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IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015500
Arc-VirIMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015500
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-260
Domain cluster:
rep: IMGVR_UViG_3300000153_000450-3300000153-SI39nov09_135mDRAFT_10035966__D2-250
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03102.21 best | NeuB | 193.6 | 5.40e-57 | 89.3% | 97.1% |
CATH (86)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wqpA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.92 | 90.0 | 8.72e-01 | 100.0% | 94.1% |
| 3g8rA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.91 | 88.0 | 8.75e-01 | 99.2% | 99.6% |
| 1vliA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.88 | 86.0 | 8.08e-01 | 100.0% | 86.3% |
| 2v82A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.84 | 66.0 | 7.36e-01 | 99.6% | 99.5% |
| 6xh5B01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.84 | 64.0 | 7.19e-01 | 98.0% | 99.5% |
| 2yw3E00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.81 | 62.0 | 6.89e-01 | 97.6% | 97.5% |
| 1vhcF00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.80 | 63.0 | 6.88e-01 | 98.0% | 95.8% |
| 3b5vA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.79 | 64.0 | 6.53e-01 | 96.4% | 85.4% |
| 2fliC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.78 | 66.0 | 7.03e-01 | 100.0% | 100.0% |
| 1tqxA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.78 | 66.0 | 7.03e-01 | 99.6% | 100.0% |
| 3na8A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.77 | 67.0 | 6.39e-01 | 99.6% | 78.0% |
| 3lerA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.77 | 67.0 | 6.27e-01 | 99.2% | 76.1% |
| 4fb7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.76 | 65.0 | 6.38e-01 | 100.0% | 83.1% |
| 3tsmA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.76 | 64.0 | 6.36e-01 | 96.8% | 83.5% |
| 6bmaA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.76 | 64.0 | 6.34e-01 | 96.0% | 83.8% |
| 3dxiA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.76 | 70.0 | 6.55e-01 | 98.4% | 80.9% |
| 5afdA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.76 | 66.0 | 6.23e-01 | 100.0% | 76.3% |
| 1hg3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.76 | 64.0 | 6.81e-01 | 97.2% | 98.7% |
| 3n2xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 67.0 | 6.25e-01 | 100.0% | 77.5% |
| 4xkyA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 66.0 | 6.16e-01 | 99.6% | 76.5% |
| 3bofA02 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.75 | 70.0 | 6.91e-01 | 100.0% | 93.8% |
| 3s5nA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 66.0 | 6.20e-01 | 99.6% | 77.6% |
| 5c54G00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 67.0 | 6.17e-01 | 99.6% | 75.6% |
| 6arhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 67.0 | 6.23e-01 | 99.6% | 77.7% |
| 5csrC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 62.0 | 6.68e-01 | 98.4% | 99.1% |
| 1wv2A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 64.0 | 6.74e-01 | 100.0% | 97.4% |
| 2jbmA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 44.0 | 5.67e-01 | 92.9% | 100.0% |
| 2r8wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 66.0 | 6.17e-01 | 99.6% | 77.8% |
| 7mpyA01 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.74 | 68.0 | 6.94e-01 | 100.0% | 98.0% |
| 2b7nA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 44.0 | 5.66e-01 | 92.9% | 100.0% |
| 3igsB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 61.0 | 6.33e-01 | 92.1% | 91.4% |
| 2hmcA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 67.0 | 6.13e-01 | 99.6% | 75.2% |
| 6uczB00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.74 | 71.0 | 6.96e-01 | 100.0% | 100.0% |
| 6ndsA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 69.0 | 6.45e-01 | 99.2% | 85.9% |
| 2bmbA02 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.73 | 70.0 | 6.38e-01 | 100.0% | 98.8% |
| 6omzA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.73 | 70.0 | 6.80e-01 | 100.0% | 97.8% |
| 1y0eA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 60.0 | 6.42e-01 | 92.1% | 96.4% |
| 3axiA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.73 | 69.0 | 5.66e-01 | 100.0% | 97.5% |
| 3eegB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 69.0 | 6.68e-01 | 100.0% | 91.5% |
| 2dh2A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.73 | 68.0 | 6.15e-01 | 98.8% | 97.0% |
| 1ad1A00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.73 | 69.0 | 6.84e-01 | 99.6% | 97.0% |
| 5visB00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.73 | 70.0 | 6.83e-01 | 100.0% | 97.8% |
| 4r9xA00 | 3.20.20.380 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Copper homeostasis (CutC) domain | 0.72 | 62.0 | 6.58e-01 | 95.6% | 100.0% |
| 1m53A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.72 | 68.0 | 5.70e-01 | 100.0% | 98.8% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 68.0 | 6.48e-01 | 99.6% | 90.5% |
| 3bg3A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 67.0 | 6.10e-01 | 99.6% | 82.6% |
| 1nf7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 67.0 | 5.40e-01 | 100.0% | 81.7% |
| 2vefB00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.70 | 68.0 | 6.55e-01 | 100.0% | 98.9% |
| 3gwqA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.70 | 58.0 | 6.08e-01 | 91.7% | 92.7% |
| 1p0kA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 65.0 | 6.07e-01 | 100.0% | 80.4% |
| 1ta3A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.70 | 65.0 | 6.34e-01 | 97.6% | 99.3% |
| 1jcmP00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 52.0 | 5.23e-01 | 97.2% | 74.1% |
| 2ox1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 53.0 | 5.96e-01 | 98.0% | 100.0% |
| 2p10C01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 58.0 | 5.96e-01 | 86.1% | 95.1% |
| 3qz6A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.70 | 63.0 | 6.28e-01 | 94.0% | 91.5% |
| 3ik4A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.69 | 59.0 | 6.04e-01 | 99.6% | 92.5% |
| 1qwgA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 63.0 | 6.31e-01 | 100.0% | 96.0% |
| 1dpmA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.69 | 64.0 | 5.83e-01 | 99.6% | 89.1% |
| 3bw3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 65.0 | 5.78e-01 | 100.0% | 99.1% |
| 2gjlA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 64.0 | 5.85e-01 | 100.0% | 96.9% |
| 1x7fA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 54.0 | 5.69e-01 | 98.4% | 90.8% |
| 1tb3E00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 64.0 | 5.85e-01 | 100.0% | 77.8% |
| 3sr7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 58.0 | 5.65e-01 | 100.0% | 82.1% |
| 4m1bA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.67 | 47.0 | 5.27e-01 | 99.2% | 89.5% |
| 2amxB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.67 | 63.0 | 5.54e-01 | 100.0% | 88.8% |
| 3no3A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.66 | 60.0 | 6.16e-01 | 99.2% | 99.6% |
| 4nicA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 29.0 | 4.27e-01 | 81.7% | 89.7% |
| 2qxyA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 30.0 | 4.24e-01 | 82.5% | 89.9% |
| 4ub9A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.64 | 59.0 | 5.33e-01 | 100.0% | 94.5% |
| 3pnuA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 59.0 | 5.35e-01 | 100.0% | 78.4% |
| 3qq5A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 34.0 | 4.13e-01 | 81.7% | 78.0% |
| 3dmyA02 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.63 | 29.0 | 3.86e-01 | 81.7% | 77.1% |
| 3dugA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 58.0 | 5.48e-01 | 98.8% | 94.0% |
| 4ml9A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 55.0 | 5.32e-01 | 97.6% | 83.3% |
| 2qs8A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.62 | 58.0 | 5.38e-01 | 98.4% | 93.8% |
| 2r8cA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.62 | 58.0 | 5.43e-01 | 99.6% | 94.8% |
| 5dclA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 29.0 | 4.09e-01 | 82.5% | 92.3% |
| 4pg4A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 34.0 | 4.08e-01 | 82.5% | 81.9% |
| 3uc9A00 | 3.40.50.11960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 37.0 | 4.28e-01 | 95.2% | 86.7% |
| 4ms4B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 38.0 | 4.38e-01 | 82.1% | 91.1% |
| 3u31A01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.56 | 34.0 | 4.09e-01 | 94.0% | 89.6% |
| 4ydrA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 34.0 | 4.09e-01 | 82.1% | 92.8% |
| 4c5yA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 50.0 | 4.65e-01 | 100.0% | 93.4% |
| 4ncbA05 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 28.0 | 3.60e-01 | 98.8% | 85.7% |
| 3i83A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 37.0 | 4.29e-01 | 82.1% | 100.0% |
| 3shoA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 29.0 | 3.38e-01 | 96.0% | 75.3% |
ECOD (79)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2429584 | 2002.1.1.109 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NeuB | 0.95 | 90.0 | 8.58e-01 | 100.0% | 85.6% |
| 4098700 | 2002.1.1.109 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NeuB | 0.94 | 92.0 | 8.52e-01 | 100.0% | 87.3% |
| 5028484 | 2002.1.1.109 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NeuB | 0.93 | 91.0 | 8.67e-01 | 100.0% | 90.5% |
| 4954398 | 2002.1.1.109 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NeuB | 0.93 | 91.0 | 8.70e-01 | 100.0% | 92.9% |
| 3393790 | 2002.1.1.109 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NeuB | 0.92 | 90.0 | 8.30e-01 | 100.0% | 88.9% |
| 4930133 | 2002.1.1.109 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NeuB | 0.92 | 90.0 | 8.76e-01 | 100.0% | 94.8% |
| 224542 | 2002.1.1.109 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NeuB | 0.92 | 90.0 | 8.54e-01 | 100.0% | 90.1% |
| 170858 | 2002.1.1.109 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NeuB | 0.91 | 88.0 | 8.64e-01 | 99.2% | 97.0% |
| 165158 | 2002.1.1.49 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldolase | 0.84 | 66.0 | 7.33e-01 | 100.0% | 99.0% |
| 3963436 | 2002.1.1.35 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DAHP_synth_1 | 0.80 | 62.0 | 6.64e-01 | 86.5% | 90.5% |
| 2391104 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.79 | 52.0 | 6.41e-01 | 76.6% | 100.0% |
| 4051019 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.78 | 63.0 | 6.35e-01 | 97.6% | 82.4% |
| 4265682 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.78 | 64.0 | 6.30e-01 | 96.8% | 79.3% |
| 150487 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.78 | 64.0 | 6.46e-01 | 96.4% | 85.4% |
| None | — | 0.78 | 65.0 | 6.40e-01 | 100.0% | 81.5% | |
| None | — | 0.77 | 65.0 | 6.42e-01 | 98.8% | 83.5% | |
| 4327115 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.77 | 64.0 | 6.39e-01 | 99.2% | 83.5% |
| 4927923 | 2002.1.1.3 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM | 0.77 | 65.0 | 6.97e-01 | 97.6% | 100.0% |
| 3729678 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.76 | 65.0 | 6.36e-01 | 99.2% | 81.5% |
| 4963721 | 2002.1.1.3 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM | 0.76 | 65.0 | 6.87e-01 | 98.4% | 98.7% |
| 4082632 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.76 | 72.0 | 6.68e-01 | 99.2% | 85.2% |
| 168781 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.76 | 69.0 | 6.52e-01 | 98.0% | 80.9% |
| None | — | 0.76 | 62.0 | 6.32e-01 | 96.0% | 86.1% | |
| None | — | 0.76 | 65.0 | 6.89e-01 | 98.4% | 99.6% | |
| None | — | 0.76 | 65.0 | 6.31e-01 | 98.0% | 81.5% | |
| 4264332 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.76 | 65.0 | 6.51e-01 | 99.6% | 86.9% |
| 4947226 | 2002.1.1.3 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM | 0.76 | 64.0 | 6.79e-01 | 97.2% | 98.2% |
| 3164095 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.75 | 64.0 | 6.25e-01 | 98.0% | 81.5% |
| 3038068 | 2002.1.1.75 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C | 0.75 | 45.0 | 5.46e-01 | 94.0% | 87.7% |
| 3554654 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.75 | 67.0 | 6.14e-01 | 99.6% | 74.0% |
| 5000376 | 2002.1.1.3 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM | 0.75 | 66.0 | 6.90e-01 | 99.2% | 100.0% |
| 8978 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.75 | 70.0 | 6.91e-01 | 100.0% | 93.8% |
| 5066261 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.75 | 64.0 | 6.64e-01 | 99.2% | 94.1% |
| 3327847 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.75 | 71.0 | 6.58e-01 | 100.0% | 89.7% |
| 4226095 | 2002.1.1.138 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ThiG | 0.74 | 66.0 | 6.63e-01 | 100.0% | 92.2% |
| 3172472 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.74 | 70.0 | 6.39e-01 | 100.0% | 98.8% |
| None | — | 0.74 | 70.0 | 6.92e-01 | 100.0% | 98.5% | |
| 3199169 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.74 | 70.0 | 6.42e-01 | 100.0% | 90.0% |
| None | — | 0.73 | 70.0 | 6.82e-01 | 100.0% | 95.9% | |
| 5073128 | 2002.1.1.75 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C | 0.73 | 45.0 | 5.29e-01 | 94.0% | 85.0% |
| 4270392 | 2002.1.1.75 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C | 0.73 | 45.0 | 5.33e-01 | 94.0% | 86.9% |
| 3183572 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.73 | 68.0 | 6.43e-01 | 96.8% | 89.3% |
| 5044148 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.73 | 70.0 | 6.83e-01 | 100.0% | 96.7% |
| 3959659 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.73 | 69.0 | 6.74e-01 | 98.0% | 97.4% |
| 4120525 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.73 | 69.0 | 6.70e-01 | 100.0% | 97.1% |
| 4454718 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.73 | 70.0 | 6.71e-01 | 100.0% | 91.4% |
| 5067563 | 2002.1.1.75 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C | 0.72 | 37.0 | 4.13e-01 | 70.6% | 60.5% |
| 5002342 | 2002.1.1.75 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C | 0.72 | 44.0 | 5.38e-01 | 94.0% | 92.7% |
| None | — | 0.72 | 66.0 | 6.77e-01 | 97.6% | 100.0% | |
| 3594853 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.71 | 67.0 | 6.66e-01 | 100.0% | 95.4% |
| 4049043 | 2002.1.1.43 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth | 0.71 | 66.0 | 6.70e-01 | 97.2% | 99.6% |
| 4947325 | 2002.1.1.75 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C | 0.71 | 44.0 | 5.24e-01 | 94.0% | 88.6% |
| 4012192 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.71 | 45.0 | 5.36e-01 | 94.0% | 92.4% |
| 3505834 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.71 | 67.0 | 5.08e-01 | 100.0% | 57.5% |
| 3190604 | 2002.1.1.108 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NMO | 0.70 | 66.0 | 5.69e-01 | 100.0% | 96.8% |
| 5070817 | 2002.1.1.90 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR | 0.70 | 65.0 | 6.14e-01 | 98.0% | 96.9% |
| 1381490 | 2002.1.1.86 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_59 | 0.69 | 65.0 | 6.14e-01 | 98.4% | 95.6% |
| 3922918 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.68 | 62.0 | 5.73e-01 | 96.8% | 76.8% |
| 3278836 | 2002.1.1.108 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NMO | 0.68 | 65.0 | 5.99e-01 | 100.0% | 97.1% |
| 4946561 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.68 | 61.0 | 5.65e-01 | 97.2% | 76.1% |
| 2067692 | 2002.1.1.280 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH, NMO | 0.68 | 65.0 | 6.11e-01 | 100.0% | 97.6% |
| 3305705 | 2002.1.1.159 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_hydrolase | 0.67 | 61.0 | 5.79e-01 | 94.4% | 85.9% |
| 5074573 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.67 | 63.0 | 5.44e-01 | 100.0% | 96.1% |
| 3829659 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.67 | 63.0 | 5.56e-01 | 100.0% | 88.6% |
| 3601656 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.66 | 62.0 | 5.43e-01 | 99.6% | 78.8% |
| 3947522 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.66 | 29.0 | 4.00e-01 | 81.7% | 78.5% |
| 3634595 | 2002.1.1.75 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C | 0.64 | 45.0 | 5.01e-01 | 94.0% | 90.0% |
| 3980630 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.63 | 30.0 | 4.10e-01 | 83.3% | 85.4% |
| 4903210 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.63 | 54.0 | 5.56e-01 | 94.4% | 94.2% |
| 2070256 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.60 | 27.0 | 3.91e-01 | 78.2% | 91.2% |
| 5036405 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.58 | 50.0 | 4.92e-01 | 100.0% | 83.6% |
| 3884937 | 2004.1.1.122 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IIGP | 0.58 | 37.0 | 3.77e-01 | 83.3% | 64.2% |
| 3281862 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.58 | 54.0 | 5.07e-01 | 98.8% | 100.0% |
| 3954700 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.57 | 53.0 | 4.76e-01 | 100.0% | 90.1% |
| 3723724 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.57 | 52.0 | 4.77e-01 | 99.6% | 94.6% |
| 3616010 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.56 | 33.0 | 4.03e-01 | 88.9% | 91.6% |
| 4991541 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.55 | 34.0 | 3.99e-01 | 82.9% | 87.6% |
| 3989636 | 7567.1.1.1 ↗ | a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L | 0.53 | 38.0 | 4.15e-01 | 97.2% | 88.3% |
| 3179982 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 36.0 | 3.81e-01 | 97.2% | 80.5% |
D2
high
residues 269-338
Domain cluster:
rep: IMGVR_UViG_3300025122_003952-3300025122-Ga0209434_100007560__D287-343
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08666.18 best | SAF | 27.9 | 4.00e-06 | 84.3% | 90.5% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ameA00 | 3.90.1210.10 | Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | 0.92 | 77.0 | 7.96e-01 | 92.9% | 93.9% |
| 1wvoA00 | 3.90.1210.10 | Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | 0.91 | 81.0 | 7.69e-01 | 98.6% | 82.3% |
| 2wqpA02 | 3.90.1210.10 | Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | 0.91 | 85.0 | 8.45e-01 | 100.0% | 95.9% |
| 3frnA02 | 3.90.1210.10 | Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | 0.88 | 76.0 | 7.70e-01 | 90.0% | 95.6% |
| 1vliA02 | 3.90.1210.10 | Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | 0.88 | 71.0 | 7.33e-01 | 84.3% | 95.4% |
| 3g8rA02 | 3.90.1210.10 | Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | 0.82 | 76.0 | 7.25e-01 | 100.0% | 86.4% |
| 2m2kA00 | 3.30.1150.10 | Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › | 0.54 | 40.0 | 3.32e-01 | 80.0% | 47.3% |
| 4g7xB00 | 3.30.1150.10 | Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › | 0.53 | 42.0 | 3.75e-01 | 88.6% | 64.7% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5078504 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.98 | 83.0 | 8.69e-01 | 90.0% | 95.4% |
| 5028485 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.97 | 84.0 | 8.71e-01 | 91.4% | 96.9% |
| 5032882 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.96 | 89.0 | 9.03e-01 | 98.6% | 100.0% |
| 4942460 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.95 | 88.0 | 8.89e-01 | 98.6% | 98.6% |
| 4159528 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.94 | 88.0 | 8.83e-01 | 100.0% | 98.6% |
| 3587047 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.93 | 87.0 | 8.50e-01 | 100.0% | 93.2% |
| 3393782 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.93 | 76.0 | 8.24e-01 | 85.7% | 100.0% |
| 3388436 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.92 | 86.0 | 8.50e-01 | 100.0% | 94.5% |
| 224541 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.92 | 84.0 | 8.56e-01 | 97.1% | 100.0% |
| 159366 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.91 | 81.0 | 7.69e-01 | 98.6% | 82.3% |
| 1086826 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.91 | 77.0 | 7.86e-01 | 91.4% | 92.5% |
| 3387261 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.91 | 81.0 | 7.99e-01 | 94.3% | 89.2% |
| 3970891 | 70.3.1.18 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › ChapFlgA | 0.90 | 77.0 | 7.98e-01 | 88.6% | 98.5% |
| 4046971 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.90 | 75.0 | 7.82e-01 | 87.1% | 98.5% |
| 4098701 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.90 | 76.0 | 7.49e-01 | 88.6% | 89.0% |
| 3983417 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.90 | 73.0 | 7.56e-01 | 84.3% | 95.4% |
| 3972515 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.90 | 72.0 | 7.78e-01 | 84.3% | 100.0% |
| 1395523 | 70.3.1.18 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › ChapFlgA | 0.90 | 73.0 | 7.61e-01 | 85.7% | 96.9% |
| 4409168 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.89 | 79.0 | 7.96e-01 | 95.7% | 94.3% |
| 5029069 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.88 | 81.0 | 7.90e-01 | 98.6% | 97.3% |
| 4268048 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.88 | 74.0 | 7.64e-01 | 88.6% | 95.4% |
| 185265 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.87 | 75.0 | 7.73e-01 | 90.0% | 97.0% |
| 3962108 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.85 | 76.0 | 7.68e-01 | 97.1% | 94.3% |
| 1005319 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.85 | 74.0 | 7.74e-01 | 92.9% | 100.0% |
| 3840012 | 70.3.1.18 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › ChapFlgA | 0.84 | 67.0 | 7.19e-01 | 84.3% | 100.0% |
| 3386541 | 70.3.1.18 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › ChapFlgA | 0.83 | 72.0 | 7.44e-01 | 92.9% | 98.5% |
| 170859 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.82 | 76.0 | 7.52e-01 | 100.0% | 94.6% |
| 4643272 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.82 | 65.0 | 6.51e-01 | 82.9% | 95.7% |
| 4678813 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.81 | 65.0 | 7.01e-01 | 85.7% | 100.0% |
| 4588640 | 70.3.1.3 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SAF | 0.81 | 73.0 | 7.38e-01 | 100.0% | 97.1% |
| 1005527 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.72 | 63.0 | 5.74e-01 | 97.1% | 75.3% |
| 3990129 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.55 | 44.0 | 3.32e-01 | 94.3% | 41.4% |
| 4939413 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.52 | 28.0 | 3.24e-01 | 82.9% | 72.0% |
| 3398750 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.50 | 37.0 | 3.55e-01 | 78.6% | 90.0% |