.64 | 48.0 | 4.63e-01 | 91.9% | 70.6% |
| 7b00A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.63 | 53.0 | 3.35e-01 | 97.3% | 79.5% |
| 3onmA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.62 | 28.0 | 2.62e-01 | 74.3% | 31.2% |
| 2gf4A00 | 1.20.1270.110 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 | 0.62 | 44.0 | 4.13e-01 | 90.5% | 61.4% |
| 6l3tA01 | 1.20.1440.80 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain | 0.62 | 53.0 | 3.99e-01 | 100.0% | 37.2% |
| 3mk7C01 | 6.10.280.130 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 53.0 | 4.91e-01 | 98.6% | 91.5% |
| 1nu7D01 | 1.20.120.750 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle domain 1 | 0.60 | 53.0 | 4.38e-01 | 100.0% | 65.9% |
| 6pnjL00 | 1.20.1240.10 | Mainly Alpha › Up-down Bundle › Photosystem 1 Reaction Centre Subunit Xi; Chain: L; › Photosystem I PsaL, reaction centre subunit XI | 0.59 | 52.0 | 4.04e-01 | 97.3% | 60.9% |
| 4at7B01 | 1.10.1410.40 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.58 | 49.0 | 3.97e-01 | 90.5% | 90.2% |
| 3purA03 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 47.0 | 4.16e-01 | 94.6% | 60.9% |
| 1rxqD00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.57 | 51.0 | 3.92e-01 | 100.0% | 68.0% |
| 2yqrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.56 | 48.0 | 4.27e-01 | 93.2% | 84.5% |
| 4uoyA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 43.0 | 3.11e-01 | 85.1% | 74.5% |
| 3v3kD00 | 1.20.1260.90 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.54 | 45.0 | 3.52e-01 | 94.6% | 49.4% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.53 | 45.0 | 3.56e-01 | 98.6% | 83.7% |
| 2a3vA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.53 | 37.0 | 2.67e-01 | 79.7% | 26.1% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.52 | 45.0 | 3.81e-01 | 94.6% | 62.7% |
| 5cofA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.51 | 43.0 | 3.37e-01 | 97.3% | 80.2% |
| 1xl7A02 | 3.30.559.70 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Choline/Carnitine o-acyltransferase, domain 2 | 0.51 | 39.0 | 2.53e-01 | 81.1% | 72.2% |
| 7mdhA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.51 | 43.0 | 3.25e-01 | 91.9% | 82.1% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 38.0 | 3.49e-01 | 83.8% | 60.8% |
| 2dr1A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 40.0 | 3.29e-01 | 89.2% | 46.7% |
| 1k8kE00 | 1.10.1760.10 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › Actin-related protein 2/3 complex subunit 3 | 0.51 | 46.0 | 3.45e-01 | 100.0% | 60.9% |
| 3k8pC01 | 1.20.58.1440 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 42.0 | 3.73e-01 | 93.2% | 63.8% |
| 3bc8A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 43.0 | 3.48e-01 | 93.2% | 60.9% |
| 2ns6A00 | 3.30.930.30 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › | 0.50 | 38.0 | 2.80e-01 | 79.7% | 54.6% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3352092 | 632.1.1.11 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › HYOU1_C | 0.80 | 47.0 | 4.76e-01 | 90.5% | 58.7% |
| 4987009 | 3837.1.1.1 ↗ | alpha bundles › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › DUF6847 | 0.79 | 74.0 | 5.71e-01 | 100.0% | 51.3% |
| 5062471 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.78 | 72.0 | 6.23e-01 | 100.0% | 98.2% |
| 5036014 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.78 | 72.0 | 6.53e-01 | 98.6% | 95.8% |
| 5036394 | 101.1.9.152 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_28 | 0.78 | 73.0 | 5.43e-01 | 100.0% | 51.2% |
| 3637098 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.78 | 73.0 | 5.85e-01 | 100.0% | 60.2% |
| 5060418 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.77 | 72.0 | 6.02e-01 | 100.0% | 78.3% |
| 4981980 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.77 | 72.0 | 6.12e-01 | 100.0% | 82.6% |
| 3787269 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.77 | 73.0 | 6.26e-01 | 100.0% | 72.7% |
| 3628456 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.77 | 71.0 | 5.74e-01 | 97.3% | 83.6% |
| 3631951 | 3755.3.1.355 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Uds1 | 0.77 | 72.0 | 5.69e-01 | 100.0% | 82.9% |
| 3202986 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.76 | 72.0 | 5.87e-01 | 100.0% | 64.0% |
| 3265214 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.76 | 72.0 | 6.03e-01 | 100.0% | 69.6% |
| 4972215 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.76 | 70.0 | 4.97e-01 | 100.0% | 47.6% |
| 3185576 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.76 | 71.0 | 5.19e-01 | 100.0% | 45.6% |
| 3223678 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.76 | 69.0 | 4.96e-01 | 100.0% | 38.5% |
| 5083210 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.74 | 70.0 | 6.00e-01 | 100.0% | 69.1% |
| 3778868 | 1075.4.1.9 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_tran+ABC_membrane | 0.74 | 69.0 | 3.72e-01 | 100.0% | 6.5% |
| 3726210 | 192.15.1.2 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r | 0.74 | 69.0 | 5.08e-01 | 100.0% | 41.1% |
| 3394225 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.74 | 69.0 | 5.82e-01 | 100.0% | 69.6% |
| 3775175 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.73 | 63.0 | 5.70e-01 | 94.6% | 80.0% |
| 3797596 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.73 | 58.0 | 5.71e-01 | 100.0% | 80.0% |
| 3582590 | 3291.1.1.9 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › DUF2371 | 0.73 | 63.0 | 5.32e-01 | 94.6% | 80.8% |
| 3493963 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.72 | 68.0 | 6.05e-01 | 100.0% | 77.0% |
| 4328868 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.72 | 64.0 | 4.33e-01 | 100.0% | 39.3% |
| 3294780 | 3755.3.1.375 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF4079 | 0.72 | 64.0 | 5.09e-01 | 100.0% | 74.0% |
| 3672316 | 611.8.1.0 ↗ | alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 | 0.71 | 65.0 | 4.80e-01 | 100.0% | 42.7% |
| 3221724 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.71 | 65.0 | 4.69e-01 | 100.0% | 47.5% |
| 4021846 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.71 | 65.0 | 4.42e-01 | 100.0% | 30.6% |
| 4978893 | 3755.3.1.632 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin | 0.70 | 62.0 | 5.06e-01 | 100.0% | 89.3% |
| 3594502 | 3559.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 | 0.70 | 61.0 | 4.42e-01 | 91.9% | 38.4% |
| 3881316 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.70 | 62.0 | 4.52e-01 | 97.3% | 37.4% |
| 4944677 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.70 | 62.0 | 5.63e-01 | 100.0% | 77.0% |
| 4008202 | 192.8.1.60 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF2542 | 0.69 | 62.0 | 6.09e-01 | 100.0% | 89.9% |
| 4457710 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.69 | 59.0 | 5.11e-01 | 98.6% | 95.0% |
| 3440506 | 109.4.1.541 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4220 | 0.68 | 57.0 | 3.87e-01 | 93.2% | 27.5% |
| 3264751 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.68 | 54.0 | 4.28e-01 | 85.1% | 79.3% |
| 3481771 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.67 | 63.0 | 5.45e-01 | 100.0% | 68.5% |
| 4083451 | 192.2.1.20 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ASNSD1-SEP | 0.67 | 60.0 | 5.87e-01 | 100.0% | 93.8% |
| 4178886 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.67 | 58.0 | 5.27e-01 | 98.6% | 100.0% |
| 3656255 | 3291.1.1.51 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PGG | 0.66 | 58.0 | 5.03e-01 | 100.0% | 63.6% |
| 4069414 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.66 | 56.0 | 4.27e-01 | 93.2% | 98.2% |
| 3174810 | 630.1.1.4 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › PF28952 | 0.66 | 58.0 | 4.51e-01 | 100.0% | 44.8% |
| 4566016 | 3660.1.1.10 ↗ | alpha bundles › Protein-export membrane protein secG › Protein-export membrane protein secG › Protein-export membrane protein secG › Asp5 | 0.65 | 58.0 | 6.03e-01 | 93.2% | 98.6% |
| 3708691 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.65 | 56.0 | 4.89e-01 | 94.6% | 67.3% |
| 3182290 | 174.1.1.4 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF4267 | 0.65 | 56.0 | 4.63e-01 | 94.6% | 56.2% |
| 3702760 | 3660.1.1.0 ↗ | alpha bundles › Protein-export membrane protein secG › Protein-export membrane protein secG › Protein-export membrane protein secG | 0.65 | 61.0 | 5.21e-01 | 100.0% | 68.2% |
| 3754401 | 109.26.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C | 0.65 | 46.0 | 2.77e-01 | 97.3% | 10.7% |
| 4270827 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.65 | 55.0 | 4.16e-01 | 94.6% | 94.4% |
| 3577241 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.65 | 58.0 | 4.92e-01 | 98.6% | 60.8% |
| 5053992 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.63 | 57.0 | 4.64e-01 | 100.0% | 60.7% |
| 3789844 | 109.30.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin Nup84/Nup107 › Nucleoporin Nup84/Nup107 › Nup84_Nup100 | 0.63 | 55.0 | 3.87e-01 | 100.0% | 32.0% |
| 3260123 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.63 | 53.0 | 3.94e-01 | 97.3% | 36.3% |
| 3584762 | 109.30.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin Nup84/Nup107 › Nucleoporin Nup84/Nup107 › Nup84_Nup100 | 0.63 | 55.0 | 3.18e-01 | 100.0% | 11.3% |
| 3822661 | 7064.1.1.0 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 | 0.62 | 55.0 | 4.11e-01 | 98.6% | 83.8% |
| 3946654 | 517.2.1.0 ↗ | beta barrels › CBF-like › TraF › TraF | 0.62 | 56.0 | 3.77e-01 | 100.0% | 26.9% |
| 3606510 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.61 | 51.0 | 3.20e-01 | 91.9% | 77.8% |
| 4408503 | 192.2.1.43 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › TraD_N | 0.61 | 51.0 | 4.20e-01 | 91.9% | 79.3% |
| 3942067 | 4120.1.1.44 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › TraD_N | 0.59 | 50.0 | 4.39e-01 | 91.9% | 89.1% |
| 3512585 | 5010.1.1.5 ↗ | extended segments › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV › TraD_N | 0.59 | 50.0 | 4.27e-01 | 91.9% | 85.2% |
| 4588825 | 589.1.1.20 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › TraD_N | 0.58 | 49.0 | 4.09e-01 | 91.9% | 75.4% |
| 2337282 | 6170.1.1.1 ↗ | alpha bundles › Kv7 proximal C-terminal Domain › Kv7 proximal C-terminal Domain › Kv7 proximal C-terminal Domain › KCNQ_channel | 0.57 | 49.0 | 4.64e-01 | 95.9% | 83.1% |
| 4985682 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.56 | 51.0 | 4.11e-01 | 98.6% | 84.4% |
| 3025533 | 304.58.1.0 ↗ | a+b two layers › Alpha-beta plaits › FepE-like › FepE-like | 0.56 | 47.0 | 3.09e-01 | 90.5% | 32.8% |
| 3487911 | 3954.1.1.0 ↗ | alpha arrays › Phosphodiesterase 4 upstream conserved regions (UCR) › Phosphodiesterase 4 upstream conserved regions (UCR) › Phosphodiesterase 4 upstream conserved regions (UCR) | 0.55 | 48.0 | 3.14e-01 | 100.0% | 22.5% |
| 4626208 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.55 | 46.0 | 3.69e-01 | 95.9% | 46.9% |
| 3203732 | 632.1.1.29 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › CYAA_C | 0.55 | 43.0 | 4.10e-01 | 87.8% | 71.8% |
| 3181590 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.53 | 39.0 | 3.84e-01 | 83.8% | 72.5% |
| 3791945 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.52 | 45.0 | 3.24e-01 | 100.0% | 36.9% |
| 4573852 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.52 | 39.0 | 3.97e-01 | 95.9% | 80.0% |